Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d035658_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:39822203:39823723:-1 gene:Zm00001d035658 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGCGCCCGTACATCCCCAAACCCACCTTCGCATTCTGCCACTCCCTACTCGCCTCCCGC CTCCTCCCCTCTGCCGCCTCCCCAACCGCACCGCTCCTCCCCATCCAAGCCCTCCTCGTC ACCGCCGGCCTGCTCCCGCGCCACCCGGACCTCGCTCTGCTCGCGCTCAACTCGCTGCTC CACGCGCTCTCCCGCCGCGCCGCGCGCCCGGCCCACCCGCGCCTCGCGCTCCGCCTCCTC CGCCTCATGCTCTCTCCCGCCACGCCCCCGGCGCTCCCCGCTCCGGACCACCTCTCCTTC CCTTTCGCGCTCTCCGCCGCCGCCGCGCTCGACGCCAACCCGTCCTCCTCCGCCGCCGCC GGGACCGCACCTGGGCCGCAGCTCCACGCGCTGCTCGTCAGGAACGCGCTGTTCCCGGCC GACCACTACGTCACTACGGCGCTGCTCCAGCTGTACTCGCCCCGCCCGGACCTCGCGCGG AGGGTGTTCGACGAGCTGCCGCGGCGGGAGGCGATCCACTACGACCTGCTCATCGGCTCG TACGCGCGCGCGGGGGCGCCCGCCGAGGGTCTCTCGGTGTTCCGGACCATGCTCGACGAC GACGGGGTGACCCCGGACGCGGTCGTGCTGACGACGGCCGTGGCGGCGTGCGCGCAGGCG GGGGCGCTGGACCTCGGCGCGTGGGTGCATCGTTACGTGGAGCGCGCCGCGCCGGGGCTC CTCGCCGACGCCTTCCTCGGGTCCGCGCTCATCGGCATGTACGCCAAGTGCGGGTGCCTG GAGGAGGCCGTGCGGGTGTTCGACGGCATGCCCGAGCGGAACGCGTACGTATGGGCGACC ATGGTAGGCGCGCTCGCGGTGCACGGGATGGCAGCGGAAGCTGTCGCGTGCCTGGAGAGG ATGGCGCGGGAGGACGGGGTGCGGCCCGACGGCGTGGCGGTGCTCGGGGCGCTGTCCGCG TGCGCGCACGCCGGGGACGTCGAGGAAGGGCTGCGGCTTCTTGGGGAGATGCGGCCCCGG TACGGCGTCGTGCCCGGGCACGAGCACTACAGCTGCGCGGTCGACATGCTCTGCCGGGTC GGGCGGCTGGAGGACGCGGTGGGGCTCGTCAAGATCATGCCGATGGCCCCGCTCGCGTCC GTGTGGGGATCCGTGCTCGCCGGCTGCCGGAGCCACGGCAACGTCGAGCTGGCGGAGGTG GCGGCGCGCGAGCTCGAGAGGCTAGGTGGCTCCGCCGATGAGGGCGTGTACGTGCAGCTG TCCAACATCTACCTCGACGCCAACCGCAAGGATGACGCGCGTCGGGTGCGGAAGCTGATC GGCGGCCGGGGGATCAAGAAGCTCCCCGCGTATAGCGCGTTAGAGGTGGACGGCGAGGTG AGCTCGTTCGTCGCCGACGACCAAGCGCACCCGCGGCGCTTCGAGATCTGGGAGGTGCTC CGGCTGCTAGCCGACCAGATGGCGCAGAAACCAAACGAAGAAGAATCTGTCGAGCTCATT TGCGTGCTCGCAGGGATGTAA

Peptide Sequence

PEP ID	Zm00001d035658_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:39822203:39823723:-1 gene:Zm00001d035658 transcript:Zm00001d035658_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	MRPYIPKPTFAFCHSLLASRLLPSAASPTAPLLPIQALLVTAGLLPRHPDLALLALNSLL HALSRRAARPAHPRLALRLLRLMLSPATPPALPAPDHLSFPFALSAAAALDANPSSSAAA GTAPGPQLHALLVRNALFPADHYVTTALLQLYSPRPDLARRVFDELPRREAIHYDLLIGS YARAGAPAEGLSVFRTMLDDDGVTPDAVVLTTAVAACAQAGALDLGAWVHRYVERAAPGL LADAFLGSALIGMYAKCGCLEEAVRVFDGMPERNAYVWATMVGALAVHGMAAEAVACLER MAREDGVRPDGVAVLGALSACAHAGDVEEGLRLLGEMRPRYGVVPGHEHYSCAVDMLCRV GRLEDAVGLVKIMPMAPLASVWGSVLAGCRSHGNVELAEVAARELERLGGSADEGVYVQL SNIYLDANRKDDARRVRKLIGGRGIKKLPAYSALEVDGEVSSFVADDQAHPRRFEIWEVL RLLADQMAQKPNEEESVELICVLAGM

Transcript Sequence

Transcript ID	Zm00001d035658_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:39822203:39823723:-1 gene:Zm00001d035658 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGCGCCCGTACATCCCCAAACCCACCTTCGCATTCTGCCACTCCCTACTCGCCTCCCGC CTCCTCCCCTCTGCCGCCTCCCCAACCGCACCGCTCCTCCCCATCCAAGCCCTCCTCGTC ACCGCCGGCCTGCTCCCGCGCCACCCGGACCTCGCTCTGCTCGCGCTCAACTCGCTGCTC CACGCGCTCTCCCGCCGCGCCGCGCGCCCGGCCCACCCGCGCCTCGCGCTCCGCCTCCTC CGCCTCATGCTCTCTCCCGCCACGCCCCCGGCGCTCCCCGCTCCGGACCACCTCTCCTTC CCTTTCGCGCTCTCCGCCGCCGCCGCGCTCGACGCCAACCCGTCCTCCTCCGCCGCCGCC GGGACCGCACCTGGGCCGCAGCTCCACGCGCTGCTCGTCAGGAACGCGCTGTTCCCGGCC GACCACTACGTCACTACGGCGCTGCTCCAGCTGTACTCGCCCCGCCCGGACCTCGCGCGG AGGGTGTTCGACGAGCTGCCGCGGCGGGAGGCGATCCACTACGACCTGCTCATCGGCTCG TACGCGCGCGCGGGGGCGCCCGCCGAGGGTCTCTCGGTGTTCCGGACCATGCTCGACGAC GACGGGGTGACCCCGGACGCGGTCGTGCTGACGACGGCCGTGGCGGCGTGCGCGCAGGCG GGGGCGCTGGACCTCGGCGCGTGGGTGCATCGTTACGTGGAGCGCGCCGCGCCGGGGCTC CTCGCCGACGCCTTCCTCGGGTCCGCGCTCATCGGCATGTACGCCAAGTGCGGGTGCCTG GAGGAGGCCGTGCGGGTGTTCGACGGCATGCCCGAGCGGAACGCGTACGTATGGGCGACC ATGGTAGGCGCGCTCGCGGTGCACGGGATGGCAGCGGAAGCTGTCGCGTGCCTGGAGAGG ATGGCGCGGGAGGACGGGGTGCGGCCCGACGGCGTGGCGGTGCTCGGGGCGCTGTCCGCG TGCGCGCACGCCGGGGACGTCGAGGAAGGGCTGCGGCTTCTTGGGGAGATGCGGCCCCGG TACGGCGTCGTGCCCGGGCACGAGCACTACAGCTGCGCGGTCGACATGCTCTGCCGGGTC GGGCGGCTGGAGGACGCGGTGGGGCTCGTCAAGATCATGCCGATGGCCCCGCTCGCGTCC GTGTGGGGATCCGTGCTCGCCGGCTGCCGGAGCCACGGCAACGTCGAGCTGGCGGAGGTG GCGGCGCGCGAGCTCGAGAGGCTAGGTGGCTCCGCCGATGAGGGCGTGTACGTGCAGCTG TCCAACATCTACCTCGACGCCAACCGCAAGGATGACGCGCGTCGGGTGCGGAAGCTGATC GGCGGCCGGGGGATCAAGAAGCTCCCCGCGTATAGCGCGTTAGAGGTGGACGGCGAGGTG AGCTCGTTCGTCGCCGACGACCAAGCGCACCCGCGGCGCTTCGAGATCTGGGAGGTGCTC CGGCTGCTAGCCGACCAGATGGCGCAGAAACCAAACGAAGAAGAATCTGTCGAGCTCATT TGCGTGCTCGCAGGGATGTAA