Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d035757_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:6:45722640:45725620:-1 gene:Zm00001d035757 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar sorting protein 39
Sequence	ATGCCCACCTCCTCCACTAACCCCAGCACTGAGTTCCTCTACCTCGGAACCCTCGCCACC CCGCCGCCGCCGGGGCCGCAGCACCCCGGGACAAGTTCCAGTCTACGCCCTGGCTCGCCG GAGCTCCGCCCTCTGCCTCCGCTTCCGCGCGTCGGCCCGCCGTCCGGCGAGTTCTTATCC CGCAGCTCCGCTTCCGACCCCAGCACCGTGCCTCCCGCCGCCGCTGCCGATGCCTCGTCG TCCTCGCTCTCTCCCTCCTCGCCGTCGGCATCCTCGCCCACGCTCGGCTCTAGCCCCGTC CATTTCCGCCCGCCGACCATCCCCCAGCCGCGTGGCCGAGCCCCCAATCCCTCGCCGCCT AAACGGAGGCCGTCGCCGCCCAAGGGTGCTGCGGAGCCAGTGGCGGCGCACGGGTGGAAC CCCTTCGTGCCGCTGCCGCCGCGACCAGCTGTGGCTTCATCAGATGATGGTGACTCTGAT CAGATGATGGACCTGCGCAAGTCGCGGCCTTTGCACTCGGACAAGCTCAAGCCCGGCTCT TTGCACATGAAGGACGAGGTGATCCAGCTATACCTCAACAATTCGGCAGCAGTTGCGGCA CCAAGGGAGGTGTGTTTGCTTGGTGCCCTCAGGTGTCATGGCATCGGGATGATTGTAGGA GCATTGGGAGTTTCCAAGGAGCAACTGAAGGATGCACTCTTGGAAGGTAATGTACATGGT TTGGGAGTGGAAGCCTTGCAGATGCTCACTCAGATGGTGCTCAGCAATGAAGAAGAGCTC AAGATCAAATATTTCAAGGATGACTCCCTGAACAGACTTTGCCCAGTTGATGTTTTTTTG AAGGCAATGCTGGATGTTCCATTTGTGTTCAAGAGAGTAGATGCCATGCTTTACATTGCC AGCTTCTATTTGGAGATCAATCGGCTGAGAATGTCGTATGCTACTCTTGAGGGGGCTTGC CAGGAGATGAGAAGCAGCAGGCTGTTCCACAAAGTCCTTGAGGCTGTTGTGAATTTCGGC AATTTCATGAGCACCAATTCGGGGTCTCCAAGTTCAAAAGGCTTGGAGCCAAACACTGTT CTGAAGATAGCTGATGTGAAAGGAGCTGATGGGAAGGCTGCTCTCATGCAGTTCATTGTC CAGGAAATTGTGAAACCTGAAGGATATGATGTGATGCAGCATGGTTCAGGTGCATGCAAG ATGAGCACAAACACTCTGCAGTGTGATGCCGAGTGCAGGAAGCATGGCCTTGAGGTTGTT GCCAAACTTGCAGCCCAGCTGAGCAACACCAAGAAAGCCGCCTCCATTGACATAAAAAGG CTGAGCCAAAGCGTGTCAGAGCTTGGAATGGGGCTTGGGAAGGTCCACGACGTGGTGAGG CTGAACAGCATGGTTACATCTGTTGATAGCGCTCGGCGTTTCCACAATAGCATGAGCACA TTTCTAAGGCACGCCGAGGAGGAGATCCTGAAGCTCCAGTCCCAGGAGAGCATCTGCTTG TCATCAGTGAAGGAGATGGCGGAGTGGTTTATTGGGGAGTCAGTCAACGATGAAGCTCAC ATGTTCAGAATCTTTGCTGGAGTGAAGGAGTTCCTAGCTATGCTCGATCATATCTGCAAG GAGGCTGGGGAGGTGAGCAGCAACAATTGGGTCGGCGCGACAACGGCGAGCTGGATGGCT GCACCCATGGGGATGATGCCTTAA

Peptide Sequence

PEP ID	Zm00001d035757_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:6:45722640:45725620:-1 gene:Zm00001d035757 transcript:Zm00001d035757_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar sorting protein 39
Sequence	MPTSSTNPSTEFLYLGTLATPPPPGPQHPGTSSSLRPGSPELRPLPPLPRVGPPSGEFLS RSSASDPSTVPPAAAADASSSSLSPSSPSASSPTLGSSPVHFRPPTIPQPRGRAPNPSPP KRRPSPPKGAAEPVAAHGWNPFVPLPPRPAVASSDDGDSDQMMDLRKSRPLHSDKLKPGS LHMKDEVIQLYLNNSAAVAAPREVCLLGALRCHGIGMIVGALGVSKEQLKDALLEGNVHG LGVEALQMLTQMVLSNEEELKIKYFKDDSLNRLCPVDVFLKAMLDVPFVFKRVDAMLYIA SFYLEINRLRMSYATLEGACQEMRSSRLFHKVLEAVVNFGNFMSTNSGSPSSKGLEPNTV LKIADVKGADGKAALMQFIVQEIVKPEGYDVMQHGSGACKMSTNTLQCDAECRKHGLEVV AKLAAQLSNTKKAASIDIKRLSQSVSELGMGLGKVHDVVRLNSMVTSVDSARRFHNSMST FLRHAEEEILKLQSQESICLSSVKEMAEWFIGESVNDEAHMFRIFAGVKEFLAMLDHICK EAGEVSSNNWVGATTASWMAAPMGMMP

Transcript Sequence

Transcript ID	Zm00001d035757_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:45722640:45725620:-1 gene:Zm00001d035757 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar sorting protein 39
Sequence	GGCCAACATCTCCACCCTCGTCGCCCCGACCCCGCGCGCCTCCGGCTCCCGCCGCTTCCC CGTGCTCCAGACGCTGCTGCTCTCCTTGCTCTCCCTCTGCCTCATCCTCCTCTCAGCGCT CCTCTCCATCCACCTCGTCCGCCGCCTCCGCCACCGTGGTGGCGCCGCGGCATCCTCCCC CTCCGCTGCCCAGCGCCGCTCCGCAAGTAACCACCACCAAGACGACGACAACGACGACGG GGACGAGGAGGGCCGCAGCCTCAAGCCGCCACCAATGCCCACCTCCTCCACTAACCCCAG CACTGAGTTCCTCTACCTCGGAACCCTCGCCACCCCGCCGCCGCCGGGGCCGCAGCACCC CGGGACAAGTTCCAGTCTACGCCCTGGCTCGCCGGAGCTCCGCCCTCTGCCTCCGCTTCC GCGCGTCGGCCCGCCGTCCGGCGAGTTCTTATCCCGCAGCTCCGCTTCCGACCCCAGCAC CGTGCCTCCCGCCGCCGCTGCCGATGCCTCGTCGTCCTCGCTCTCTCCCTCCTCGCCGTC GGCATCCTCGCCCACGCTCGGCTCTAGCCCCGTCCATTTCCGCCCGCCGACCATCCCCCA GCCGCGTGGCCGAGCCCCCAATCCCTCGCCGCCTAAACGGAGGCCGTCGCCGCCCAAGGG TGCTGCGGAGCCAGTGGCGGCGCACGGGTGGAACCCCTTCGTGCCGCTGCCGCCGCGACC AGCTGTGGCTTCATCAGATGATGGTGACTCTGATCAGATGATGGACCTGCGCAAGTCGCG GCCTTTGCACTCGGACAAGCTCAAGCCCGGCTCTTTGCACATGAAGGACGAGGTGATCCA GCTATACCTCAACAATTCGGCAGCAGTTGCGGCACCAAGGGAGGTGTGTTTGCTTGGTGC CCTCAGGTGTCATGGCATCGGGATGATTGTAGGAGCATTGGGAGTTTCCAAGGAGCAACT GAAGGATGCACTCTTGGAAGGTAATGTACATGGTTTGGGAGTGGAAGCCTTGCAGATGCT CACTCAGATGGTGCTCAGCAATGAAGAAGAGCTCAAGATCAAATATTTCAAGGATGACTC CCTGAACAGACTTTGCCCAGTTGATGTTTTTTTGAAGGCAATGCTGGATGTTCCATTTGT GTTCAAGAGAGTAGATGCCATGCTTTACATTGCCAGCTTCTATTTGGAGATCAATCGGCT GAGAATGTCGTATGCTACTCTTGAGGGGGCTTGCCAGGAGATGAGAAGCAGCAGGCTGTT CCACAAAGTCCTTGAGGCTGTTGTGAATTTCGGCAATTTCATGAGCACCAATTCGGGGTC TCCAAGTTCAAAAGGCTTGGAGCCAAACACTGTTCTGAAGATAGCTGATGTGAAAGGAGC TGATGGGAAGGCTGCTCTCATGCAGTTCATTGTCCAGGAAATTGTGAAACCTGAAGGATA TGATGTGATGCAGCATGGTTCAGGTGCATGCAAGATGAGCACAAACACTCTGCAGTGTGA TGCCGAGTGCAGGAAGCATGGCCTTGAGGTTGTTGCCAAACTTGCAGCCCAGCTGAGCAA CACCAAGAAAGCCGCCTCCATTGACATAAAAAGGCTGAGCCAAAGCGTGTCAGAGCTTGG AATGGGGCTTGGGAAGGTCCACGACGTGGTGAGGCTGAACAGCATGGTTACATCTGTTGA TAGCGCTCGGCGTTTCCACAATAGCATGAGCACATTTCTAAGGCACGCCGAGGAGGAGAT CCTGAAGCTCCAGTCCCAGGAGAGCATCTGCTTGTCATCAGTGAAGGAGATGGCGGAGTG GTTTATTGGGGAGTCAGTCAACGATGAAGCTCACATGTTCAGAATCTTTGCTGGAGTGAA GGAGTTCCTAGCTATGCTCGATCATATCTGCAAGGAGGCTGGGGAGGTGAGCAGCAACAA TTGGGTCGGCGCGACAACGGCGAGCTGGATGGCTGCACCCATGGGGATGATGCCTTAAGC CGCTGGAGCTGTCTTGGCAAAATCTGTAGCTACCCTTTTTGTAGAATATTTCATATCAAG CTATTTGGACTAGTATGGTTCCTAGTATTAGCAGTAGATGAGAACGATGTTATGGTATGT TAAGCCGAAGCCTCTCTCTATATAAATATATCTGGATAATGTATGCTGGACACCCGTCTA TTGTAAAGTTTACTGTTACTG