Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035752_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:45356441:45358855:1 gene:Zm00001d035752 gene_biotype:protein_coding transcript_biotype:protein_coding description:STIP1 and U box-containing protein 1%3B STIP1 homology and U box-containing protein 1

Sequence

ATGGCGACATCCCCAGCGCTCCTCTTCCCTTCTCCCTCCTCGGCATCCTCTGCGCCTTCG
TCGGCGCGGGTGGAGGCAGTGGTGCTTTTCAACGTCTGCGACAGCTACGTGCGGCGCCCG
GACCAGGCGGACCGCGTCATCGGCACCCTCCTCGGTTCCCTCCTCTCCGACGGCACCGTC
CACGTCCGCAACTCCTATGTCGTCCCCCACAGCGAGTCAGCCGACCAGGTCGCCATCGAC
ATCGACTACCACCATAACATGTACGCCTCGCACCAGAAGGTGAACCCCAAGGAGGTCATC
GTCGGATGGTTCTCGACTGGATTTGGTGTTTCTGGGGGGAGTACGCTCATCCACGAGTTC
TATTCAAGGGAAGTACAAAACCCCATCCATCTTACAGTCGACACTGGCTTCACTAGGGGG
GAGGCTTCCATCAAAGCCTACATCTCATCCAATCTGTCCCTCAGAGATAGTCAACTCGCT
GCACAATTTCAGGAAATCCCTCTGGATCTGAAGATGATTGAGGCGGAAAAGGCTGGATGT
ATGTTACCGAACATTTTGAAGCTTCCATCACTCTTACTACCTTCTGTTACAGTTGAGATC
CTGAAATCTACTATGGTAGAGAAGCTCCCCAATGATCTGGAAGGAATGGAGTCATCGATG
GGGAAGCTTTACATTCTTATCGATGAGATCTACAAATACGTCGATGATGTTGTGGAAGGA
CGCGTGGCACCCGACAACAGAATTGGAAGGTTCATCTCTGATTCTTTTGCTTCGGTGCCG
AAATTGTCCCCGGCTGCTTTCGATAAGCTTTTCAATGACAAGATTCAGGATAACCTTGCG
CTGGTATACCTGTCAAGCATCACAAGGACACAAATCAGCATCGCCGAGAAGTTGAACACT
GCTGCTCAAGTGCTGTAG

Peptide Sequence

PEP ID

Zm00001d035752_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:45356441:45358855:1 gene:Zm00001d035752 transcript:Zm00001d035752_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:STIP1 and U box-containing protein 1%3B STIP1 homology and U box-containing protein 1

Sequence

MATSPALLFPSPSSASSAPSSARVEAVVLFNVCDSYVRRPDQADRVIGTLLGSLLSDGTV
HVRNSYVVPHSESADQVAIDIDYHHNMYASHQKVNPKEVIVGWFSTGFGVSGGSTLIHEF
YSREVQNPIHLTVDTGFTRGEASIKAYISSNLSLRDSQLAAQFQEIPLDLKMIEAEKAGC
MLPNILKLPSLLLPSVTVEILKSTMVEKLPNDLEGMESSMGKLYILIDEIYKYVDDVVEG
RVAPDNRIGRFISDSFASVPKLSPAAFDKLFNDKIQDNLALVYLSSITRTQISIAEKLNT
AAQVL

Transcript Sequence

Transcript ID

Zm00001d035752_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:45356441:45358855:1 gene:Zm00001d035752 gene_biotype:protein_coding transcript_biotype:protein_coding description:STIP1 and U box-containing protein 1%3B STIP1 homology and U box-containing protein 1

Sequence

CTAGCCCGCTACCCCTGCCCCTTCTCTCTTCGTCGCGCCTCCGCCTCCGCCGTCGTAGCA
TCCTCCTCCGCCACCTCGGCCATGGCGACATCCCCAGCGCTCCTCTTCCCTTCTCCCTCC
TCGGCATCCTCTGCGCCTTCGTCGGCGCGGGTGGAGGCAGTGGTGCTTTTCAACGTCTGC
GACAGCTACGTGCGGCGCCCGGACCAGGCGGACCGCGTCATCGGCACCCTCCTCGGTTCC
CTCCTCTCCGACGGCACCGTCCACGTCCGCAACTCCTATGTCGTCCCCCACAGCGAGTCA
GCCGACCAGGTCGCCATCGACATCGACTACCACCATAACATGTACGCCTCGCACCAGAAG
GTGAACCCCAAGGAGGTCATCGTCGGATGGTTCTCGACTGGATTTGGTGTTTCTGGGGGG
AGTACGCTCATCCACGAGTTCTATTCAAGGGAAGTACAAAACCCCATCCATCTTACAGTC
GACACTGGCTTCACTAGGGGGGAGGCTTCCATCAAAGCCTACATCTCATCCAATCTGTCC
CTCAGAGATAGTCAACTCGCTGCACAATTTCAGGAAATCCCTCTGGATCTGAAGATGATT
GAGGCGGAAAAGGCTGGATGTATGTTACCGAACATTTTGAAGCTTCCATCACTCTTACTA
CCTTCTGTTACAGTTGAGATCCTGAAATCTACTATGGTAGAGAAGCTCCCCAATGATCTG
GAAGGAATGGAGTCATCGATGGGGAAGCTTTACATTCTTATCGATGAGATCTACAAATAC
GTCGATGATGTTGTGGAAGGACGCGTGGCACCCGACAACAGAATTGGAAGGTTCATCTCT
GATTCTTTTGCTTCGGTGCCGAAATTGTCCCCGGCTGCTTTCGATAAGCTTTTCAATGAC
AAGATTCAGGATAACCTTGCGCTGGTATACCTGTCAAGCATCACAAGGACACAAATCAGC
ATCGCCGAGAAGTTGAACACTGCTGCTCAAGTGCTGTAGGTTTGGCGGTGTGGCATCTGG
TTTGGACGTGGATGGCTTGATGCTATCTGTGATGCTTGGCGTAAGTGTGATTGGTGACAG
AAATGCATTTTTGTACTCATTATTATTATTGCTAAATGAGAGACCTGATGGAAAGGGTTA
GCCAACGATGAGATCCCATAATGTTGCCAGAATGCCAGTAGAGTGGTGGATGGCGAGATG
TTTCTGTTTGGATAGTATTCTGTGCTCCAGGTTGAATATTTGTAATGCTCGTTGGTTTTG
TGTAGCGACACATCGGCAATGTGGAGCAATGAAGAGATTTGCTCCACATTTTACGTCGTC
ATTTAGAGGTGTGGTGGCATGCAATGTGATGCTGTTGTTGCAGGAAAATCGGTTTTGCTG
TCCTGTTATAGCAAGCTTTCCTCCTGCGGCCCTGCTTTTCATTT