Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d035802_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:6:50784831:50790437:1 gene:Zm00001d035802 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phenylalanine--tRNA ligase beta subunit cytoplasmic
Sequence	ATGGAATTCTATAAATCAGACATGAAACTGAAGAAATTCTTGCATATAATTGAGAATTCT CCAGTGTACCCAGTTATCTATGATAGCAACAGGACTGTATTATCATTACCTCCTATCATT AATGGCGCACATTCAGCTATCACCCTTGCAACAAGGAATGTCTTTATTGAATGTACAGCT ACTGACCTTACCAAAGCAAATATAGTTCTGAATACAATGGTTACCATGTTCTCTGAATAT TGTGAGACTAAATTTGAAGTGGAACCTGTTGAAGTGATACATCATGATGGAAGGAAAACA GTTTACCCTGATCTTTCATGTTACAAAATGGATGTTTTGTTATCTGACATTCTTGGGCCT ATTGGCATCTCCCAGGACGAGAAACAGGTTGTCTGTCTTTTGAATAAAATGCAACTGCAA GCTGAAAGTCACTCCTTGAAAGGGGAGGCTCGCATTTCAGTGTCTGTTCCTCCAACAAGA AGTGATATTCTGCATGCCCGTGATTTGTCAGAGGACGTTGCTATTGCTTATGGATTCAAC AATGTGCCAAAATCAAAGCCGAAGTGTATGACAATAGGAGGAAGGCAACCATTAAACAGA TTCTCAGATAAAATTCGTGCTGAGGTTGCAAGAGCTGGTTATATGGAGGTGCTCACATTT ATCTTGTCTTCACACGAAGAGAACTTTGACATGTTAAACAGGACAGATGACAAAAGTAAA GCAGTCATTATTGCAAACCCTCGCACTTCTGAATTCGAGGTTGTTAGAACTAGCCTGATG TCGTGTTTATTAAAAACACTGAAACATAATATAGACCATCCAAGACCTATAAAGATTTTT GAAGTTGGTGATGTTGTGATGCTGGACTCGTCACGTGATGTTGGTGCCTCTAATAATCGC AGGCTTGCAGCTTTGTACTGCAATAGGGTTTCTGGATTTGAGGAAATTATGGGATTGGTG GATAGTATTGTCAAAGTTGTCAGAGCTCCACATGTTAACTTTGGCGAGAATTACTATGTA CCTACAGATGAACCTGAGTTCTTCCCGAAAAGACAATGTAAAATTGTGACAAGTGATGGC AAGCAAGTTGGCTACTTAGGAATTGTCCATGCTGAGGTCCTAAGGAAATTTGGCATTCCG GATCCCTGCACTTTCGTTGAGATGGACCTCGAAGCACTGTTGTAA

Peptide Sequence

PEP ID	Zm00001d035802_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:6:50784831:50790437:1 gene:Zm00001d035802 transcript:Zm00001d035802_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phenylalanine--tRNA ligase beta subunit cytoplasmic
Sequence	MEFYKSDMKLKKFLHIIENSPVYPVIYDSNRTVLSLPPIINGAHSAITLATRNVFIECTA TDLTKANIVLNTMVTMFSEYCETKFEVEPVEVIHHDGRKTVYPDLSCYKMDVLLSDILGP IGISQDEKQVVCLLNKMQLQAESHSLKGEARISVSVPPTRSDILHARDLSEDVAIAYGFN NVPKSKPKCMTIGGRQPLNRFSDKIRAEVARAGYMEVLTFILSSHEENFDMLNRTDDKSK AVIIANPRTSEFEVVRTSLMSCLLKTLKHNIDHPRPIKIFEVGDVVMLDSSRDVGASNNR RLAALYCNRVSGFEEIMGLVDSIVKVVRAPHVNFGENYYVPTDEPEFFPKRQCKIVTSDG KQVGYLGIVHAEVLRKFGIPDPCTFVEMDLEALL

Transcript Sequence

Transcript ID	Zm00001d035802_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:50784831:50790437:1 gene:Zm00001d035802 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phenylalanine--tRNA ligase beta subunit cytoplasmic
Sequence	CAGGAGAAAAGCTTCAGAGCCGATAAACTGATGGAATTCTATAAATCAGACATGAAACTG AAGAAATTCTTGCATATAATTGAGAATTCTCCAGTGTACCCAGTTATCTATGATAGCAAC AGGACTGTATTATCATTACCTCCTATCATTAATGGCGCACATTCAGCTATCACCCTTGCA ACAAGGAATGTCTTTATTGAATGTACAGCTACTGACCTTACCAAAGCAAATATAGTTCTG AATACAATGGTTACCATGTTCTCTGAATATTGTGAGACTAAATTTGAAGTGGAACCTGTT GAAGTGATACATCATGATGGAAGGAAAACAGTTTACCCTGATCTTTCATGTTACAAAATG GATGTTTTGTTATCTGACATTCTTGGGCCTATTGGCATCTCCCAGGACGAGAAACAGGTT GTCTGTCTTTTGAATAAAATGCAACTGCAAGCTGAAAGTCACTCCTTGAAAGGGGAGGCT CGCATTTCAGTGTCTGTTCCTCCAACAAGAAGTGATATTCTGCATGCCCGTGATTTGTCA GAGGACGTTGCTATTGCTTATGGATTCAACAATGTGCCAAAATCAAAGCCGAAGTGTATG ACAATAGGAGGAAGGCAACCATTAAACAGATTCTCAGATAAAATTCGTGCTGAGGTTGCA AGAGCTGGTTATATGGAGGTGCTCACATTTATCTTGTCTTCACACGAAGAGAACTTTGAC ATGTTAAACAGGACAGATGACAAAAGTAAAGCAGTCATTATTGCAAACCCTCGCACTTCT GAATTCGAGGTTGTTAGAACTAGCCTGATGTCGTGTTTATTAAAAACACTGAAACATAAT ATAGACCATCCAAGACCTATAAAGATTTTTGAAGTTGGTGATGTTGTGATGCTGGACTCG TCACGTGATGTTGGTGCCTCTAATAATCGCAGGCTTGCAGCTTTGTACTGCAATAGGGTT TCTGGATTTGAGGAAATTATGGGATTGGTGGATAGTATTGTCAAAGTTGTCAGAGCTCCA CATGTTAACTTTGGCGAGAATTACTATGTACCTACAGATGAACCTGAGTTCTTCCCGAAA AGACAATGTAAAATTGTGACAAGTGATGGCAAGCAAGTTGGCTACTTAGGAATTGTCCAT GCTGAGGTCCTAAGGAAATTTGGCATTCCGGATCCCTGCACTTTCGTTGAGATGGACCTC GAAGCACTGTTGTAATGCAGTCAACCTGAAACAAAGGAATGCTTGAAGCTGATACCTCAT ACCTGCCACATATTGGTTTTGTTCGTAAGCATGGTGGGGTACCAGCAAGAAGTGCATATT ACCCAAGCTGCAGTATCTCGATGTACTTCTCAATTGCATTGGATTTTGCTGTGGGAAAAA AGGGTACAACGATACAGCAAATACCCAGCCTAATTTTTGTGTTAGGGATTATGTTTGCAT TGTAAGGGCTTATTCCTATCCAACTTTCTATGAAAAGTGTACCGTACATCCTTTTGTAAA CCATCGCGCGTCCAAAAGTTATTTCTCAACTCTTGTCACCTCCACATGAGGTCACCATGA TGTAAAGCAGGTTCAGAATATTAGACCTCTAATATCTCCTTGTGTTTGTGAATGGCATTA AAATTTGACATTAAGGATTGTTTGGTTTATAAAGACTAATTTTAGT