Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035243_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:16653132:16655500:1 gene:Zm00001d035243 gene_biotype:protein_coding transcript_biotype:protein_coding description:Amino acid permease 6
Sequence

ATGGCCGACAGCAGGAGAAGTGTAGTGTACGATGCTGAAGGCGGCGACGATCATGAGAGG
CAAGGGACGGCGTGGACGGCGACGTCGCACATCGTGGCGGCGGTGGTGGGCTCCGGCGTG
CTGGCGCTGGCGTGGACGGTGGCGCAGCTGGGGTGGGTGGTGGGTCCCCTCGTGCTGGTG
GGCTTCTCTTGCGTGACCTACTACACGTCGGCGCTGCTCGCAGACTGCTACCGCTACCCG
GACCCCGTCCACGGCGCCGTCAACCGCGAGTACATCGACGCCGTCCGATGCTACCTGGAC
CGGAAGAACGTGGTGCTGTGCGGGTGCGCCCAGTACGTGAACCTGTGGGGCACTCTCGTC
GGCTACACCATCACCGCCAGCGCAAGCATGATCGCGATTAAGCGCGTCAACTGCTTCCAC
CGGGACGGCTACGGCGCCGCCGGCTGCAACCCGTCGGGGAGCACGTACATGGTGGTGTTC
GGGCTCTTCCAGCTCCTGCTGTCGCAGCTGCCCAGCCTCCACAACATCGCCTGGCTGTCC
GTGGTGGCCGTGGCCACCTCCCTGGGCTACTCCTTCATCAGCCTGGGCCTGTGCTCCGCC
AAGTGGGCCTCGCACGGCGGCCACGTGCGCGGCACGCTGGCGGGCGCCGCCGCCGTGGCC
GGCCGGGCCGACGACGACAAGCAGGCGGCCTTCAACGTGCTCCTCGCGCTCGGCAACATC
GCCTTCTCCTACACCTTCGCCGACGTGCTCATCGAGATCCAGGACACGCTGCGCTCGCCG
CCCGCCGAAAACCGCACCATGAAGCGGGCCTCCGCCTACGGCCTCGCCATCACCACCGTC
TTCTACCTCGCGCTCGGCTGCACCGGCTACGCCGCCTTCGGCGACCACGCGCCGGGGAAC
ATCCTCACGGGCTTCGCCTTCTACGAGCCCTTCTGGCTCGTCGACGCCGCCAACGTCTGC
GTCGTCCTGCACCTCGTCGGCGCCTACCAGGTCTTCGCGCAGCCCATCTTCGCGAGGCTC
GAGTCCTGCGTCGCCTGCCGCTGGCCCGACGCCAAGCTCATCAACGCCACCTACTACGTG
CGCGTGCCGCCATGCCTCCTCCTCCTCCGCACGTCGTCGTCCTCGTCGCCGCCGCCCACC
CTCGCCGTCGCGCCGCTCAAGCTCGTCCTGCGCACCATCGTCATCATGTTCACAACGCTC
GTCGCCATGCTGGTGCCCTTCTTCAACGCCGTGCTGGGCCTCATCGGCGCGCTCGGCTTC
TGGCCGCTCTCCGTCTACTTCCCCGTCAGCATGCACATGGCAAGGCTCAACATCCGACGC
GGAGAGATCCGCTGGTGGATGCTGCAGGCCATGAGCTTCGTCTGCCTCCTCATCTCCGTC
GCAGCCAGCATCGGATCCGTGCACGACATCGTGCACAACCTCAAGGCCGCCGCGCCATTC
AACACTGCAAACTGA

Peptide Sequence

PEP ID

Zm00001d035243_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:16653132:16655500:1 gene:Zm00001d035243 transcript:Zm00001d035243_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Amino acid permease 6
Sequence

MADSRRSVVYDAEGGDDHERQGTAWTATSHIVAAVVGSGVLALAWTVAQLGWVVGPLVLV
GFSCVTYYTSALLADCYRYPDPVHGAVNREYIDAVRCYLDRKNVVLCGCAQYVNLWGTLV
GYTITASASMIAIKRVNCFHRDGYGAAGCNPSGSTYMVVFGLFQLLLSQLPSLHNIAWLS
VVAVATSLGYSFISLGLCSAKWASHGGHVRGTLAGAAAVAGRADDDKQAAFNVLLALGNI
AFSYTFADVLIEIQDTLRSPPAENRTMKRASAYGLAITTVFYLALGCTGYAAFGDHAPGN
ILTGFAFYEPFWLVDAANVCVVLHLVGAYQVFAQPIFARLESCVACRWPDAKLINATYYV
RVPPCLLLLRTSSSSSPPPTLAVAPLKLVLRTIVIMFTTLVAMLVPFFNAVLGLIGALGF
WPLSVYFPVSMHMARLNIRRGEIRWWMLQAMSFVCLLISVAASIGSVHDIVHNLKAAAPF
NTAN

Transcript Sequence

Transcript ID

Zm00001d035243_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:16653132:16655500:1 gene:Zm00001d035243 gene_biotype:protein_coding transcript_biotype:protein_coding description:Amino acid permease 6
Sequence

GGCACGCACTCGCTCGCTCGCTCTCATACCCAGCTGACAACGAAGAGGTTTAGAGAGAGA
GAGCTGAGAGAATGGCCGACAGCAGGAGAAGTGTAGTGTACGATGCTGAAGGCGGCGACG
ATCATGAGAGGCAAGGGACGGCGTGGACGGCGACGTCGCACATCGTGGCGGCGGTGGTGG
GCTCCGGCGTGCTGGCGCTGGCGTGGACGGTGGCGCAGCTGGGGTGGGTGGTGGGTCCCC
TCGTGCTGGTGGGCTTCTCTTGCGTGACCTACTACACGTCGGCGCTGCTCGCAGACTGCT
ACCGCTACCCGGACCCCGTCCACGGCGCCGTCAACCGCGAGTACATCGACGCCGTCCGAT
GCTACCTGGACCGGAAGAACGTGGTGCTGTGCGGGTGCGCCCAGTACGTGAACCTGTGGG
GCACTCTCGTCGGCTACACCATCACCGCCAGCGCAAGCATGATCGCGATTAAGCGCGTCA
ACTGCTTCCACCGGGACGGCTACGGCGCCGCCGGCTGCAACCCGTCGGGGAGCACGTACA
TGGTGGTGTTCGGGCTCTTCCAGCTCCTGCTGTCGCAGCTGCCCAGCCTCCACAACATCG
CCTGGCTGTCCGTGGTGGCCGTGGCCACCTCCCTGGGCTACTCCTTCATCAGCCTGGGCC
TGTGCTCCGCCAAGTGGGCCTCGCACGGCGGCCACGTGCGCGGCACGCTGGCGGGCGCCG
CCGCCGTGGCCGGCCGGGCCGACGACGACAAGCAGGCGGCCTTCAACGTGCTCCTCGCGC
TCGGCAACATCGCCTTCTCCTACACCTTCGCCGACGTGCTCATCGAGATCCAGGACACGC
TGCGCTCGCCGCCCGCCGAAAACCGCACCATGAAGCGGGCCTCCGCCTACGGCCTCGCCA
TCACCACCGTCTTCTACCTCGCGCTCGGCTGCACCGGCTACGCCGCCTTCGGCGACCACG
CGCCGGGGAACATCCTCACGGGCTTCGCCTTCTACGAGCCCTTCTGGCTCGTCGACGCCG
CCAACGTCTGCGTCGTCCTGCACCTCGTCGGCGCCTACCAGGTCTTCGCGCAGCCCATCT
TCGCGAGGCTCGAGTCCTGCGTCGCCTGCCGCTGGCCCGACGCCAAGCTCATCAACGCCA
CCTACTACGTGCGCGTGCCGCCATGCCTCCTCCTCCTCCGCACGTCGTCGTCCTCGTCGC
CGCCGCCCACCCTCGCCGTCGCGCCGCTCAAGCTCGTCCTGCGCACCATCGTCATCATGT
TCACAACGCTCGTCGCCATGCTGGTGCCCTTCTTCAACGCCGTGCTGGGCCTCATCGGCG
CGCTCGGCTTCTGGCCGCTCTCCGTCTACTTCCCCGTCAGCATGCACATGGCAAGGCTCA
ACATCCGACGCGGAGAGATCCGCTGGTGGATGCTGCAGGCCATGAGCTTCGTCTGCCTCC
TCATCTCCGTCGCAGCCAGCATCGGATCCGTGCACGACATCGTGCACAACCTCAAGGCCG
CCGCGCCATTCAACACTGCAAACTGATTAATAAACATGCATTTACTAGTATATATACGGA
TCGGATCGGAGGAGTGATGGGTTAATTAGTTTCTTAATTAGCTTTGGCTACTATATCTAT
CAGTATCAGAGTCAGAGGAGCAGAGGGCCGGCCACATGCATGGCCTTTTTGTGTTTCTTG
ATTATATATCTGGCAAATTTGATCTGTCGAGCAGATTTTCATGCATGCATGCATGCTGCT
AATTCGGACGTACGTTGAACTAGTAATAATATTATTATTTGTAATGTAACCCCAGCAATG
CAATGCAATGCAAGAAGCAACAATAATATTTGCCAAA