Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035608_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:36528925:36534931:1 gene:Zm00001d035608 gene_biotype:protein_coding transcript_biotype:protein_coding description:phragmoplastin interacting protein 1
Sequence

ATGGTGCTCGCGCGCAAAAAGTTGAAGCTGAAGCTCCACACGCTCCTCCCAGCCGGCAAA
GCCGCGGAGGAGGAGCATGGAGAGGATGTGGAGGCCGTAAAGGAGAGGCTCGCATCCTCC
AAGCGGCTGCGCCCCAAGCGGGAGCGGAGGCCCAAGAAGAAGCTGTCGCTCCCCGAGGTG
GTGCGGCAGACGGAGGAGGAGATAAGGGAGGAGGTGGAGCGGAGGAGGGAGGAGAGGAGG
AAGGAGAAGAAGGAGAAAAGGAGGATCAGGAGGTTGATGGAGGCCGAGGCCGCGGAGCCG
GAAACGCAGCAGGTGGAGGGGGAGATAGGGGAGGCCGATTCTGCTGCCGGGTCTGAGTCT
GACCAGCCGGTCGAGGCAAAGGATAGCGACCAAAATATAAACAAGTTGGAAGTGACCAAC
CCCGCTGTTGGGTCCAACAATAACATTGTTCCAGACAATAGGCAGCAGAATCACAAAATG
CAGTTGGCCAAAACTGTTGTCGTGTCTGACAATCATGTAGTCGCAGAGCATAGGGAGCAA
AGCATAAAGAAGGTGTATGTTGGTGGCATCCCATACTATTCATCTGAGGATGACATAAGA
AGTTTCTTTGAAGCATGTGGTAGTATCACAATGATTGACTGCATGAATTTTCCCGAAAGC
GGGAAATTCAGGGGTATTGCGATTCTAACTTTCAAGACTGATGCTGCCGCACAGAGGGCA
TTAGCTATGGATGGTGCAGATATGGGAGGATTTTATTTGAAAATTCAGCCTTACAAACAT
AACCGTGAGAAGGAAGATTTTGCACCAAAGTTGATAGAGGGGTATAATAGGATATATGTT
GGAAATCTGCCATGGGATATAACAGATGATGATCTAAAAAAGTTCTTCTCCGAGTGCAAA
ATTTCATCCATCCGGTTTGGGACAGACAAGGAGACAGGTGGTTTCAAAGGCTACGCGCAT
GTTGATTTTTCTGACAGCGCGTCTCTTGCTGCTGCTTTGAAGCTCGACCAGAAGGTGATC
AAGGAACGCCCAGTCAGAATCAGATGTGCTGTTCCAAAAAAGGATAACCAAAAAGTCAAT
GACAATGGGAACTCAGATCATCTGAAAAGTAAAACTAGGACATGCTATGAATGCGGAACC
CCTGGGCACTTTTCTTCTTCTTGCCCTAATAAGAAGGATTCTGAAGCAAGGAAGTGCTAT
GAATGTGGCACCCCGGGGCACCTCTCTTCTGCTTGCCCAAATAAGAAGGATTCTGAAGTA
AGAAAGTGCTATGAATGTGGCACCGCTGGGCACCTGTCCTCTGCTTGCCCAAATAAGAAG
GATTCTGATGAAAAGGAGGATAATTCTAACTCCACCATAGCAGCCTCAAAGAAGAGGCGA
ACATGTTATGAATGTGGCATCCCTGGGCACCTCTCTTCTAATTGCCCAAACAAGAAGGAT
CCTGAATTTATTTCTGATGAAAAGAACACTAATGTTGATTCAGCTCCTGCATCGTCGAAG
AAGAGGCGGACATGTTATGAATGTGGAACTCCTGGCCATCTCTCATCGGCTTGCCCAAAC
AAAAGGACATCAGAATCTGTTCTGAACAACAGAGAGCCTGCTGACGCAAAACCTGCAACC
ACCATCAAGCCCGAGGAAACAAAAGCTGGCGATGAATCGAATTCAGTAGCTTCAAAGAAG
AGGCGAAAATGCTACGAGTGTGGCATCTCCGGTCATCTCTCCTCGGCTTGCCCCAGCAAA
AAGGCCGCTGAGCCTGTCTGCAACGAAGAGAAGCCTGGCAATCACTCAAACGCTGTACTA
CCAGTCGTTTCTGACGAAAAGAAGGCAAGTGAGGACGCAAAATCTGCACCTGCAAAGAAA
AAGAAGAGGCGGACATGCTACGAGTGCGGCATCGCTGGCCATCTCTCGTCGGAGTGCCCG
AACAAGGCAGCTGCTGTCTGCTGA

Peptide Sequence

PEP ID

Zm00001d035608_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:36528925:36534931:1 gene:Zm00001d035608 transcript:Zm00001d035608_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:phragmoplastin interacting protein 1
Sequence

MVLARKKLKLKLHTLLPAGKAAEEEHGEDVEAVKERLASSKRLRPKRERRPKKKLSLPEV
VRQTEEEIREEVERRREERRKEKKEKRRIRRLMEAEAAEPETQQVEGEIGEADSAAGSES
DQPVEAKDSDQNINKLEVTNPAVGSNNNIVPDNRQQNHKMQLAKTVVVSDNHVVAEHREQ
SIKKVYVGGIPYYSSEDDIRSFFEACGSITMIDCMNFPESGKFRGIAILTFKTDAAAQRA
LAMDGADMGGFYLKIQPYKHNREKEDFAPKLIEGYNRIYVGNLPWDITDDDLKKFFSECK
ISSIRFGTDKETGGFKGYAHVDFSDSASLAAALKLDQKVIKERPVRIRCAVPKKDNQKVN
DNGNSDHLKSKTRTCYECGTPGHFSSSCPNKKDSEARKCYECGTPGHLSSACPNKKDSEV
RKCYECGTAGHLSSACPNKKDSDEKEDNSNSTIAASKKRRTCYECGIPGHLSSNCPNKKD
PEFISDEKNTNVDSAPASSKKRRTCYECGTPGHLSSACPNKRTSESVLNNREPADAKPAT
TIKPEETKAGDESNSVASKKRRKCYECGISGHLSSACPSKKAAEPVCNEEKPGNHSNAVL
PVVSDEKKASEDAKSAPAKKKKRRTCYECGIAGHLSSECPNKAAAVC

Transcript Sequence

Transcript ID

Zm00001d035608_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:36528925:36534931:1 gene:Zm00001d035608 gene_biotype:protein_coding transcript_biotype:protein_coding description:phragmoplastin interacting protein 1
Sequence

TCCCACGAAAACCTGGCAGCCGCCGCCGAACTCGAAGCAGCAGCCATGGTGCTCGCGCGC
AAAAAGTTGAAGCTGAAGCTCCACACGCTCCTCCCAGCCGGCAAAGCCGCGGAGGAGGAG
CATGGAGAGGATGTGGAGGCCGTAAAGGAGAGGCTCGCATCCTCCAAGCGGCTGCGCCCC
AAGCGGGAGCGGAGGCCCAAGAAGAAGCTGTCGCTCCCCGAGGTGGTGCGGCAGACGGAG
GAGGAGATAAGGGAGGAGGTGGAGCGGAGGAGGGAGGAGAGGAGGAAGGAGAAGAAGGAG
AAAAGGAGGATCAGGAGGTTGATGGAGGCCGAGGCCGCGGAGCCGGAAACGCAGCAGGTG
GAGGGGGAGATAGGGGAGGCCGATTCTGCTGCCGGGTCTGAGTCTGACCAGCCGGTCGAG
GCAAAGGATAGCGACCAAAATATAAACAAGTTGGAAGTGACCAACCCCGCTGTTGGGTCC
AACAATAACATTGTTCCAGACAATAGGCAGCAGAATCACAAAATGCAGTTGGCCAAAACT
GTTGTCGTGTCTGACAATCATGTAGTCGCAGAGCATAGGGAGCAAAGCATAAAGAAGGTG
TATGTTGGTGGCATCCCATACTATTCATCTGAGGATGACATAAGAAGTTTCTTTGAAGCA
TGTGGTAGTATCACAATGATTGACTGCATGAATTTTCCCGAAAGCGGGAAATTCAGGGGT
ATTGCGATTCTAACTTTCAAGACTGATGCTGCCGCACAGAGGGCATTAGCTATGGATGGT
GCAGATATGGGAGGATTTTATTTGAAAATTCAGCCTTACAAACATAACCGTGAGAAGGAA
GATTTTGCACCAAAGTTGATAGAGGGGTATAATAGGATATATGTTGGAAATCTGCCATGG
GATATAACAGATGATGATCTAAAAAAGTTCTTCTCCGAGTGCAAAATTTCATCCATCCGG
TTTGGGACAGACAAGGAGACAGGTGGTTTCAAAGGCTACGCGCATGTTGATTTTTCTGAC
AGCGCGTCTCTTGCTGCTGCTTTGAAGCTCGACCAGAAGGTGATCAAGGAACGCCCAGTC
AGAATCAGATGTGCTGTTCCAAAAAAGGATAACCAAAAAGTCAATGACAATGGGAACTCA
GATCATCTGAAAAGTAAAACTAGGACATGCTATGAATGCGGAACCCCTGGGCACTTTTCT
TCTTCTTGCCCTAATAAGAAGGATTCTGAAGCAAGGAAGTGCTATGAATGTGGCACCCCG
GGGCACCTCTCTTCTGCTTGCCCAAATAAGAAGGATTCTGAAGTAAGAAAGTGCTATGAA
TGTGGCACCGCTGGGCACCTGTCCTCTGCTTGCCCAAATAAGAAGGATTCTGATGAAAAG
GAGGATAATTCTAACTCCACCATAGCAGCCTCAAAGAAGAGGCGAACATGTTATGAATGT
GGCATCCCTGGGCACCTCTCTTCTAATTGCCCAAACAAGAAGGATCCTGAATTTATTTCT
GATGAAAAGAACACTAATGTTGATTCAGCTCCTGCATCGTCGAAGAAGAGGCGGACATGT
TATGAATGTGGAACTCCTGGCCATCTCTCATCGGCTTGCCCAAACAAAAGGACATCAGAA
TCTGTTCTGAACAACAGAGAGCCTGCTGACGCAAAACCTGCAACCACCATCAAGCCCGAG
GAAACAAAAGCTGGCGATGAATCGAATTCAGTAGCTTCAAAGAAGAGGCGAAAATGCTAC
GAGTGTGGCATCTCCGGTCATCTCTCCTCGGCTTGCCCCAGCAAAAAGGCCGCTGAGCCT
GTCTGCAACGAAGAGAAGCCTGGCAATCACTCAAACGCTGTACTACCAGTCGTTTCTGAC
GAAAAGAAGGCAAGTGAGGACGCAAAATCTGCACCTGCAAAGAAAAAGAAGAGGCGGACA
TGCTACGAGTGCGGCATCGCTGGCCATCTCTCGTCGGAGTGCCCGAACAAGGCAGCTGCT
GTCTGCTGAGGGTTACGTTGCCTGAGCAAGGCAGACGCTGAGGTCAAACGATTGCTTCTT
TCGTTCTCCAGAATTTTAGTCTCGTGTTGTACTGTATGTTCCTTGATATGAGCAGTGAAG
TTATCTCTATGTCCCCGAAGAAGAAAAATCGAAGTTTTGTAGCAGGGAATGTAGGCATGG
TAGACAAGGTTTATTAATTTTTGGCATGTCAAATTTTGATTCCATGATACCACAGGATTC
ATTATCCGTCGGGAGAAGAGTCATTATTGTCATCATCATCTATATGAATTCTTTTGT