Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d035256_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:6:17760608:17765816:-1 gene:Zm00001d035256 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ragged seedling1 description:Protein SUPPRESSOR OF GENE SILENCING 3 homolog
Sequence	ATGTCGGGCTCCGGCGATCGTCGCGGCGGCGGTCCTCCGGGTTCCCATAGTGGCTGGGAA ACCATGGGGAAGAAGTCGAAGAAACCCGGGCAAGCCGGGGGGAGACAGTGGGCACCATGG AGTTCCACAAATGTGACACCTAACACAGCAAGGCCAGCATGGGGTGGCAGTGGTTCCTCG CACCCTTCTGGAACCAGCTGGGCTCAAGCTCCAGATCATGGTGCTGCTACCAGAGGCAAT CCTAGACCGCCATCACAAACATCGCGCCCTGTTCTGGCTCCACCTCTGGCAAATGGTTGG CAGTGGCAATCCAGGCCTCGCCCATCTGGATCTGAAGTCAAGAAGGATGATGCTCCTCCA TCTGGTTCTGTCCCTGAGGTGGAGAATGTTGATGGCAACAATACATCAGATGATGATGAT GATGATGACGATGATTTGAGTGATGATATCAGTGATGACTATGATTCTGACGCAAGTGAG AAAAGTTTTGAGACTCGAAAAACGAACAAGTGGTTCAAAGAGTTCTTTGAAGTATTGAAT ACATTGAGTTTGGAACAAATTAATGAACAAACTCGGCAATGGCATTGCCCGGCATGCAAA AATGGACCTGGGGCGATTGACTGGTACAAAGGGCTGCAGCCTTTAGTGAGTCATGCTAGA ACAAAGGGTTCTACAAGGGTTAAACTTCACAGGGAATTGGCTGCATTGCTGGAAGAGGAG CTTTCTCGCAGGGGAACTTCAGTGTTACCAGCGGGTGAACAATTTGGGAAATGGAAAGGA CTGCAAGAAAGCACTGATCGTGAGATAGTGTGGCCACCAATGGTTATTGTTATGAATACC TTCTTGGAAAAAGATGAAGATGATAAGTGGAAGGGCATGGGAAACCAAGAGCTCCTTGAT TATTTTGGAGAATATGAAGCAAGTAAAGCACGTCATGCCTATGGTCCCTCTGGGCACCGT GGTATGAGCGTGTTAATATTTGAAAGCTCAGCTGTGGGCTACATGGAAGCTGAACGTCTG CATAAACACTTTGTTAATCAAGGTACAGACAGGAATTCATGGCACCTACGCAAGGTTCGA TTTGTGCCTGGTGGGAAAAGGCAACTATATGGTTTCTTAGCAAACAAAGAGGATATGGAG GCATTTAACAAGCATTGCCATGGTAAAAGCCGTCTGAAGTATGAGATGAGGTCTTACAAT GAGATGGTGGTGATTCAAATGAAACAGATGAGTGAAGACAACCAACAACTGAATTACCTG AAGAACAAGATGGTTAAGACAGAGCAGCGATCTAAAGCAGTAGAAGAATCATTGGGTGTT GTTACCCAGAAGCTACGTGAGACTATTGAAGAAAATATATTTGTTAGGAGT

Peptide Sequence

PEP ID	Zm00001d035256_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:6:17760608:17765816:-1 gene:Zm00001d035256 transcript:Zm00001d035256_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ragged seedling1 description:Protein SUPPRESSOR OF GENE SILENCING 3 homolog
Sequence	MSGSGDRRGGGPPGSHSGWETMGKKSKKPGQAGGRQWAPWSSTNVTPNTARPAWGGSGSS HPSGTSWAQAPDHGAATRGNPRPPSQTSRPVLAPPLANGWQWQSRPRPSGSEVKKDDAPP SGSVPEVENVDGNNTSDDDDDDDDDLSDDISDDYDSDASEKSFETRKTNKWFKEFFEVLN TLSLEQINEQTRQWHCPACKNGPGAIDWYKGLQPLVSHARTKGSTRVKLHRELAALLEEE LSRRGTSVLPAGEQFGKWKGLQESTDREIVWPPMVIVMNTFLEKDEDDKWKGMGNQELLD YFGEYEASKARHAYGPSGHRGMSVLIFESSAVGYMEAERLHKHFVNQGTDRNSWHLRKVR FVPGGKRQLYGFLANKEDMEAFNKHCHGKSRLKYEMRSYNEMVVIQMKQMSEDNQQLNYL KNKMVKTEQRSKAVEESLGVVTQKLRETIEENIFVRS

Transcript Sequence

Transcript ID	Zm00001d035256_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:17760608:17765816:-1 gene:Zm00001d035256 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ragged seedling1 description:Protein SUPPRESSOR OF GENE SILENCING 3 homolog
Sequence	ACCACTCACCACAGTCTCCAGTCTCCACTGCATCTAAAAAAAAACGTAAAACCCCCACCA CGCCGTAGCGGAGAGAAGAGAAGAGAGGAGCGCGCGATCGATGTCGGGCTCCGGCGATCG TCGCGGCGGCGGTCCTCCGGGTTCCCATAGTGGCTGGGAAACCATGGGGAAGAAGTCGAA GAAACCCGGGCAAGCCGGGGGGAGACAGTGGGCACCATGGAGTTCCACAAATGTGACACC TAACACAGCAAGGCCAGCATGGGGTGGCAGTGGTTCCTCGCACCCTTCTGGAACCAGCTG GGCTCAAGCTCCAGATCATGGTGCTGCTACCAGAGGCAATCCTAGACCGCCATCACAAAC ATCGCGCCCTGTTCTGGCTCCACCTCTGGCAAATGGTTGGCAGTGGCAATCCAGGCCTCG CCCATCTGGATCTGAAGTCAAGAAGGATGATGCTCCTCCATCTGGTTCTGTCCCTGAGGT GGAGAATGTTGATGGCAACAATACATCAGATGATGATGATGATGATGACGATGATTTGAG TGATGATATCAGTGATGACTATGATTCTGACGCAAGTGAGAAAAGTTTTGAGACTCGAAA AACGAACAAGTGGTTCAAAGAGTTCTTTGAAGTATTGAATACATTGAGTTTGGAACAAAT TAATGAACAAACTCGGCAATGGCATTGCCCGGCATGCAAAAATGGACCTGGGGCGATTGA CTGGTACAAAGGGCTGCAGCCTTTAGTGAGTCATGCTAGAACAAAGGGTTCTACAAGGGT TAAACTTCACAGGGAATTGGCTGCATTGCTGGAAGAGGAGCTTTCTCGCAGGGGAACTTC AGTGTTACCAGCGGGTGAACAATTTGGGAAATGGAAAGGACTGCAAGAAAGCACTGATCG TGAGATAGTGTGGCCACCAATGGTTATTGTTATGAATACCTTCTTGGAAAAAGATGAAGA TGATAAGTGGAAGGGCATGGGAAACCAAGAGCTCCTTGATTATTTTGGAGAATATGAAGC AAGTAAAGCACGTCATGCCTATGGTCCCTCTGGGCACCGTGGTATGAGCGTGTTAATATT TGAAAGCTCAGCTGTGGGCTACATGGAAGCTGAACGTCTGCATAAACACTTTGTTAATCA AGGTACAGACAGGAATTCATGGCACCTACGCAAGGTTCGATTTGTGCCTGGTGGGAAAAG GCAACTATATGGTTTCTTAGCAAACAAAGAGGATATGGAGGCATTTAACAAGCATTGCCA TGGTAAAAGCCGTCTGAAGTATGAGATGAGGTCTTACAATGAGATGGTGGTGATTCAAAT GAAACAGATGAGTGAAGACAACCAACAACTGAATTACCTGAAGAACAAGATGGTTAAGAC AGAGCAGCGATCTAAAGCAGTAGAAGAATCATTGGGTGTTGTTACCCAGAAGCTACGTGA GACTATTGAAGAAAATATATTTGTTAGGAGT