Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035731_T019
CDS Infomation

cds chromosome:B73_RefGen_v4:6:43841752:43846203:1 gene:Zm00001d035731 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGCCCATGCTAACTTTTATGAGCTCAGAAAATTTATCTTTCTTAAAAAACCAGATC
AACCTTGTTGAAGAGCTTGAAGTGAGCATGTCCTGCATGTCTGACGGTGAACATGATATT
ATAGCATCAGTTGGTCACAGAAGAATGTCAAAGATGGAGGAGCATTCATCTCAGGGACTG
GTTCCATCTAATTTTTCTCCCTCATCTCAGCAAAGTAAAACTAATGGAGTCGGAGAAAAA
GGATTAGTCGGCTGTTTCTCTCATGGTGACGAAAGTCGTACTGGACCACAAAAGCTGGAA
GCTGATAAATGGTTTAATGAAATGGCTCCAATGACACACAGACTCCTTTCGGCTTTAATT
ATGGAAGATGACCTACCTGATTCCAATGGGGTGCAAAGAGATATACTTGTTGAATTTCCA
AATAGCCACAATCCTTACACTGTCAACAGATACTTAGAAAATGAACTTCAAGCTAGTGCC
ATAACATCTAATTTTGGGCTGAGCGTGGATTTCGTGCACTCAAACAGTACTTCTGTGGTA
CATCAGAGCATGTGCAATGGTTTTACAGCTTCAAGCAATTTCATTAATTCAAACAGTGAA
AATTCAGTTCATAGTGAGAATTTATCAGACGGACTAAATTTTACAGTATACCCAGAAAGT
GGCCCTTTGCATGACTTGATACCACTGACTCCACGGCAATGTCAAAATCCAGGGAAAGAT
TTCCCTTTGTCTCCATATGAGTATCAATATGGGCAGATGTCTATGGAAGATAAGATTTTA
ATTGAGCTGCAAAGTATTGGCATTTGTCCAGAGACAGTGCCAAAGCTAGATGACGGAGAA
GATGAGGACATTAATAAAATGATTTCAGAGCTGAGGAAAAGGCTGCATGATCAGGTGAAC
CAGAAGAAATGCAGATTACATAAGCTAGATAAATCAATTCAAGATACAAAGAATATTGAG
GAGAGGAGCTTGGAGCAACATGCTATGAACAAATTGGTTGAAAGAGCATACAGAAAACTC
AAGGGTGGGCGGATTGGCTCTAGTCACAAGGCTGGTGTCAGTAAATCTGCCAACAAAGCT
GCAAAACAGCTAGCCTTGGCTTTTGCCAAACGCACTCTTGTTCGATGCCACAAATTTGAT
GAAACAGGGAAAAGCTGCTTCAGCGAGCCTTCTCTTTGGAGTATCCTGTCTGCACCCTTG
CCAAGCAGTGATTCAAAATGCACAGAGGGTGTAGAGAGGCTGAAGCATCAAAAGCTTGAC
AGAACTCCATTCGACCAAGGTGGTGCAAAATGGAAAAAGGTCGACAGGGAACGGGACCAC
AACAGGGATGCATCCGCGAAGGGCTCCGGATTGAAATCGGGACGTCATTCATCAGGTGGT
AGCGGCAGGAGCGGCGAGCGCAAAAACAAGACAAAGCCAAAGCAAAAGCTTGCACAGCTA
TCAACCTCGGGGAACGTGCTGGGTAGAGTCGTTGAGCCATTTTCGTCTCCAACAGTGCAG
GAGCCCCCTGAACCTGCAAGCGAGAAAAAGACCCAGCATCCAACTAGGGGTGCTTCCAGC
AGCGCTGCCCAGCGGCTTACCGTGGACGCTGGACTGCCAGTGTTGCCTGGGTTAGATGAC
ATATTGGACGTCCCGGAAGGGCTTGACGGGCAGGGCAACGATATCAGCTCGTGGTTTACG
GATGGCCTTGACGACTCGTTGCAAGACATTGATCTTTCTGGCGCCCTGGAAATCCCAGAC
GATGACCTCACCCAGCTGGGATTTATGTAA

Peptide Sequence

PEP ID

Zm00001d035731_P019
PEP Infomation

pep chromosome:B73_RefGen_v4:6:43841752:43846203:1 gene:Zm00001d035731 transcript:Zm00001d035731_T019 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEPMLTFMSSENLSFLKNQINLVEELEVSMSCMSDGEHDIIASVGHRRMSKMEEHSSQGL
VPSNFSPSSQQSKTNGVGEKGLVGCFSHGDESRTGPQKLEADKWFNEMAPMTHRLLSALI
MEDDLPDSNGVQRDILVEFPNSHNPYTVNRYLENELQASAITSNFGLSVDFVHSNSTSVV
HQSMCNGFTASSNFINSNSENSVHSENLSDGLNFTVYPESGPLHDLIPLTPRQCQNPGKD
FPLSPYEYQYGQMSMEDKILIELQSIGICPETVPKLDDGEDEDINKMISELRKRLHDQVN
QKKCRLHKLDKSIQDTKNIEERSLEQHAMNKLVERAYRKLKGGRIGSSHKAGVSKSANKA
AKQLALAFAKRTLVRCHKFDETGKSCFSEPSLWSILSAPLPSSDSKCTEGVERLKHQKLD
RTPFDQGGAKWKKVDRERDHNRDASAKGSGLKSGRHSSGGSGRSGERKNKTKPKQKLAQL
STSGNVLGRVVEPFSSPTVQEPPEPASEKKTQHPTRGASSSAAQRLTVDAGLPVLPGLDD
ILDVPEGLDGQGNDISSWFTDGLDDSLQDIDLSGALEIPDDDLTQLGFM

Transcript Sequence

Transcript ID

Zm00001d035731_T019
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:43841752:43846203:1 gene:Zm00001d035731 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGATATTACAGACATAACAGGTGAACCAGAAGATGACCAAGAGGAGCTTTTAGCTGCTG
TTAATGCTGCTCGCAGCGCTATTGTTAGTGCCTATTCTGGTCCTTTTTGGAAGAAAATGG
AGCCCATGCTAACTTTTATGAGCTCAGAAAATTTATCTTTCTTAAAAAACCAGATCAACC
TTGTTGAAGAGCTTGAAGTGAGCATGTCCTGCATGTCTGACGGTGAACATGATATTATAG
CATCAGTTGGTCACAGAAGAATGTCAAAGATGGAGGAGCATTCATCTCAGGGACTGGTTC
CATCTAATTTTTCTCCCTCATCTCAGCAAAGTAAAACTAATGGAGTCGGAGAAAAAGGAT
TAGTCGGCTGTTTCTCTCATGGTGACGAAAGTCGTACTGGACCACAAAAGCTGGAAGCTG
ATAAATGGTTTAATGAAATGGCTCCAATGACACACAGACTCCTTTCGGCTTTAATTATGG
AAGATGACCTACCTGATTCCAATGGGGTGCAAAGAGATATACTTGTTGAATTTCCAAATA
GCCACAATCCTTACACTGTCAACAGATACTTAGAAAATGAACTTCAAGCTAGTGCCATAA
CATCTAATTTTGGGCTGAGCGTGGATTTCGTGCACTCAAACAGTACTTCTGTGGTACATC
AGAGCATGTGCAATGGTTTTACAGCTTCAAGCAATTTCATTAATTCAAACAGTGAAAATT
CAGTTCATAGTGAGAATTTATCAGACGGACTAAATTTTACAGTATACCCAGAAAGTGGCC
CTTTGCATGACTTGATACCACTGACTCCACGGCAATGTCAAAATCCAGGGAAAGATTTCC
CTTTGTCTCCATATGAGTATCAATATGGGCAGATGTCTATGGAAGATAAGATTTTAATTG
AGCTGCAAAGTATTGGCATTTGTCCAGAGACAGTGCCAAAGCTAGATGACGGAGAAGATG
AGGACATTAATAAAATGATTTCAGAGCTGAGGAAAAGGCTGCATGATCAGGTGAACCAGA
AGAAATGCAGATTACATAAGCTAGATAAATCAATTCAAGATACAAAGAATATTGAGGAGA
GGAGCTTGGAGCAACATGCTATGAACAAATTGGTTGAAAGAGCATACAGAAAACTCAAGG
GTGGGCGGATTGGCTCTAGTCACAAGGCTGGTGTCAGTAAATCTGCCAACAAAGCTGCAA
AACAGCTAGCCTTGGCTTTTGCCAAACGCACTCTTGTTCGATGCCACAAATTTGATGAAA
CAGGGAAAAGCTGCTTCAGCGAGCCTTCTCTTTGGAGTATCCTGTCTGCACCCTTGCCAA
GCAGTGATTCAAAATGCACAGAGGGTGTAGAGAGGCTGAAGCATCAAAAGCTTGACAGAA
CTCCATTCGACCAAGGTGGTGCAAAATGGAAAAAGGTCGACAGGGAACGGGACCACAACA
GGGATGCATCCGCGAAGGGCTCCGGATTGAAATCGGGACGTCATTCATCAGGTGGTAGCG
GCAGGAGCGGCGAGCGCAAAAACAAGACAAAGCCAAAGCAAAAGCTTGCACAGCTATCAA
CCTCGGGGAACGTGCTGGGTAGAGTCGTTGAGCCATTTTCGTCTCCAACAGTGCAGGAGC
CCCCTGAACCTGCAAGCGAGAAAAAGACCCAGCATCCAACTAGGGGTGCTTCCAGCAGCG
CTGCCCAGCGGCTTACCGTGGACGCTGGACTGCCAGTGTTGCCTGGGTTAGATGACATAT
TGGACGTCCCGGAAGGGCTTGACGGGCAGGGCAACGATATCAGCTCGTGGTTTACGGATG
GCCTTGACGACTCGTTGCAAGACATTGATCTTTCTGGCGCCCTGGAAATCCCAGACGATG
ACCTCACCCAGCTGGGATTTATGTAAGGAGAAGGAAGCAATCGTTGTTTGTCCTGTGCAT
ATACATGTCTTTCCTTCACCTAATGTATGGTAGCGCTGATCCATTGATCTCCCTGCCACA
ACCTGGTAGTCAGTGTCTGCTGGCATGGACTGGATAGTTGCAGATGAGGCGAGGTAGCAG
CAACAAGAACATGCTGAGATTTGTTAATGTTATCCTGTAGTT