Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035773_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:6:47325021:47328306:1 gene:Zm00001d035773 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGATCCTGACGACCTCGGCCGCCGCCTCGCCGCGGTCGCCGTATCCGAGTCTCCT
ACCGCCGCCGCGGCTGCGCTGGAGAGCAGCAACAACAACCTGTTCCAGGTGATGCGCGCC
GTGGAGGACGCGGAGGCCACCATCCGCCAGCAGCTGGAGGAGAACAGCCGGTTGAAGGAC
GAGCTGATGCTCAAGACGCGGGAGCTCCACAGAATTAGGTCAGAAGCCACAGACCAAGCT
TCCTCTCATGGGATCCGTATCCATCAGGATCGCGCTCTTGGTGCCCACACAGACACCTCC
TCCACTGCTCCCATCAGGACTACCGCTACAGCAGCAGAGGCCTTCGAATGGGGAGCTGGG
GATGCCGGCATCAACCACAAGTACCTTGAGGCCAACCAGGCTAATGGAATTCCCCGTAAA
TCACCGAGCGCTCCCGATAGCGCTTTCCCATCTCAGCTATCTACCCCGTCTTCGCGATCC
CTTTCACCAACTAGGCACCACAAAGAAACAGACTATGATTCTAGGCTCAACTTATCCGGA
CAAGGCGCACTGCCTGTTTCAGACCTCAACTCAAACGTCGTCATCTGGAAGCAGGATCTC
CTTGTTAAGGTCAAAGAACAAGGGGAGGAGATTGCACAGCTGAGAAGGCATCTTTCTGAC
TACTCTGTCAAGGAGGCCCAAATACTTAATGAGAAACATGTCCTGGAAAAACGCATTGCA
TATATGCGCATGGCATTTGATCAGCAGCAGCAAGATCTGGTTGATGCTGCATCGAAAGCT
TTGTCCTACAGACAGGATATTATCGAAGAAAACATCCGTCTTACATATGCATTGCAGGCA
GCACATCAAGAGAGATCTACATTCGTATCTTCTTTATTGCCTCTTCTATCAGAATATAAC
CTTCAGCCTCCTGTTCTTGATGCTCAGTCTATTGTTAGCAATCTGAAGGTTCTGTTTAAG
CATTTGCAAGAAAAACTTATTATTACTGAGGAGAAGCTGAAGGAATCACAATACCAGATT
ACTCCTTGGCATGCTGAATCTTCAAATAATACAAGTGCTGCTGCACAGTCGCCTTCTCAT
CCTCCTGGAAATGCATTGATCAAAGCCAACCTTGACATTGTGCCCCAGCAAGCATATTCT
CATGTACATTCTCCAGTTTCTTCTCCTGTTCAAACTAGGCGTGACTGGGATTTGTTAGGG
AATGAAAATCGTCAGGTCATTCGAAGTGAGGTTGCCACAACAAGTGCAGAGCATGATAAT
GTTGGGAGGACCTCTCCTTCAACCAGGTTGCTGGTGGTTACTTCAAAAATTCAATAG

Peptide Sequence

PEP ID

Zm00001d035773_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:6:47325021:47328306:1 gene:Zm00001d035773 transcript:Zm00001d035773_T005 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MADPDDLGRRLAAVAVSESPTAAAAALESSNNNLFQVMRAVEDAEATIRQQLEENSRLKD
ELMLKTRELHRIRSEATDQASSHGIRIHQDRALGAHTDTSSTAPIRTTATAAEAFEWGAG
DAGINHKYLEANQANGIPRKSPSAPDSAFPSQLSTPSSRSLSPTRHHKETDYDSRLNLSG
QGALPVSDLNSNVVIWKQDLLVKVKEQGEEIAQLRRHLSDYSVKEAQILNEKHVLEKRIA
YMRMAFDQQQQDLVDAASKALSYRQDIIEENIRLTYALQAAHQERSTFVSSLLPLLSEYN
LQPPVLDAQSIVSNLKVLFKHLQEKLIITEEKLKESQYQITPWHAESSNNTSAAAQSPSH
PPGNALIKANLDIVPQQAYSHVHSPVSSPVQTRRDWDLLGNENRQVIRSEVATTSAEHDN
VGRTSPSTRLLVVTSKIQ

Transcript Sequence

Transcript ID

Zm00001d035773_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:47325021:47328306:1 gene:Zm00001d035773 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGCTGTGGCCGGGCAGCCGTTTCCCCTCCCCTTCCCTCTCCGCTCCCTCCAGAGTCTAC
TGTAGCGCAGTGCCGTAGGGTTTCGCGTCCTATCCTTCCTCGCATCCTCCATGGCCGATC
CTGACGACCTCGGCCGCCGCCTCGCCGCGGTCGCCGTATCCGAGTCTCCTACCGCCGCCG
CGGCTGCGCTGGAGAGCAGCAACAACAACCTGTTCCAGGTGATGCGCGCCGTGGAGGACG
CGGAGGCCACCATCCGCCAGCAGCTGGAGGAGAACAGCCGGTTGAAGGACGAGCTGATGC
TCAAGACGCGGGAGCTCCACAGAATTAGGTCAGAAGCCACAGACCAAGCTTCCTCTCATG
GGATCCGTATCCATCAGGATCGCGCTCTTGGTGCCCACACAGACACCTCCTCCACTGCTC
CCATCAGGACTACCGCTACAGCAGCAGAGGCCTTCGAATGGGGAGCTGGGGATGCCGGCA
TCAACCACAAGTACCTTGAGGCCAACCAGGCTAATGGAATTCCCCGTAAATCACCGAGCG
CTCCCGATAGCGCTTTCCCATCTCAGCTATCTACCCCGTCTTCGCGATCCCTTTCACCAA
CTAGGCACCACAAAGAAACAGACTATGATTCTAGGCTCAACTTATCCGGACAAGGCGCAC
TGCCTGTTTCAGACCTCAACTCAAACGTCGTCATCTGGAAGCAGGATCTCCTTGTTAAGG
TCAAAGAACAAGGGGAGGAGATTGCACAGCTGAGAAGGCATCTTTCTGACTACTCTGTCA
AGGAGGCCCAAATACTTAATGAGAAACATGTCCTGGAAAAACGCATTGCATATATGCGCA
TGGCATTTGATCAGCAGCAGCAAGATCTGGTTGATGCTGCATCGAAAGCTTTGTCCTACA
GACAGGATATTATCGAAGAAAACATCCGTCTTACATATGCATTGCAGGCAGCACATCAAG
AGAGATCTACATTCGTATCTTCTTTATTGCCTCTTCTATCAGAATATAACCTTCAGCCTC
CTGTTCTTGATGCTCAGTCTATTGTTAGCAATCTGAAGGTTCTGTTTAAGCATTTGCAAG
AAAAACTTATTATTACTGAGGAGAAGCTGAAGGAATCACAATACCAGATTACTCCTTGGC
ATGCTGAATCTTCAAATAATACAAGTGCTGCTGCACAGTCGCCTTCTCATCCTCCTGGAA
ATGCATTGATCAAAGCCAACCTTGACATTGTGCCCCAGCAAGCATATTCTCATGTACATT
CTCCAGTTTCTTCTCCTGTTCAAACTAGGCGTGACTGGGATTTGTTAGGGAATGAAAATC
GTCAGGTCATTCGAAGTGAGGTTGCCACAACAAGTGCAGAGCATGATAATGTTGGGAGGA
CCTCTCCTTCAACCAGGTTGCTGGTGGTTACTTCAAAAATTCAATAGGATGTGTTCTTAG
CTATTTTTTGCCGTTTCACAATTACAATAATTTCACTATGTACATCCCATTTTTGCCACA
TGATGAAAATCTTAATAGTAGTATTAGTCTAGCTAGCCCCCTTTTCTTCTTTGTTCTGAT
GTAATTAATTTTTGTACAGTATTTTGAAACCATTTCTCCAACTATGATTGTTCTAGGCTT