Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035439_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:25561769:25573225:1 gene:Zm00001d035439 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:knotted related homeobox5 description: knotted related homeobox5
Sequence

ATGGAGGATCTGTACAGCATCCACCCGGGGATCTCGCGCCACGGGGCGGCGGCGACTAGC
GAGGCGTCCGGGGTCGCCGGTGGACCGGGCTCACCCCCGCCCCCGCCCCCGCCGGCGGCG
GATCTGACGGAGCTGGTCAAGGCGCAGATCGCCGGGCACCCACGCTACCCGTCCCTCCTC
TCCGCCTACATCGACTGCCGCAAGGTGGGCGCGCCGTCGGAGGTGGCCACGCTGCTGGAG
GAGATCGGCCGGGAGAGGTGCGCCGCCGCCTCCGCCGGCGGGGAGGTCGTCGGCATGGAC
CCCGAGCTCGACGAGTTCATGGAGACGTACTGCCGGTTGCTGGAGCGGTACAAGGAGGAG
CTGTCGCGGCCGTTCGACGAGGCGGCGTCCTTCCTCAGCAGCGTCAGGACGCAGCTCAGC
TCCCTCTGCGGCGGCGCCGCCTCGCTCTCCGATGAAATGGTGGAGTCCTCTGAGGACGAG
CCATGCTCAGGCGACACAGACGCGACGACAGACCCAGGGCAGGAGCACAGCTCGCGCCTG
GCCGACCGCGAGCTCAAGGAGATGCTGCTGAAGAAGTACAGCGGCTGCCTGAGCCGGCTG
CGGTCCGAGTTCCTGAAGAAGAGGAAGAAAGGGAAGCTGCCCAAGGACGCTCGGTCGGCG
CTGATGGACTGGTGGAACACGCACTACCGCTGGCCGTACCCTACGGAGGAGGATAAGGTG
AGGCTGGCGGCCATGACTGGGCTGGACCCGAAGCAGATCAACAACTGGTTCATCAACCAG
CGGAAGCGGCATTGGAAGCCGTCGGAGGACATGCGGTTCGCGCTCATGGAGGGCGGCGTC
TCCGGATCCTCCTCCGGGACGACGCTCTACTTCGACACGGGCACCATCGGGCCGTGA

Peptide Sequence

PEP ID

Zm00001d035439_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:25561769:25573225:1 gene:Zm00001d035439 transcript:Zm00001d035439_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:knotted related homeobox5 description: knotted related homeobox5
Sequence

MEDLYSIHPGISRHGAAATSEASGVAGGPGSPPPPPPPAADLTELVKAQIAGHPRYPSLL
SAYIDCRKVGAPSEVATLLEEIGRERCAAASAGGEVVGMDPELDEFMETYCRLLERYKEE
LSRPFDEAASFLSSVRTQLSSLCGGAASLSDEMVESSEDEPCSGDTDATTDPGQEHSSRL
ADRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKV
RLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGGVSGSSSGTTLYFDTGTIGP

Transcript Sequence

Transcript ID

Zm00001d035439_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:25561769:25573225:1 gene:Zm00001d035439 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:knotted related homeobox5 description: knotted related homeobox5
Sequence

CTCTGACTCAGAGAGAGAGAGAGCAGCCGAGCCGGTTCAACCCCATGAATACCGCTGCTG
CAGAGATCACGGCCTGCTTCTGCGTCTGCAGCTCCAGCAGTAGCAACAGCAGGGGCTGCA
GTGCAAACGACTGCTAGTTCCCCTTTCCCCGCATGATCTCTGCCCCTTCCCCTACCTTCT
CTTGTTCTTGCTTGCACGACCCTTTTCCTTGTGCGCTAGCTGCCGCTTCTTCTTCGTCTT
CCTGGAGCTCCCCGCATCCACACATGCCCCAAGAACCAGACAATAAAACAACACGGAACC
ATCGGAGTCTTTTTCTACTACTATTTCCAGCGATTTGATTATATGGATGTGTGCACAGGT
GCACGTAGATAGGTAGAATAGAAGGGAGATTATAGCTAGCTAGAGGCAGCGAGCAGCTCG
GTTGCTGGGACACGCGATCGAGCTACAGCAAAGAAGACTGCAGGGTGGCGCGGCGGGCAT
GGAGGATCTGTACAGCATCCACCCGGGGATCTCGCGCCACGGGGCGGCGGCGACTAGCGA
GGCGTCCGGGGTCGCCGGTGGACCGGGCTCACCCCCGCCCCCGCCCCCGCCGGCGGCGGA
TCTGACGGAGCTGGTCAAGGCGCAGATCGCCGGGCACCCACGCTACCCGTCCCTCCTCTC
CGCCTACATCGACTGCCGCAAGGTGGGCGCGCCGTCGGAGGTGGCCACGCTGCTGGAGGA
GATCGGCCGGGAGAGGTGCGCCGCCGCCTCCGCCGGCGGGGAGGTCGTCGGCATGGACCC
CGAGCTCGACGAGTTCATGGAGACGTACTGCCGGTTGCTGGAGCGGTACAAGGAGGAGCT
GTCGCGGCCGTTCGACGAGGCGGCGTCCTTCCTCAGCAGCGTCAGGACGCAGCTCAGCTC
CCTCTGCGGCGGCGCCGCCTCGCTCTCCGATGAAATGGTGGAGTCCTCTGAGGACGAGCC
ATGCTCAGGCGACACAGACGCGACGACAGACCCAGGGCAGGAGCACAGCTCGCGCCTGGC
CGACCGCGAGCTCAAGGAGATGCTGCTGAAGAAGTACAGCGGCTGCCTGAGCCGGCTGCG
GTCCGAGTTCCTGAAGAAGAGGAAGAAAGGGAAGCTGCCCAAGGACGCTCGGTCGGCGCT
GATGGACTGGTGGAACACGCACTACCGCTGGCCGTACCCTACGGAGGAGGATAAGGTGAG
GCTGGCGGCCATGACTGGGCTGGACCCGAAGCAGATCAACAACTGGTTCATCAACCAGCG
GAAGCGGCATTGGAAGCCGTCGGAGGACATGCGGTTCGCGCTCATGGAGGGCGGCGTCTC
CGGATCCTCCTCCGGGACGACGCTCTACTTCGACACGGGCACCATCGGGCCGTGATCGAT
GCGATAGATACCTCTGACGAATTGGGGGCAAATTGTTGGTTGATACTGAGATTAGTTACA
TTTTGTCGGATTCATTGTGTATATGCATGGGCGACAACGTGTATTGTCGGGTACACAGTA
TGTAGTGGCATGTAAAGACACCGTAACAATATAACATGAATTGTTCAATTGCCTGTTGCA