Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d035682_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:40985292:40989041:1 gene:Zm00001d035682 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-humulene/(-)-(E)-beta-caryophyllene synthase
Sequence	ATGGCCAGCTTCTCCTTGAAACCACAGCACAATGGCAGCAGCAGCAGGATCTACCATACT ATCTGTAGTGCTACTGCCTCCGAATGGAGGTCGCTCCTGCGGTCCCGAAGCAGTGTTTCA TGGAGCTGGAAGAAGCACACAAGGTTGCGATTGCGATGCTGTCAGGGTTCCAATGGGGGT GATGACAGCCGTCTGAGCCAAAACACCGGCATTTTCCACCCATCGATATGGGGGGATTTC TTCCTTGGTTGCTCTAGCAGCCCTGAAGAAGCTGCTGCTTCGTCCCAACAAAAGGCTTGG ATGGAACGATGCGATGAACTGAAGGAAGAAGTGGGTCGTCTGATGGTAGTAGAAGCAAAC TCACCATTGCATGAGAGGCTGCATTTCATAGACGCGCTGGAGAGCCTGTGCTTGGACCAC CTGCTGAAAGAAGAGATCGGTGCTGCGCTGACGCAGATCGAGACCGCCGGTGTCAGTGAC GACTGCGACATTGGGACCGTCTCTCTCTGGTTTTACTTGCTCCGGAAACACCGCCGCAGG GCGTCGCCAGATGTGTTCGTGAGGTTCAGAGACGCGGAGGGAGGTTTCCAGGCGAACGAT CCTGGGGACCTACTGAGGCTCTACAACGCTGCGCATTTCAGGACCCATGGGGAGACAATA CTCGATGAAGCCATCGCGTTCGCGAGAAGCCGTCTGGAGATGATGCTGCCCTACGTGAAA GGGCCATTGTTGGCGCATGAAGTCAGATCCTCGCTGGAGATCCCGCTGCCTAGAAGGGTC AGGATCTACGAGTCAAAGTATTACATCCATGCGTATGAGACAAGTGGAACGCTGCATGAG AAGGTACTGCAACTTGCCAAGCTGAACTCCAACGTTCTGCAGCTCCATCATCAGCAAGAG CTGAAGATCCTTACAAGATGGTGGGAGGATATGCAGATCGGATCAAAACTTCCTTTCGCA CGAGATAGAATCGTGGAGTGTTTTCTATGGATCTTAGGAGTATACTATGAACCGTGTCAT TCAAGAGCCCGGATAATATTGACAATGGTTATCGCCATCGTGACACTCTTGGACGATATT TTCGATTCTTTCGCGACCCCACAAGAATGTGAAATACTCACTAATTGCATCGAAAGCTGG GATCCCAAAGGGGCTCAAGACCTCCCAGGTTGCATGAAATTTGCTCTAGAGAAGATATTG GATAGCTACCAGACCATTACAAATATGCTCCACCGAGAGGACAAGTATCGAATGACGTAT CTAAGACACTTTACAGAAGATCTAGTGAGAAGCTTCAACATGGAGGTAAAAATGCTTCAA AAAGGTTACATCCCAGATTCTGTTGAAGAGCATCTTAAGGTTTCACTCAGAACTGGTGGG TGTCCCATCTTATCATGTGCTTGCTTTGTCGGGATGGATGATATAGCAACAAAGGATTTC TTTGATTGGATTTCTAGCGTACCCAAAATGGTGCGCGCACTTTCTATAATTCTGAGACTA GCAGACGATCTCCACTCGTATGAGCGGGAGCAGCTAATCCCTCATGTAGCTTCCACAATC GACACCTACATGAAAAAGCACAATGTCTCAATTGAAGTGGCGCAGGAAAACATACACAAA CTAAAAGAAGAGTCATGGAAAGATTTAAATAGCGAGTGGCTAAATCCATGCAATGATGTG TATCCAAAGCAACTATTGGAGAGGATATTCAACTTGGCAAGGACGATGGAGTTCATGTAC AACCAAGAGGACAATTTCACCAACTGCCACAACCTTAAGGATACCATTCGCTGCTTGTTG GTAGAGCCATATAGGATCCACATTTAG

Peptide Sequence

PEP ID	Zm00001d035682_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:40985292:40989041:1 gene:Zm00001d035682 transcript:Zm00001d035682_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-humulene/(-)-(E)-beta-caryophyllene synthase
Sequence	MASFSLKPQHNGSSSRIYHTICSATASEWRSLLRSRSSVSWSWKKHTRLRLRCCQGSNGG DDSRLSQNTGIFHPSIWGDFFLGCSSSPEEAAASSQQKAWMERCDELKEEVGRLMVVEAN SPLHERLHFIDALESLCLDHLLKEEIGAALTQIETAGVSDDCDIGTVSLWFYLLRKHRRR ASPDVFVRFRDAEGGFQANDPGDLLRLYNAAHFRTHGETILDEAIAFARSRLEMMLPYVK GPLLAHEVRSSLEIPLPRRVRIYESKYYIHAYETSGTLHEKVLQLAKLNSNVLQLHHQQE LKILTRWWEDMQIGSKLPFARDRIVECFLWILGVYYEPCHSRARIILTMVIAIVTLLDDI FDSFATPQECEILTNCIESWDPKGAQDLPGCMKFALEKILDSYQTITNMLHREDKYRMTY LRHFTEDLVRSFNMEVKMLQKGYIPDSVEEHLKVSLRTGGCPILSCACFVGMDDIATKDF FDWISSVPKMVRALSIILRLADDLHSYEREQLIPHVASTIDTYMKKHNVSIEVAQENIHK LKEESWKDLNSEWLNPCNDVYPKQLLERIFNLARTMEFMYNQEDNFTNCHNLKDTIRCLL VEPYRIHI

Transcript Sequence

Transcript ID	Zm00001d035682_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:40985292:40989041:1 gene:Zm00001d035682 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-humulene/(-)-(E)-beta-caryophyllene synthase
Sequence	GTCTTAGCTAATTTTAGCAGCTAACTATCAGTTTTAGTGCATTCAAACACTTTCTAGCTA CAACTATCATATACATGCATGTCACCTAAAAGGCTAAAACAAGTAATAAGGCTAGAGCTG CAGGTAGGTTTCCTCTTTTGCACAAGATATCTCGAGCTAGATTACACAAACTTTAAACTA CTCCTATCTTATTAGAAACCAAACTTTTCTTTTTTATAAACTACTCGTATATAAAAGTAG AGTGCAGGTCATCAGTTTGGAGACGCAGAGCTGCATTATGGCCAGCTTCTCCTTGAAACC ACAGCACAATGGCAGCAGCAGCAGGATCTACCATACTATCTGTAGTGCTACTGCCTCCGA ATGGAGGTCGCTCCTGCGGTCCCGAAGCAGTGTTTCATGGAGCTGGAAGAAGCACACAAG GTTGCGATTGCGATGCTGTCAGGGTTCCAATGGGGGTGATGACAGCCGTCTGAGCCAAAA CACCGGCATTTTCCACCCATCGATATGGGGGGATTTCTTCCTTGGTTGCTCTAGCAGCCC TGAAGAAGCTGCTGCTTCGTCCCAACAAAAGGCTTGGATGGAACGATGCGATGAACTGAA GGAAGAAGTGGGTCGTCTGATGGTAGTAGAAGCAAACTCACCATTGCATGAGAGGCTGCA TTTCATAGACGCGCTGGAGAGCCTGTGCTTGGACCACCTGCTGAAAGAAGAGATCGGTGC TGCGCTGACGCAGATCGAGACCGCCGGTGTCAGTGACGACTGCGACATTGGGACCGTCTC TCTCTGGTTTTACTTGCTCCGGAAACACCGCCGCAGGGCGTCGCCAGATGTGTTCGTGAG GTTCAGAGACGCGGAGGGAGGTTTCCAGGCGAACGATCCTGGGGACCTACTGAGGCTCTA CAACGCTGCGCATTTCAGGACCCATGGGGAGACAATACTCGATGAAGCCATCGCGTTCGC GAGAAGCCGTCTGGAGATGATGCTGCCCTACGTGAAAGGGCCATTGTTGGCGCATGAAGT CAGATCCTCGCTGGAGATCCCGCTGCCTAGAAGGGTCAGGATCTACGAGTCAAAGTATTA CATCCATGCGTATGAGACAAGTGGAACGCTGCATGAGAAGGTACTGCAACTTGCCAAGCT GAACTCCAACGTTCTGCAGCTCCATCATCAGCAAGAGCTGAAGATCCTTACAAGATGGTG GGAGGATATGCAGATCGGATCAAAACTTCCTTTCGCACGAGATAGAATCGTGGAGTGTTT TCTATGGATCTTAGGAGTATACTATGAACCGTGTCATTCAAGAGCCCGGATAATATTGAC AATGGTTATCGCCATCGTGACACTCTTGGACGATATTTTCGATTCTTTCGCGACCCCACA AGAATGTGAAATACTCACTAATTGCATCGAAAGCTGGGATCCCAAAGGGGCTCAAGACCT CCCAGGTTGCATGAAATTTGCTCTAGAGAAGATATTGGATAGCTACCAGACCATTACAAA TATGCTCCACCGAGAGGACAAGTATCGAATGACGTATCTAAGACACTTTACAGAAGATCT AGTGAGAAGCTTCAACATGGAGGTAAAAATGCTTCAAAAAGGTTACATCCCAGATTCTGT TGAAGAGCATCTTAAGGTTTCACTCAGAACTGGTGGGTGTCCCATCTTATCATGTGCTTG CTTTGTCGGGATGGATGATATAGCAACAAAGGATTTCTTTGATTGGATTTCTAGCGTACC CAAAATGGTGCGCGCACTTTCTATAATTCTGAGACTAGCAGACGATCTCCACTCGTATGA GCGGGAGCAGCTAATCCCTCATGTAGCTTCCACAATCGACACCTACATGAAAAAGCACAA TGTCTCAATTGAAGTGGCGCAGGAAAACATACACAAACTAAAAGAAGAGTCATGGAAAGA TTTAAATAGCGAGTGGCTAAATCCATGCAATGATGTGTATCCAAAGCAACTATTGGAGAG GATATTCAACTTGGCAAGGACGATGGAGTTCATGTACAACCAAGAGGACAATTTCACCAA CTGCCACAACCTTAAGGATACCATTCGCTGCTTGTTGGTAGAGCCATATAGGATCCACAT TTAGTTTTTGGCAACAAACTAATGAATTACAGTGTCCAGTTAATGTAATGCAGAGTTATA TGTCATCCTTATATGTGTTAGTATGTTTTCTCTAGTGTATGTAATATGGTGTCATCTCAT CCTCATGTGTGTCAATCTTCTTTTCATGTATAGTGTCAATATGTACACATATATGTGGCA TCATTTTTGTTTTCACCCTAGAGTTTACTCTTGTCGTATCATTTGCCCTTCCTTTTGGAC TTTTTATGTTAAAAGGACCATGTTGTGGTTTCGGAAACCGGG