Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035512_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:30481710:30486777:1 gene:Zm00001d035512 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 81 description:Putative AP2/EREBP transcription factor superfamily protein

Sequence

ATGGAGCTGGATCTGAACGTGGCCGAGGTGGCGCCGGAGAAGCCATCGGCGGCGCTGGAG
GCGAGCGACTCGGGGTCCTCGGGCTCGTCGGTGCTGAACGCGGAGGCGGCATCGGCGGGC
GGCGGGGGGCCCGCGCCGGGGGAGGAGGGGTCAAGCTCGACGCCGGCCGTGCTCGAGTTC
AGCATCCTCAGGAGCGACAGCGACGCGGCCGGCGCGGACGCCGACGACGGCGACGCCACG
CCGTCGCCACCTCGCCACCACCAGCAGCAGCTCGTCACCCGGGAGCTCTTCCCGGCGCCG
CAGCATTGGGCCGAGCTCGGCTTCTTCCGCGCCGGCCCGCAGCAGCAGCCGGACATCAGG
GTCCTGCCGCACCCGCACCCGTACCCGCCCCCGCCGCCGCCCGCGCAGCCGCAGCAGGCC
AAGAAGAGCCGCCGCGGCCCGCGCTCCCGCAGCTCGCAGTACCGCGGCGTCACCTTCTAC
CGCCGCACCGGCCGCTGGGAGTCCCACATCTGGGATTGCGGGAAGCAGGTGTACTTAGGT
GGATTCGACACTGCTCATGCCGCTGCAAGGGCGTACGACCGAGCGGCGATCAAGTTCCGC
GGCGTCGACGCCGACATAAACTTCAACCTCAGCGACTACGACGACGATATGAAGCAGATG
AAGAGCCTGTCCAAGGAGGAGTTCGTTCACGCCCTGCGGCGGCAGAGCACCGGCTTCTCC
CGCGGCAGCTCCAAGTACAGGGGCGTCACCCTGCACAAGTGCGGCCGCTGGGAGGCGCGC
ATGGGGCAGTTCCTCGGCAAGAAGGTTGAGTACCGACTCGATATTCGATTCTCCCTGCCG
TTTCGTGACCCCAGGGCGTACGACAAGGCCGCGATCAAATGCAACGGTAGAGAGGCCGTG
ACGAACTTCGAGCCCAGCACGTACGACGGGGAGCTGCTGCTGACTGCTGAAGCTAGCGCA
GAAGTTGCTGACGACGTTGATCTGAACTTGAGCATCTCGCAACCGGCATCGTCCCAGAGC
CCCAAAAGAGACAAGAACTGCCTTGGTCCGCAGCTCCACCACCACCATGGGCGGCCGTTT
GACGGCTCCGCCGTTCTGAAGAAAACCAAGGCAAGCGCTAAATCGATGCTCCGTCTGAGC
TGTCGTCGGCGGGCCGCCCTCACCGGTCGTTCCTCCCTCATCTCGTGGCTGCCGAGCATC
TACCGCCTCGGTCTCACCCCTTCTTCATCACACACCATGAGATTGTTCATGCAGTGCAGT
ATGCAGCCTGAAGGTAGTGATGCATCAAGAAGAGATCCCAGCTGGGCAGCAGCAGCAGCA
TGGAAGGTGACCGCAGCTGCACCTCCTCCTCCTACCACCACCCTGTTGCCGTTGCCGCTG
CCGTCGACGTCGTCCGCTGCAGCATCATCAGGATTCTCCAATACCGCCACGACAGCTGCC
GCCGCCCCATCGGCCGCCTCCTCCCGCCGGTTCGACCCGCCGCCACCGTCGTCGTCCTCC
TCCTCGAGCCATCACCACCACCACCACCGCCGCTGA

Peptide Sequence

PEP ID

Zm00001d035512_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:30481710:30486777:1 gene:Zm00001d035512 transcript:Zm00001d035512_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 81 description:Putative AP2/EREBP transcription factor superfamily protein

Sequence

MELDLNVAEVAPEKPSAALEASDSGSSGSSVLNAEAASAGGGGPAPGEEGSSSTPAVLEF
SILRSDSDAAGADADDGDATPSPPRHHQQQLVTRELFPAPQHWAELGFFRAGPQQQPDIR
VLPHPHPYPPPPPPAQPQQAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLG
GFDTAHAAARAYDRAAIKFRGVDADINFNLSDYDDDMKQMKSLSKEEFVHALRRQSTGFS
RGSSKYRGVTLHKCGRWEARMGQFLGKKVEYRLDIRFSLPFRDPRAYDKAAIKCNGREAV
TNFEPSTYDGELLLTAEASAEVADDVDLNLSISQPASSQSPKRDKNCLGPQLHHHHGRPF
DGSAVLKKTKASAKSMLRLSCRRRAALTGRSSLISWLPSIYRLGLTPSSSHTMRLFMQCS
MQPEGSDASRRDPSWAAAAAWKVTAAAPPPPTTTLLPLPLPSTSSAAASSGFSNTATTAA
AAPSAASSRRFDPPPPSSSSSSSHHHHHHRR

Transcript Sequence

Transcript ID

Zm00001d035512_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:30481710:30486777:1 gene:Zm00001d035512 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 81 description:Putative AP2/EREBP transcription factor superfamily protein

Sequence

CCACTCTCCTTCTCCTATTCTATCTATATATCACCCGCCTCTTTTTTCTCCCTCACTCCG
CCACACCTTCCCTCTTCTTCCTCAGCTCCGTCGCCCACCGCCGGAGCTCCGAAAGGCCCC
GCGCCCGCCGCCTTTCCTGTAAAAAACCCAACCTTTAGCTAGCTAACCGCTCCTCTTCTC
CCCCTACTCCCCTTGCCCAAATCAGAGAAGATATTTAACGGAGGAGGGGAAGGAGAGGAT
ATTTAGCTGATTGTTGATTGGTGGTCCGGGGTACGGTGTTCTTGAGTCGTGAAGCGACCG
TACAGTGGCTAGGGCCGTCTCCGGGTTGCGTGCAGGATGGTCGTCAGAGATCGGGAGTGA
GGAGGCAGCTCGTGGTCGTGGAGGCTAAATGTACCGCAAGAACGACTCGGCACTCTCCTG
TTTCTACCTCTTCCTCCTCTGGTTCTTCTTCTTGAAATAGACCAGCGCCAGCCACCAGGT
AGCTACCTACTAGCTAGCAGCCCAGTTGCGACTGGGGACGGGCTGCTGCTTGCAAGTTGG
AATCTTGGAGCAGGAGCAGAGGAGCGGGAGATGGAGCTGGATCTGAACGTGGCCGAGGTG
GCGCCGGAGAAGCCATCGGCGGCGCTGGAGGCGAGCGACTCGGGGTCCTCGGGCTCGTCG
GTGCTGAACGCGGAGGCGGCATCGGCGGGCGGCGGGGGGCCCGCGCCGGGGGAGGAGGGG
TCAAGCTCGACGCCGGCCGTGCTCGAGTTCAGCATCCTCAGGAGCGACAGCGACGCGGCC
GGCGCGGACGCCGACGACGGCGACGCCACGCCGTCGCCACCTCGCCACCACCAGCAGCAG
CTCGTCACCCGGGAGCTCTTCCCGGCGCCGCAGCATTGGGCCGAGCTCGGCTTCTTCCGC
GCCGGCCCGCAGCAGCAGCCGGACATCAGGGTCCTGCCGCACCCGCACCCGTACCCGCCC
CCGCCGCCGCCCGCGCAGCCGCAGCAGGCCAAGAAGAGCCGCCGCGGCCCGCGCTCCCGC
AGCTCGCAGTACCGCGGCGTCACCTTCTACCGCCGCACCGGCCGCTGGGAGTCCCACATC
TGGGATTGCGGGAAGCAGGTGTACTTAGGTGGATTCGACACTGCTCATGCCGCTGCAAGG
GCGTACGACCGAGCGGCGATCAAGTTCCGCGGCGTCGACGCCGACATAAACTTCAACCTC
AGCGACTACGACGACGATATGAAGCAGATGAAGAGCCTGTCCAAGGAGGAGTTCGTTCAC
GCCCTGCGGCGGCAGAGCACCGGCTTCTCCCGCGGCAGCTCCAAGTACAGGGGCGTCACC
CTGCACAAGTGCGGCCGCTGGGAGGCGCGCATGGGGCAGTTCCTCGGCAAGAAGGTTGAG
TACCGACTCGATATTCGATTCTCCCTGCCGTTTCGTGACCCCAGGGCGTACGACAAGGCC
GCGATCAAATGCAACGGTAGAGAGGCCGTGACGAACTTCGAGCCCAGCACGTACGACGGG
GAGCTGCTGCTGACTGCTGAAGCTAGCGCAGAAGTTGCTGACGACGTTGATCTGAACTTG
AGCATCTCGCAACCGGCATCGTCCCAGAGCCCCAAAAGAGACAAGAACTGCCTTGGTCCG
CAGCTCCACCACCACCATGGGCGGCCGTTTGACGGCTCCGCCGTTCTGAAGAAAACCAAG
GCAAGCGCTAAATCGATGCTCCGTCTGAGCTGTCGTCGGCGGGCCGCCCTCACCGGTCGT
TCCTCCCTCATCTCGTGGCTGCCGAGCATCTACCGCCTCGGTCTCACCCCTTCTTCATCA
CACACCATGAGATTGTTCATGCAGTGCAGTATGCAGCCTGAAGGTAGTGATGCATCAAGA
AGAGATCCCAGCTGGGCAGCAGCAGCAGCATGGAAGGTGACCGCAGCTGCACCTCCTCCT
CCTACCACCACCCTGTTGCCGTTGCCGCTGCCGTCGACGTCGTCCGCTGCAGCATCATCA
GGATTCTCCAATACCGCCACGACAGCTGCCGCCGCCCCATCGGCCGCCTCCTCCCGCCGG
TTCGACCCGCCGCCACCGTCGTCGTCCTCCTCCTCGAGCCATCACCACCACCACCACCGC
CGCTGAGAATCGAAGAAGCCACACTGTAAATCTGCCGGGAAGCGGCTGGTGGCATCCGGC
CCGCTCCTCCCTCCGGGCGCCGCAACTTTTTTCGATCGGTTTTGCGCCGCCCGGGACGGG
TTGTAGTTGATCGATTGGATTCTTCATAACTGTATTTGCGTACTGCTTACACTACCCAAG
TGAAATCGAAAATGGCGCCTTCTCTCGTTG