Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035562_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:6:33367726:33369350:1 gene:Zm00001d035562 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; Mannose-specific jacalin-related lectin; protein
Sequence

ATGGAGAACCCTGCGAGTGTGCTAGTTCTACCAGCGCAGTTCACCAAACTCACCTTCGGA
AACCTGTACATCCGCCGGGCCGGGCCGGGCAGCAGGGAGATAACCGAGGAGGGCAGGTGC
GACCTGGACAAGAGATACGTGAGTGACTTCCCCGTCTACGACGGCCGCGGCCCCGACGCC
AGCCTTGTGGCCCGCGTGCAGGGGATCACCAGCGAAATCGGGAACGCGCACCAACTGTTC
GTCGTTGTTTTCGACACCGACAGGCTCAAGGGCTCCACGCTCGTCACCAATGGCGTGATA
ACGGCCGGGTCTGACGAGTGGGCGATCTACGGCGGAACCGGGGTGTTTGCCATGGCGAGG
GGCGTCATAAGGAGAAGGTATCTCGCCGACAGGGCCGGCGGGAACACTGATGAGCTCAAC
ATGGATGTCTTCTGCCGGCCGTTTGGCTCACAGTCAGAGCTGCAAGATAAGATGCAGGTG
CAGGGGCAGGGCTCTAGCGTCACCAAGATTGGACTATGGGGTGGACCGGGAGGGTCGGCA
CAGGACATCACGGCGGAGCGGCCGCCGCAGCGTCTGCACAGCGTCACCGTTCGTGCTGGC
GTCGCCGTCGACTCCATCGAGTTCACCTATACTGACAGCGCTGGGCAGAGGCGCGCCGCT
GGGCGATGGGGTGGACTCGGGGGCAATGTTCGAACGATCGACCTTGGCGACGCCGAGGAT
GTCAGGGAAGTCTCGGGAACATACGGCGCATTTGAAGGTGCCACTACGCTGACCTCGCTC
AGGCTCGTCACCAGCAGCAGAACCTGGGGCCCCTGGGGTGTCGAGAACGGGACGCGTTTC
TCCGTCACGGCGCCCATCGGCAGCAGCATCGTGGGATTCTATGCGCGGGCGGGAACCAGG
CTCGTCGATGCTATCGGTGTTTACTTGCGTCAGATTTAA

Peptide Sequence

PEP ID

Zm00001d035562_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:6:33367726:33369350:1 gene:Zm00001d035562 transcript:Zm00001d035562_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; Mannose-specific jacalin-related lectin; protein
Sequence

MENPASVLVLPAQFTKLTFGNLYIRRAGPGSREITEEGRCDLDKRYVSDFPVYDGRGPDA
SLVARVQGITSEIGNAHQLFVVVFDTDRLKGSTLVTNGVITAGSDEWAIYGGTGVFAMAR
GVIRRRYLADRAGGNTDELNMDVFCRPFGSQSELQDKMQVQGQGSSVTKIGLWGGPGGSA
QDITAERPPQRLHSVTVRAGVAVDSIEFTYTDSAGQRRAAGRWGGLGGNVRTIDLGDAED
VREVSGTYGAFEGATTLTSLRLVTSSRTWGPWGVENGTRFSVTAPIGSSIVGFYARAGTR
LVDAIGVYLRQI

Transcript Sequence

Transcript ID

Zm00001d035562_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:33367726:33369350:1 gene:Zm00001d035562 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; Mannose-specific jacalin-related lectin; protein
Sequence

GGAGCAGGGAGAAGAACACAGGGCACACGCACTACACGCACGGCACGCAGATACATATAG
AGAGAGGTTAGCTATAGCTTGCACATCTATTTAACTAACTAACTAACTGGCTAGCTAGCT
CGATCCGCAGAGCAAAGCGAAAGCAGCAAGAAGCAAAGCAATGGAGAACCCTGCGAGTGT
GCTAGTTCTACCAGCGCAGTTCACCAAACTCACCTTCGGAAACCTGTACATCCGCCGGGC
CGGGCCGGGCAGCAGGGAGATAACCGAGGAGGGCAGGTGCGACCTGGACAAGAGATACGT
GAGTGACTTCCCCGTCTACGACGGCCGCGGCCCCGACGCCAGCCTTGTGGCCCGCGTGCA
GGGGATCACCAGCGAAATCGGGAACGCGCACCAACTGTTCGTCGTTGTTTTCGACACCGA
CAGGCTCAAGGGCTCCACGCTCGTCACCAATGGCGTGATAACGGCCGGGTCTGACGAGTG
GGCGATCTACGGCGGAACCGGGGTGTTTGCCATGGCGAGGGGCGTCATAAGGAGAAGGTA
TCTCGCCGACAGGGCCGGCGGGAACACTGATGAGCTCAACATGGATGTCTTCTGCCGGCC
GTTTGGCTCACAGTCAGAGCTGCAAGATAAGATGCAGGTGCAGGGGCAGGGCTCTAGCGT
CACCAAGATTGGACTATGGGGTGGACCGGGAGGGTCGGCACAGGACATCACGGCGGAGCG
GCCGCCGCAGCGTCTGCACAGCGTCACCGTTCGTGCTGGCGTCGCCGTCGACTCCATCGA
GTTCACCTATACTGACAGCGCTGGGCAGAGGCGCGCCGCTGGGCGATGGGGTGGACTCGG
GGGCAATGTTCGAACGATCGACCTTGGCGACGCCGAGGATGTCAGGGAAGTCTCGGGAAC
ATACGGCGCATTTGAAGGTGCCACTACGCTGACCTCGCTCAGGCTCGTCACCAGCAGCAG
AACCTGGGGCCCCTGGGGTGTCGAGAACGGGACGCGTTTCTCCGTCACGGCGCCCATCGG
CAGCAGCATCGTGGGATTCTATGCGCGGGCGGGAACCAGGCTCGTCGATGCTATCGGTGT
TTACTTGCGTCAGATTTAATTCGAATAATAGCAGGGGAGCTACTGCTAGCTACGTACCTG
CTCCATCCTCCATTATCCTTTATTTCAATTCGCTCATCATCGTCGTGTGTAAATTAAATA
AATAAAGCTCTTGTGCCCATATTATATATAGTTGTCATGGCCGTGCCGTGTCTATGTGCG
TATACAAGTTTGGCTCATATAATATTTATTCGATCT