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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035723_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:43293215:43297233:1 gene:Zm00001d035723 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Sequence

ATGCTCATGAAGGGGCCATCTTCAGATGTTCTCAGAGCAAGCATTTCTAGCGCCCCAAGT
ACATCTAGCCATGGTTCTGCACAAGATGAATGTGATTCATTAGGGGATGTGTATGTATGG
GGTGAGGTTGTCTGCGATACTTCAGTACGAACTGGTTCTGATACTGTTATTAGTTCAACT
GGCAGGATTGACATTCTCCTCCCGAAGCCATTGGAGTCCAATTTAGTTCTTGATGTGTAT
CATGTAGATTGTGGGGTTAAGCATGCTGCATTGGTCATGAAAAATGGTGAGGTTTTTACA
TGGGGTGAAGATTCTGGAGGCCGCCTTGGCCATGGAACACGAGAAGATTGTGTTCGTCCA
CGTCTGGTTGAGTCTTTGACAGTTTCCAATGTAGATTTTGTTGCCTGTGGTGAATTTCAT
ACATGTGCTGTTACAACAACGGGTGAGCTTTATACATGGGGAGATGGAACTTACAATGTT
GGCCTTCTCGGACATGGCAATGATGTAGGACACTGGATACCTAAGAGGATTTCTGGAGCA
CTGGAAGGTCTTCAAGTTGCTTATGTTTCATGTGGGACCTGGCATACAGCCTTGATAACA
TCCATGGGCCAGTTATTTACCTTTGGGGACGGTTCATTTGGTGTATTAGGTCACGGAGAT
CTGAAAAGTGTTTCTTACCCAAGGGAGGTAGAGTCACTATCAGGGTTGAAAACAATTGCT
GTGGCATGTGGTGTGTGGCACACTGCAGCTATAGTGGAGGTTATTGTCACTCGGTCCAGT
TCAAGTGTAAAGCTATCTGCTGGAAAGCTGTTCACATGGGGAGATGGTGACAAGCATCGA
CTTGGTCATGGTGACAAAGAAACTCGACTTAAGCCGACTTGCGTGGCTACACTTATTGAT
CATGATTTTTATAGGGTGGCATGTGGGCACAGCCTTACTGTAGCCTTGACAACTTCTGGA
CAAGTATTGAGCATGGGTAATGCTGTTTATGGTCAGCTTGGAAATCCTCATTCAGATGGA
AGGATACCATGTTTAGTTGAAGACAAGATTGTGGGTGAACAAGTTCTCCAAATTGCCTGT
GGATCCTACCACGTCGCAGTTTTGACAAATAGGAGTGAAGTTTTTACATGGGGGAAGGGA
GCTAATGGAAGATTGGGCCATGGAGATACAGAGGATCGGAAGGTGCCTACACTGGTTGAA
GCCTTGAAAGATAGAGCTGTTAGGTACATAGCCTGTGGTGCAAACTTCACTGCTGCTATT
TGTCAATATAAATGGGTTTCTGGAGCTGACCAATCACAGTGCTCCTCATGTCGACAACCA
TTTGGGTTTACACGAAAGAGGCGCAACTGCTATAATTGTGGACTTGTCCATTGTAATTCC
TGCACCTCGCGGAAGGCTTTGAGAGCATCACTGGCTCCTAGTCCTGGGAAACCCTACCGT
GTTTGTGATTCATGTTTCTTGAAGTTGAATAATGCCTCAGATCCTAATGCAGCTAACCGG
AGGAAAGATCCTGTTCCCTATCAACCTGTTGAAAGCAATGGCGATGCTAAAGTAGGAAAG
GCTAGTTTGCCTAGCAATATGGAAATGATTCGAAATTTGGATATCAAAGCAGCATGGCAA
GGGAAGAAAACTGATGGGCTATCGTTTCTCCGGAATCCTCAAGTTAGTTCGCTCCTGCAG
CTGAGTGATATTGCTTTATCTGGTGGCTTGGGCATGAACAGATCAGCTCCGAGAGCGGTA
CACATATCTGCAGCTCGCTCGGTTACTACTTCAAGAGCTGTTTCCCCTTTCTCTCGCAAG
CCCAGTCCACCGCGTTCTACTACACCAGTTCCAACAGCCCATGGTCTTTCTTTCTCAAAA
AGTGCTACTGATAATATTGTGAAAGCAAATGAGCTCTTAAATCAGGAAGTTGAAAGACTG
CGTGCACAGGTTGATAACCTGAGAAATCGCTGTGAGCTTCAAGAACTTGAGCTTCAAAAA
TCAGCAAAAAAAGTACTAGAGGCCATGACACTGGTTGCCGAAGAATCTGCAAAATCCAAA
GCTGCAAAAGAAGTTATAAAATCTTTAACCGCTCAGCTCAAGGATATGGCTGAGAGATTA
CCACCAGACCACGGGGCCTATAATGTCAATGAGACAAAGCAATCACATAATCCGAATGGC
ATTGACTCACATGCTGCTAGCTACTCTAGCATGAATGGAATTCACCAGACACGGAATGAG
TTGCTCAATGCTTCAATTGCACATAGTCTGAACTCTGGACGACCATCGTCGCATTGCAAT
GGAATCTCAGGACAACATAAATTACTGGGCAATGTGAGTGAACACAGTGACTGCAGCACT
CACAGCCTAAGAATTACCGCTCCTCACGATTCAGAGCTTCCTAGTCGAAGAGCACGCAGC
AGCAGTGATGAGATGCTGACAGCAGGCAGTAGAGTGGATGACAATCTGAACGTTGATGCT
GTGTCCCTTCAAAGCGGCGAGGATGGCTACAAGCCTCGAGGCACAATACCATTGCCAAGC
AACCAAGTTCAGGCTGAATGGATCGAACAATACGAACCTGGCGTATACATAACACTCACA
ACCCTTCGTGATGGGACCCGGGATCTGAAGAGGGTTCGCTTCAGCCGAAGACGTTTTGGC
GAACATCAGGCGGAAAATTGGTGGAATGAGAACCGGGAAAAAGTGTATGAGCGATACAAC
GTGAAGAGCTCTGAGCGTGTGTCGTCGGCAGCCTCAACCCGGTCTGCGTATTAA

Peptide Sequence

PEP ID

Zm00001d035723_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:43293215:43297233:1 gene:Zm00001d035723 transcript:Zm00001d035723_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Sequence

MLMKGPSSDVLRASISSAPSTSSHGSAQDECDSLGDVYVWGEVVCDTSVRTGSDTVISST
GRIDILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRP
RLVESLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGA
LEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIA
VACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID
HDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIAC
GSYHVAVLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGANFTAAI
CQYKWVSGADQSQCSSCRQPFGFTRKRRNCYNCGLVHCNSCTSRKALRASLAPSPGKPYR
VCDSCFLKLNNASDPNAANRRKDPVPYQPVESNGDAKVGKASLPSNMEMIRNLDIKAAWQ
GKKTDGLSFLRNPQVSSLLQLSDIALSGGLGMNRSAPRAVHISAARSVTTSRAVSPFSRK
PSPPRSTTPVPTAHGLSFSKSATDNIVKANELLNQEVERLRAQVDNLRNRCELQELELQK
SAKKVLEAMTLVAEESAKSKAAKEVIKSLTAQLKDMAERLPPDHGAYNVNETKQSHNPNG
IDSHAASYSSMNGIHQTRNELLNASIAHSLNSGRPSSHCNGISGQHKLLGNVSEHSDCST
HSLRITAPHDSELPSRRARSSSDEMLTAGSRVDDNLNVDAVSLQSGEDGYKPRGTIPLPS
NQVQAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAENWWNENREKVYERYN
VKSSERVSSAASTRSAY

Transcript Sequence

Transcript ID

Zm00001d035723_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:43293215:43297233:1 gene:Zm00001d035723 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Sequence

TGCAACAATATGCTCATGAAGGGGCCATCTTCAGATGTTCTCAGAGCAAGCATTTCTAGC
GCCCCAAGTACATCTAGCCATGGTTCTGCACAAGATGAATGTGATTCATTAGGGGATGTG
TATGTATGGGGTGAGGTTGTCTGCGATACTTCAGTACGAACTGGTTCTGATACTGTTATT
AGTTCAACTGGCAGGATTGACATTCTCCTCCCGAAGCCATTGGAGTCCAATTTAGTTCTT
GATGTGTATCATGTAGATTGTGGGGTTAAGCATGCTGCATTGGTCATGAAAAATGGTGAG
GTTTTTACATGGGGTGAAGATTCTGGAGGCCGCCTTGGCCATGGAACACGAGAAGATTGT
GTTCGTCCACGTCTGGTTGAGTCTTTGACAGTTTCCAATGTAGATTTTGTTGCCTGTGGT
GAATTTCATACATGTGCTGTTACAACAACGGGTGAGCTTTATACATGGGGAGATGGAACT
TACAATGTTGGCCTTCTCGGACATGGCAATGATGTAGGACACTGGATACCTAAGAGGATT
TCTGGAGCACTGGAAGGTCTTCAAGTTGCTTATGTTTCATGTGGGACCTGGCATACAGCC
TTGATAACATCCATGGGCCAGTTATTTACCTTTGGGGACGGTTCATTTGGTGTATTAGGT
CACGGAGATCTGAAAAGTGTTTCTTACCCAAGGGAGGTAGAGTCACTATCAGGGTTGAAA
ACAATTGCTGTGGCATGTGGTGTGTGGCACACTGCAGCTATAGTGGAGGTTATTGTCACT
CGGTCCAGTTCAAGTGTAAAGCTATCTGCTGGAAAGCTGTTCACATGGGGAGATGGTGAC
AAGCATCGACTTGGTCATGGTGACAAAGAAACTCGACTTAAGCCGACTTGCGTGGCTACA
CTTATTGATCATGATTTTTATAGGGTGGCATGTGGGCACAGCCTTACTGTAGCCTTGACA
ACTTCTGGACAAGTATTGAGCATGGGTAATGCTGTTTATGGTCAGCTTGGAAATCCTCAT
TCAGATGGAAGGATACCATGTTTAGTTGAAGACAAGATTGTGGGTGAACAAGTTCTCCAA
ATTGCCTGTGGATCCTACCACGTCGCAGTTTTGACAAATAGGAGTGAAGTTTTTACATGG
GGGAAGGGAGCTAATGGAAGATTGGGCCATGGAGATACAGAGGATCGGAAGGTGCCTACA
CTGGTTGAAGCCTTGAAAGATAGAGCTGTTAGGTACATAGCCTGTGGTGCAAACTTCACT
GCTGCTATTTGTCAATATAAATGGGTTTCTGGAGCTGACCAATCACAGTGCTCCTCATGT
CGACAACCATTTGGGTTTACACGAAAGAGGCGCAACTGCTATAATTGTGGACTTGTCCAT
TGTAATTCCTGCACCTCGCGGAAGGCTTTGAGAGCATCACTGGCTCCTAGTCCTGGGAAA
CCCTACCGTGTTTGTGATTCATGTTTCTTGAAGTTGAATAATGCCTCAGATCCTAATGCA
GCTAACCGGAGGAAAGATCCTGTTCCCTATCAACCTGTTGAAAGCAATGGCGATGCTAAA
GTAGGAAAGGCTAGTTTGCCTAGCAATATGGAAATGATTCGAAATTTGGATATCAAAGCA
GCATGGCAAGGGAAGAAAACTGATGGGCTATCGTTTCTCCGGAATCCTCAAGTTAGTTCG
CTCCTGCAGCTGAGTGATATTGCTTTATCTGGTGGCTTGGGCATGAACAGATCAGCTCCG
AGAGCGGTACACATATCTGCAGCTCGCTCGGTTACTACTTCAAGAGCTGTTTCCCCTTTC
TCTCGCAAGCCCAGTCCACCGCGTTCTACTACACCAGTTCCAACAGCCCATGGTCTTTCT
TTCTCAAAAAGTGCTACTGATAATATTGTGAAAGCAAATGAGCTCTTAAATCAGGAAGTT
GAAAGACTGCGTGCACAGGTTGATAACCTGAGAAATCGCTGTGAGCTTCAAGAACTTGAG
CTTCAAAAATCAGCAAAAAAAGTACTAGAGGCCATGACACTGGTTGCCGAAGAATCTGCA
AAATCCAAAGCTGCAAAAGAAGTTATAAAATCTTTAACCGCTCAGCTCAAGGATATGGCT
GAGAGATTACCACCAGACCACGGGGCCTATAATGTCAATGAGACAAAGCAATCACATAAT
CCGAATGGCATTGACTCACATGCTGCTAGCTACTCTAGCATGAATGGAATTCACCAGACA
CGGAATGAGTTGCTCAATGCTTCAATTGCACATAGTCTGAACTCTGGACGACCATCGTCG
CATTGCAATGGAATCTCAGGACAACATAAATTACTGGGCAATGTGAGTGAACACAGTGAC
TGCAGCACTCACAGCCTAAGAATTACCGCTCCTCACGATTCAGAGCTTCCTAGTCGAAGA
GCACGCAGCAGCAGTGATGAGATGCTGACAGCAGGCAGTAGAGTGGATGACAATCTGAAC
GTTGATGCTGTGTCCCTTCAAAGCGGCGAGGATGGCTACAAGCCTCGAGGCACAATACCA
TTGCCAAGCAACCAAGTTCAGGCTGAATGGATCGAACAATACGAACCTGGCGTATACATA
ACACTCACAACCCTTCGTGATGGGACCCGGGATCTGAAGAGGGTTCGCTTCAGCCGAAGA
CGTTTTGGCGAACATCAGGCGGAAAATTGGTGGAATGAGAACCGGGAAAAAGTGTATGAG
CGATACAACGTGAAGAGCTCTGAGCGTGTGTCGTCGGCAGCCTCAACCCGGTCTGCGTAT
TAACTTGAGGAGACCTGTGTCATCTTGGAACTTGTAGAAAAACTGCAAAGGCTGCAGCAT
CACTACTCAACAGCAGCAAACTATTCAGGTCATACATACTGGGAGATGACAAAAGGCCAG
CGGCCATTATTATTTTGTTGGCACTACACAATGCTGGATACAATGCTAGGCTATGTATGT
TATCGGTCTGTTTTGGTGTAATGCACATAGTCACATAGACGATGATACACGAGAAGTGAA
ACCATGTTTTAGGTCAGCAAACATCACTAGGCAAGGTAGGTTAGGTTCTTTGACTGCCTA
TTTTTCCTCTTTCCTTTCCACGGATATGCTTACTTATGTATGTTGACATTTATATATGGT
AAAAGTTATCATGCAGCAATGTAATTGTTATGCTTTTGTGGTTTGTGCT