Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035854_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:56296566:56304522:-1 gene:Zm00001d035854 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-dioxygenase 1
Sequence

ATGGGTTCAGGTCTCTTCAAGCCTTGTGTTCATCCGGACTTCCGTGTTGTTTTCTCTAAG
ATGTCTTTCGGTGACAAGATTGGCTTTCTATTCGTTCATGCATTTGACAAGAGAAACCTG
TGGCACAAGATGCCTGTTCTGATCGGTTTACTGTACCTGAACACCCGTCGGACCCTCCTC
GAAAAATACAACCTGCTAGCTGTTGGGAGTTCTCATGGTGCTCTGATTGACCCCAAGGAT
CAGTTCATGTACCGCACCGGAGATGGCAAGTACAATGACCCCGATAATGCTGAGGCTGGT
AGCCAATACACATTTTTTGGGAGAAACATGAAGCCGGTTGATCAAGAGTATGAGTTGATG
AGCCCAGATCCATTTGTTGTGGCGACAAAGCTGTTAGCCAGGAGAGAATACAAGGACACA
GGAAAACAGTTCAATATACTAGCAGCTGCATGGATACAGTTCATGGTTCATGACTGGATG
GATCATATGGAGGATACCAAACAGATTGAAATCACAGCTCCAAACGAAGTGGCCAATAAG
TGCCCACTCAAATCATTCAAGTTCTATGCCACAAAAGAACTGCCTACGAATTCTGATGGA
ACAATAAAGACTGGTTACTACAATGTCCGCACAGCTTGGTGGGACGGGAGTGCAATATAT
GGTAATAATGATAAAAAGGCAGAAAAGCTCAGGACTTATGTTGATGGAAAACTAGTGATC
GGAGATGACGGTCTTCTTTTGCATGAGGAGAATGGTGTGGCATTATTGGGCGATGTCCGC
AACAGTTGGGTTGGGGTTTCGATCTTACAAGCTCTTTTTGTTAAGGAACACAATGCAGTG
TGTGATGCAATAAAGGAAGAACATCCCAACCTATCAGACGAAGAATTATATCGATATGCT
AGATTGGTCACTTCTGCTGTCATTGCAAAGGTTCACACTATTGATTGGACTGTGGAGCTT
CTCAAGACTAAGACCATGAGAGCTGGAATGCGCGCAAATTGGTATGGTTTATTGGGTAAG
AAAATAAAAGATACATTTGGTCACATAGGAGGACCGGCATTAGGTGGGCTTGTGGGATTG
AAGAAGCCGATCAACCATGGCGTACCTTATTCTTTGACTGAAGAGTTTACTAGTGTTTAC
AGAATGCACTCCCTATTACCAAGCACTCTTAAGCTCAGGGATCCGACCGGCCAACCCGAT
GCAAATAATTCCCCACCGTACTTGAAAGACGTCGATATTGGAGAGTTGGTTGGTCTCAAG
GGGGAAGGACAACTATCGAAAATAGGCTTTGAAATGGAAATATTATCAATGGGATATCAA
GCTTGTGGTGCACTTGAACTATGGAACTACCCAAGTTTCTTCAGGGACCTCATACCACAA
AATTTGGATGGTACCAATCGATCTGACAGGATCGACCTTGCTGCCCTAGAAGTATACAGA
GATAGGGAGAGAAGTGTACCGAGGTACAATGAGTTCAGGAGAAGACTATTTCTGATTCCA
ATAAAATGCTGGGAGGATCTGACAAGTGACAAGGACGCAATTGAAGCCATAAGAGCAATA
TATGGAGACGATGTAGAGAAATTGGATCTTCTTGTTGGTCTTATGGCAGAGAAAAAAATC
AAGGGGTTTGCCATAAGCGAAACAGCATTCAACATTTTCATTTTAATGGCATCGAGGAGA
CTGGAAGCAGATCGATTTTTTACAAGCAATTTCAATGAGAAAACATACACAAAGAAGGGG
ATGCAATGGGTCAAAACAACTGAAGGCCTACGGGATGTGATCAACCGGCACTACCCTGAA
ATCAGTGCCAAGTGGATGAAGTCCTCTAGTGCTTTCTCTGTGTGGGATGCAGACTACTAG

Peptide Sequence

PEP ID

Zm00001d035854_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:56296566:56304522:-1 gene:Zm00001d035854 transcript:Zm00001d035854_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-dioxygenase 1
Sequence

MGSGLFKPCVHPDFRVVFSKMSFGDKIGFLFVHAFDKRNLWHKMPVLIGLLYLNTRRTLL
EKYNLLAVGSSHGALIDPKDQFMYRTGDGKYNDPDNAEAGSQYTFFGRNMKPVDQEYELM
SPDPFVVATKLLARREYKDTGKQFNILAAAWIQFMVHDWMDHMEDTKQIEITAPNEVANK
CPLKSFKFYATKELPTNSDGTIKTGYYNVRTAWWDGSAIYGNNDKKAEKLRTYVDGKLVI
GDDGLLLHEENGVALLGDVRNSWVGVSILQALFVKEHNAVCDAIKEEHPNLSDEELYRYA
RLVTSAVIAKVHTIDWTVELLKTKTMRAGMRANWYGLLGKKIKDTFGHIGGPALGGLVGL
KKPINHGVPYSLTEEFTSVYRMHSLLPSTLKLRDPTGQPDANNSPPYLKDVDIGELVGLK
GEGQLSKIGFEMEILSMGYQACGALELWNYPSFFRDLIPQNLDGTNRSDRIDLAALEVYR
DRERSVPRYNEFRRRLFLIPIKCWEDLTSDKDAIEAIRAIYGDDVEKLDLLVGLMAEKKI
KGFAISETAFNIFILMASRRLEADRFFTSNFNEKTYTKKGMQWVKTTEGLRDVINRHYPE
ISAKWMKSSSAFSVWDADY

Transcript Sequence

Transcript ID

Zm00001d035854_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:56296566:56304522:-1 gene:Zm00001d035854 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-dioxygenase 1
Sequence

GTGTGCGGGCTTCTTCTTCTCCTACCATTACTTGCTTCAGAGCTCAGCACATCTCCGGTA
GGCCGGGGTCTTTTCTTCTGCCAGCCATGGGTTCAGGTCTCTTCAAGCCTTGTGTTCATC
CGGACTTCCGTGTTGTTTTCTCTAAGATGTCTTTCGGTGACAAGATTGGCTTTCTATTCG
TTCATGCATTTGACAAGAGAAACCTGTGGCACAAGATGCCTGTTCTGATCGGTTTACTGT
ACCTGAACACCCGTCGGACCCTCCTCGAAAAATACAACCTGCTAGCTGTTGGGAGTTCTC
ATGGTGCTCTGATTGACCCCAAGGATCAGTTCATGTACCGCACCGGAGATGGCAAGTACA
ATGACCCCGATAATGCTGAGGCTGGTAGCCAATACACATTTTTTGGGAGAAACATGAAGC
CGGTTGATCAAGAGTATGAGTTGATGAGCCCAGATCCATTTGTTGTGGCGACAAAGCTGT
TAGCCAGGAGAGAATACAAGGACACAGGAAAACAGTTCAATATACTAGCAGCTGCATGGA
TACAGTTCATGGTTCATGACTGGATGGATCATATGGAGGATACCAAACAGATTGAAATCA
CAGCTCCAAACGAAGTGGCCAATAAGTGCCCACTCAAATCATTCAAGTTCTATGCCACAA
AAGAACTGCCTACGAATTCTGATGGAACAATAAAGACTGGTTACTACAATGTCCGCACAG
CTTGGTGGGACGGGAGTGCAATATATGGTAATAATGATAAAAAGGCAGAAAAGCTCAGGA
CTTATGTTGATGGAAAACTAGTGATCGGAGATGACGGTCTTCTTTTGCATGAGGAGAATG
GTGTGGCATTATTGGGCGATGTCCGCAACAGTTGGGTTGGGGTTTCGATCTTACAAGCTC
TTTTTGTTAAGGAACACAATGCAGTGTGTGATGCAATAAAGGAAGAACATCCCAACCTAT
CAGACGAAGAATTATATCGATATGCTAGATTGGTCACTTCTGCTGTCATTGCAAAGGTTC
ACACTATTGATTGGACTGTGGAGCTTCTCAAGACTAAGACCATGAGAGCTGGAATGCGCG
CAAATTGGTATGGTTTATTGGGTAAGAAAATAAAAGATACATTTGGTCACATAGGAGGAC
CGGCATTAGGTGGGCTTGTGGGATTGAAGAAGCCGATCAACCATGGCGTACCTTATTCTT
TGACTGAAGAGTTTACTAGTGTTTACAGAATGCACTCCCTATTACCAAGCACTCTTAAGC
TCAGGGATCCGACCGGCCAACCCGATGCAAATAATTCCCCACCGTACTTGAAAGACGTCG
ATATTGGAGAGTTGGTTGGTCTCAAGGGGGAAGGACAACTATCGAAAATAGGCTTTGAAA
TGGAAATATTATCAATGGGATATCAAGCTTGTGGTGCACTTGAACTATGGAACTACCCAA
GTTTCTTCAGGGACCTCATACCACAAAATTTGGATGGTACCAATCGATCTGACAGGATCG
ACCTTGCTGCCCTAGAAGTATACAGAGATAGGGAGAGAAGTGTACCGAGGTACAATGAGT
TCAGGAGAAGACTATTTCTGATTCCAATAAAATGCTGGGAGGATCTGACAAGTGACAAGG
ACGCAATTGAAGCCATAAGAGCAATATATGGAGACGATGTAGAGAAATTGGATCTTCTTG
TTGGTCTTATGGCAGAGAAAAAAATCAAGGGGTTTGCCATAAGCGAAACAGCATTCAACA
TTTTCATTTTAATGGCATCGAGGAGACTGGAAGCAGATCGATTTTTTACAAGCAATTTCA
ATGAGAAAACATACACAAAGAAGGGGATGCAATGGGTCAAAACAACTGAAGGCCTACGGG
ATGTGATCAACCGGCACTACCCTGAAATCAGTGCCAAGTGGATGAAGTCCTCTAGTGCTT
TCTCTGTGTGGGATGCAGACTACTAGTGCAAAAATAAAGCCCCCCTGCCATATTTTCAAT
TTGTCAAGTTTTATGAAGTATTATTTGTTTACAGAATGATGGTGTTTGTTCAGTGCAAAT
AAATATACTTAATATAAATATGTCATTGTAATATATGTAATAGGATTCATTGTTGAATGA
CACAAGTTGTATGCTTATTTTTTTACAATTTATTGTACATTATTATTTGTTCATTGTAAT
TAAATATGGCTGGGAAAATAAGTAGGAGGAGACCATATGACAT