Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035558_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:6:33062029:33063539:-1 gene:Zm00001d035558 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; Mannose-specific jacalin-related lectin; protein
Sequence

ATGGAGAACCCTCCGAGCATCCTAGTGACTCCCATGGCTCCGGCCATGTCGGCGCAGTTC
ACAAGAATAACCTTCAGCAACCTGTTTGTCCGTCGGGCTGGCCCAGGCAGCACGGAGCTG
ACCGTGGAGGGAAGGCCATCCGACCAGCTGGGCAGGAGAAACCTCACTGACAGCCCCGTA
TTTGACGGCCGTGGCCCTGACGCCAGCCTCGTGGCTCGCGTACAGGGAGTCGCTACCCAG
ATGGGCGACGTGCGCCAGTTGTACACCGTCGTGTTCCAGGAGAGGCCGCTCAAGGGCTCC
ACGCTCGTCACCGAAGGCGCGATGACAGAAGGGTCAGACGAGTGGGCGATCTACGGTGGA
ACTGGAGTGTTCGCGATGGCGAGAGGCGTCATAAGGAGAACGTTTCTTGCCGACACGAGC
GGCGGGAACTCCGACGAGCTTGCCGTGGAGGTTCTCTGCCCGGTGTTCCGCCCGGCGGCG
TTTGGCTCATCGTCGTCACAGCCAGCAGCAAAGGACATCAGCTCCACCGTCGTCGTCACC
AAGGTCGGAGTGTGGGGTGGAGAGGGAGGGTCGCTGCGATCGGTGTCTACCTGCGCCAAC
TTTAGTCTGGTTTCAGCAGCAGGACGGGTACTACAGATATGCTAG

Peptide Sequence

PEP ID

Zm00001d035558_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:6:33062029:33063539:-1 gene:Zm00001d035558 transcript:Zm00001d035558_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; Mannose-specific jacalin-related lectin; protein
Sequence

MENPPSILVTPMAPAMSAQFTRITFSNLFVRRAGPGSTELTVEGRPSDQLGRRNLTDSPV
FDGRGPDASLVARVQGVATQMGDVRQLYTVVFQERPLKGSTLVTEGAMTEGSDEWAIYGG
TGVFAMARGVIRRTFLADTSGGNSDELAVEVLCPVFRPAAFGSSSSQPAAKDISSTVVVT
KVGVWGGEGGSLRSVSTCANFSLVSAAGRVLQIC

Transcript Sequence

Transcript ID

Zm00001d035558_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:33062029:33063539:-1 gene:Zm00001d035558 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; Mannose-specific jacalin-related lectin; protein
Sequence

ATCCATCTATAAATACGCCAATTAGCAAACTAGAGCTACTAGCAGCAGGCCAATGGAGAA
CCCTCCGAGCATCCTAGTGACTCCCATGGCTCCGGCCATGTCGGCGCAGTTCACAAGAAT
AACCTTCAGCAACCTGTTTGTCCGTCGGGCTGGCCCAGGCAGCACGGAGCTGACCGTGGA
GGGAAGGCCATCCGACCAGCTGGGCAGGAGAAACCTCACTGACAGCCCCGTATTTGACGG
CCGTGGCCCTGACGCCAGCCTCGTGGCTCGCGTACAGGGAGTCGCTACCCAGATGGGCGA
CGTGCGCCAGTTGTACACCGTCGTGTTCCAGGAGAGGCCGCTCAAGGGCTCCACGCTCGT
CACCGAAGGCGCGATGACAGAAGGGTCAGACGAGTGGGCGATCTACGGTGGAACTGGAGT
GTTCGCGATGGCGAGAGGCGTCATAAGGAGAACGTTTCTTGCCGACACGAGCGGCGGGAA
CTCCGACGAGCTTGCCGTGGAGGTTCTCTGCCCGGTGTTCCGCCCGGCGGCGTTTGGCTC
ATCGTCGTCACAGCCAGCAGCAAAGGACATCAGCTCCACCGTCGTCGTCACCAAGGTCGG
AGTGTGGGGTGGAGAGGGAGGGTCGCTGCGATCGGTGTCTACCTGCGCCAACTTTAGTCT
GGTTTCAGCAGCAGGACGGGTACTACAGATATGCTAGATAAAGGTCTTATATATGTCATA
TGACCTATCATGGTCTTATATGTTCGATCGTCGTCGTGTCTGTATGTACATACATGGTTG
TCAAATAAAGCTCTTTGCATTTT