Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d035228_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:15529973:15536315:-1 gene:Zm00001d035228 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyl-CpG-binding domain protein 4-like protein
Sequence	ATGTCGATCGCTTGGCTTCCATCTACAAATCCCGCCGCCGGCCCGCTGGCGATCGCTGAG GCGGTCCCCATCTCGATCTCCCTTGTCCAGTTCTTTTCGCCGGAGTGCACTATGTCGGCA CTGCCGCCGGCAGAGGAATTGGATGCGTCGCATCAGAAGAAGCGGCGGAGGAGGAAAAAG CACAGGGAGCAGGTGGAGGCTATAGCGGCATCCTCGGAGCCTCCTCCACCTCCGGCAAGC CCGGAGTCCAAGCCCAAGTCAACAATTCCAGTCGCTCCCGAAACCCTAACCTCAGCGGCG GTGAGGGAGTCTCCCCGACCTCTGGGAAACCCGGAATCTAAGTCCGAGTCGCCGCTACTA GTCGCTCCCGAAACCCTAGCCTCGGCGGTGATGGCAGCGGCGGCAGTGAGGCTGGTTAAG GAGCGCGAGAGGAAGAATCAGGTGGTGCCACCGGCATCTCCGTTAATGGAGGAGCCCGTG TGGAAGGAGGAAAAGCAGCGTAAGAAAAGGAAACACGTGGGCGCCGCACTGGTGGTTCCA TCGCCGCCGACTCCTGATGCGGCCCAAAACTTGCGGATGGAAGCCAAGATGATGGCTGAG GGGGCGACGGTGAGGAAGAAGCAGAGGCGGCTGAAGGCGGGGCAGGAGCAATCCGGCGAG CCACCATTTTCAATTGATGTCCATCCACAAGGAGGGGAAGAAGCTACTGATGATGGTGGC GTTGGCGTCATGGTCACTCAGTGTGTCAAGAGGAGCAAAAGCAAGAACTCCCGGGTTTTG AAGACGCAGCAGACACTGCCCCAAGGTTTTTTCCCTCCCATGGCCAATCCCAATTCCATT GATCAGGACCCCAATTATTCCTCACCTTTTGGTGCATTCTTTGCCCAATTCGCCTACAAA CCTGCTAATATCGCTGATCGCCCAGCGAGGCTGCCTCCTCGAGGCCACCCATCATCTGGG TCTTCTCTACTCACTGGAAAAGAGACCTCCAAGGCTGCCTGGACAGCAACCTCAAACACC AAGCAACCATGCCCAGCCTCAGAATCAACCTCAGATTCACAAGAAGAGGCAAGGATCGAA GGGAAAGAAAAGCCTGAGAAGAAGATGACAAGGGAGATGGCAGTGAGGGAGTCTACCCGA CATTTGGCAATACTGGAATCCATGTCTGCTTCCTCAGTCCCAGTCGCTCCCGAAACCCCA ACCTCGGCGGCGATGACAGCAGCGACAGTGATGCAGGATAAGGAGTGCAAGAGGGAGAAT CAGGAGGCACTGCCGGCAGCTCCATTAATTGAGGACCCTGTGCCGAAGGTAGAAAAGAGG CACAAGAAAAGAAAAGTGGCACAAATCACGCAGATGGAAAACAAGGTGATGACAGAGGGT GCGACGGTAAGGAAGAAACATAGGCGGCAGAAGGTGAAGCAGGAGCAATCTGGCCAAACA CCATTTCTCAATGATGTCTATTCAAAGGCAGGGGAAGAAGCTGCTGCTGGTGGCGTCATG GGCAGTCAGTGTGTCAAGAGGATCGACCGCAGCAAGAATTCCAAGGTTTTGAAGAAGCAG CAGACACTGCCCCAAGGCTTTTTCCCTCCCATAGCCAATCCCGATTTCATTGATCAGGAC CCCAATTATTGTTCTCCTTTTGGTGCATTTTTTGCCCAATTCGCCTACAAACCTGAGCGC CGGCAAGATGGGAATGGTTCGCCACTTCCTAGTACCACTGGTCGCACAGCGAGGCTGCCT CCTCGAGGCCACCCGTTATCTGGGTCTTCTCTGCTTACTGCAAAAGAGGTCTCCAAGGCT GCCCGGACAACAACCTTGAACACCAAGCAACCATGCCCAGCCTCAGAATCAACCTCAGAT TCACAAGAAGAGGCAAGGATCGAAGGGAAAGAAAAGCCTGAGAAGAAGATGACAAGGGAG ATGGCAGCGAGGGAGTCTCCCCGACATTTGGCAATACTGGAATCCATGTCTGCTTCCTCA GTCCCAGTCGCTCCCGAAACCCTAACCTCGGCGATGACAGCAGCGACAGTGATGCAGGAT AAGGAGCGCAAGAGGGAGAATCAGGAGGCGCTGCCGGCAGCTCCATTAATTGAGGACCCT GTGCCGAAGGTAGAAAAGAGGCACAAGAAAAGGAAGGATAGGGAGGCTGCAATGATTATA CCATCGGTGCCCACTGCTGCTGTGGCACAAATCACGCAGATGGAAAAGAAGGTGATGACA GAGGGTGCGACGGTAAGGAAGAAACATAGGCGGCGGAAGGTGGAGCAGGAGCAATCTGGC GAAACACCATTTCTCAATGATGTCTATTCAAGGGCAGGGGAAGAAGCTGCTGCTGGTGGC GTCATGGGCAGACAGTGTGTCAAGAGGATCAACCGCAGCAAGAATTCCAAGGTTTTGAAG AAGCAGCAGACACTGCCCCAAGGCTTTTTCCCTCCCATAGCTAATCCCGATTTCATTGAT CAGGACCCCAATTATTGTTCACCTTTTGGTGCATTTTTTGCCCAATTCGCCTACAAACCT GAGCGCCGGCAAGATGGGAATGGTTCGCCACTTCCTAGTACCACTGGTCGCACAGCGAGG CTGCCTCCTCGAGGCCACCCGTCATCTGGGTCTTCTCTGCTTACTGCAAAAGAGGTCTCC AAGGCTGCCCGGACAACAACCTTGAACACCAAGCAAGCATGCCCAGCCTCAGCATCAATC TCAAGTTCACAAGAAGGTGTAAGGGTCAAGGGAAAGAAAAAACCTGAGGAGAAAACGACA ATGGAGAAAAAGCCGAGGAAACCACCGATATTACTTAGTCCTGCCGAGAAGTGGTCAGAT AAATACCGCCGCCTGCCGCTGGATCAGCTGGTGCCCCCACCACGCTCCCCCCATAAGCTA TTGCAGGAGAAGTATGCTTCTGACCCCTGGAAGGTCATCGTAATATGCATGCTCCTCAAC TTAACACAGGGAAAACAGGTCAGGAAGAAAGTGAAGGGCTTCTTCAAGCGCTATCCTGAT GCTCAGACTGCATATACAGCTGATCCCGAAAAGATGGCAGAGTATCTAGCACCTCTTGGA CTGCAGCGTGTGAAAACAAACAGAATTCAGAAATTCTCTAAGGCTTACGTTGGAGAAGAA TGGACCTATATCACTGAGCTTTGTGGTGTTGGCAAGTATGCTGCTGATGCTTACGCAATC TTCTGTGCTGGAAGGGCAAACGAAGTGGTTCCAAAAGATCACAAGTTAGTAGATTACTGG AATTATGTCTGTTTTGAGTTACCCTCGATTCAGAAATCGCAGGAGGCTGGAGTGACGGAG CTGGGAAACCTTGTCGCTAAGGTGCAGGAAGTTGCTGTCAGCTGTTGA

Peptide Sequence

PEP ID	Zm00001d035228_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:15529973:15536315:-1 gene:Zm00001d035228 transcript:Zm00001d035228_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyl-CpG-binding domain protein 4-like protein
Sequence	MSIAWLPSTNPAAGPLAIAEAVPISISLVQFFSPECTMSALPPAEELDASHQKKRRRRKK HREQVEAIAASSEPPPPPASPESKPKSTIPVAPETLTSAAVRESPRPLGNPESKSESPLL VAPETLASAVMAAAAVRLVKERERKNQVVPPASPLMEEPVWKEEKQRKKRKHVGAALVVP SPPTPDAAQNLRMEAKMMAEGATVRKKQRRLKAGQEQSGEPPFSIDVHPQGGEEATDDGG VGVMVTQCVKRSKSKNSRVLKTQQTLPQGFFPPMANPNSIDQDPNYSSPFGAFFAQFAYK PANIADRPARLPPRGHPSSGSSLLTGKETSKAAWTATSNTKQPCPASESTSDSQEEARIE GKEKPEKKMTREMAVRESTRHLAILESMSASSVPVAPETPTSAAMTAATVMQDKECKREN QEALPAAPLIEDPVPKVEKRHKKRKVAQITQMENKVMTEGATVRKKHRRQKVKQEQSGQT PFLNDVYSKAGEEAAAGGVMGSQCVKRIDRSKNSKVLKKQQTLPQGFFPPIANPDFIDQD PNYCSPFGAFFAQFAYKPERRQDGNGSPLPSTTGRTARLPPRGHPLSGSSLLTAKEVSKA ARTTTLNTKQPCPASESTSDSQEEARIEGKEKPEKKMTREMAARESPRHLAILESMSASS VPVAPETLTSAMTAATVMQDKERKRENQEALPAAPLIEDPVPKVEKRHKKRKDREAAMII PSVPTAAVAQITQMEKKVMTEGATVRKKHRRRKVEQEQSGETPFLNDVYSRAGEEAAAGG VMGRQCVKRINRSKNSKVLKKQQTLPQGFFPPIANPDFIDQDPNYCSPFGAFFAQFAYKP ERRQDGNGSPLPSTTGRTARLPPRGHPSSGSSLLTAKEVSKAARTTTLNTKQACPASASI SSSQEGVRVKGKKKPEEKTTMEKKPRKPPILLSPAEKWSDKYRRLPLDQLVPPPRSPHKL LQEKYASDPWKVIVICMLLNLTQGKQVRKKVKGFFKRYPDAQTAYTADPEKMAEYLAPLG LQRVKTNRIQKFSKAYVGEEWTYITELCGVGKYAADAYAIFCAGRANEVVPKDHKLVDYW NYVCFELPSIQKSQEAGVTELGNLVAKVQEVAVSC

Transcript Sequence

Transcript ID	Zm00001d035228_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:15529973:15536315:-1 gene:Zm00001d035228 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyl-CpG-binding domain protein 4-like protein
Sequence	GACCCACATTCGTTCACTTCCCAATACTGGAGTGGATGGTAGAAAGGAGAGAGAGACCAC ACTATGTCGATCGCTTGGCTTCCATCTACAAATCCCGCCGCCGGCCCGCTGGCGATCGCT GAGGCGGTCCCCATCTCGATCTCCCTTGTCCAGTTCTTTTCGCCGGAGTGCACTATGTCG GCACTGCCGCCGGCAGAGGAATTGGATGCGTCGCATCAGAAGAAGCGGCGGAGGAGGAAA AAGCACAGGGAGCAGGTGGAGGCTATAGCGGCATCCTCGGAGCCTCCTCCACCTCCGGCA AGCCCGGAGTCCAAGCCCAAGTCAACAATTCCAGTCGCTCCCGAAACCCTAACCTCAGCG GCGGTGAGGGAGTCTCCCCGACCTCTGGGAAACCCGGAATCTAAGTCCGAGTCGCCGCTA CTAGTCGCTCCCGAAACCCTAGCCTCGGCGGTGATGGCAGCGGCGGCAGTGAGGCTGGTT AAGGAGCGCGAGAGGAAGAATCAGGTGGTGCCACCGGCATCTCCGTTAATGGAGGAGCCC GTGTGGAAGGAGGAAAAGCAGCGTAAGAAAAGGAAACACGTGGGCGCCGCACTGGTGGTT CCATCGCCGCCGACTCCTGATGCGGCCCAAAACTTGCGGATGGAAGCCAAGATGATGGCT GAGGGGGCGACGGTGAGGAAGAAGCAGAGGCGGCTGAAGGCGGGGCAGGAGCAATCCGGC GAGCCACCATTTTCAATTGATGTCCATCCACAAGGAGGGGAAGAAGCTACTGATGATGGT GGCGTTGGCGTCATGGTCACTCAGTGTGTCAAGAGGAGCAAAAGCAAGAACTCCCGGGTT TTGAAGACGCAGCAGACACTGCCCCAAGGTTTTTTCCCTCCCATGGCCAATCCCAATTCC ATTGATCAGGACCCCAATTATTCCTCACCTTTTGGTGCATTCTTTGCCCAATTCGCCTAC AAACCTGCTAATATCGCTGATCGCCCAGCGAGGCTGCCTCCTCGAGGCCACCCATCATCT GGGTCTTCTCTACTCACTGGAAAAGAGACCTCCAAGGCTGCCTGGACAGCAACCTCAAAC ACCAAGCAACCATGCCCAGCCTCAGAATCAACCTCAGATTCACAAGAAGAGGCAAGGATC GAAGGGAAAGAAAAGCCTGAGAAGAAGATGACAAGGGAGATGGCAGTGAGGGAGTCTACC CGACATTTGGCAATACTGGAATCCATGTCTGCTTCCTCAGTCCCAGTCGCTCCCGAAACC CCAACCTCGGCGGCGATGACAGCAGCGACAGTGATGCAGGATAAGGAGTGCAAGAGGGAG AATCAGGAGGCACTGCCGGCAGCTCCATTAATTGAGGACCCTGTGCCGAAGGTAGAAAAG AGGCACAAGAAAAGAAAAGTGGCACAAATCACGCAGATGGAAAACAAGGTGATGACAGAG GGTGCGACGGTAAGGAAGAAACATAGGCGGCAGAAGGTGAAGCAGGAGCAATCTGGCCAA ACACCATTTCTCAATGATGTCTATTCAAAGGCAGGGGAAGAAGCTGCTGCTGGTGGCGTC ATGGGCAGTCAGTGTGTCAAGAGGATCGACCGCAGCAAGAATTCCAAGGTTTTGAAGAAG CAGCAGACACTGCCCCAAGGCTTTTTCCCTCCCATAGCCAATCCCGATTTCATTGATCAG GACCCCAATTATTGTTCTCCTTTTGGTGCATTTTTTGCCCAATTCGCCTACAAACCTGAG CGCCGGCAAGATGGGAATGGTTCGCCACTTCCTAGTACCACTGGTCGCACAGCGAGGCTG CCTCCTCGAGGCCACCCGTTATCTGGGTCTTCTCTGCTTACTGCAAAAGAGGTCTCCAAG GCTGCCCGGACAACAACCTTGAACACCAAGCAACCATGCCCAGCCTCAGAATCAACCTCA GATTCACAAGAAGAGGCAAGGATCGAAGGGAAAGAAAAGCCTGAGAAGAAGATGACAAGG GAGATGGCAGCGAGGGAGTCTCCCCGACATTTGGCAATACTGGAATCCATGTCTGCTTCC TCAGTCCCAGTCGCTCCCGAAACCCTAACCTCGGCGATGACAGCAGCGACAGTGATGCAG GATAAGGAGCGCAAGAGGGAGAATCAGGAGGCGCTGCCGGCAGCTCCATTAATTGAGGAC CCTGTGCCGAAGGTAGAAAAGAGGCACAAGAAAAGGAAGGATAGGGAGGCTGCAATGATT ATACCATCGGTGCCCACTGCTGCTGTGGCACAAATCACGCAGATGGAAAAGAAGGTGATG ACAGAGGGTGCGACGGTAAGGAAGAAACATAGGCGGCGGAAGGTGGAGCAGGAGCAATCT GGCGAAACACCATTTCTCAATGATGTCTATTCAAGGGCAGGGGAAGAAGCTGCTGCTGGT GGCGTCATGGGCAGACAGTGTGTCAAGAGGATCAACCGCAGCAAGAATTCCAAGGTTTTG AAGAAGCAGCAGACACTGCCCCAAGGCTTTTTCCCTCCCATAGCTAATCCCGATTTCATT GATCAGGACCCCAATTATTGTTCACCTTTTGGTGCATTTTTTGCCCAATTCGCCTACAAA CCTGAGCGCCGGCAAGATGGGAATGGTTCGCCACTTCCTAGTACCACTGGTCGCACAGCG AGGCTGCCTCCTCGAGGCCACCCGTCATCTGGGTCTTCTCTGCTTACTGCAAAAGAGGTC TCCAAGGCTGCCCGGACAACAACCTTGAACACCAAGCAAGCATGCCCAGCCTCAGCATCA ATCTCAAGTTCACAAGAAGGTGTAAGGGTCAAGGGAAAGAAAAAACCTGAGGAGAAAACG ACAATGGAGAAAAAGCCGAGGAAACCACCGATATTACTTAGTCCTGCCGAGAAGTGGTCA GATAAATACCGCCGCCTGCCGCTGGATCAGCTGGTGCCCCCACCACGCTCCCCCCATAAG CTATTGCAGGAGAAGTATGCTTCTGACCCCTGGAAGGTCATCGTAATATGCATGCTCCTC AACTTAACACAGGGAAAACAGGTCAGGAAGAAAGTGAAGGGCTTCTTCAAGCGCTATCCT GATGCTCAGACTGCATATACAGCTGATCCCGAAAAGATGGCAGAGTATCTAGCACCTCTT GGACTGCAGCGTGTGAAAACAAACAGAATTCAGAAATTCTCTAAGGCTTACGTTGGAGAA GAATGGACCTATATCACTGAGCTTTGTGGTGTTGGCAAGTATGCTGCTGATGCTTACGCA ATCTTCTGTGCTGGAAGGGCAAACGAAGTGGTTCCAAAAGATCACAAGTTAGTAGATTAC TGGAATTATGTCTGTTTTGAGTTACCCTCGATTCAGAAATCGCAGGAGGCTGGAGTGACG GAGCTGGGAAACCTTGTCGCTAAGGTGCAGGAAGTTGCTGTCAGCTGTTGACATGGGAAA ACAGTAACGCGGTGGCAAGCGCTTTTGGTGTTTCTGCTTGCAGCTTAATAATGTTATTCG CTCCGTTCTTTTTTTATCTGTCATGTTTTAGTTCAAAAATATTCGAGGACTGAGGTAGTA TAATATATGGGGTATTTATCTAGTTATTGGGGTAGCCTATGTTTCAATGCTGGTTTTGAG ACAAAAATTGAAGGTAACTAGCCAAAAGGAAGAAAGAAAAGTGCTGATTTTGTGTGCATC CTGCATGCCCAAGAATCCTATCTTTAAAGTCCTGAATCTATGGAAAACTTAAACTCCCAA TGCATGCGTATTGTATTCAATTAATATGCATGCATGTGTGTGTGGAGGTGTAGCGCGCGT GGCTCTAAGAAGTCAAATGATCAATTGATTTGGTGATAGTGCAATCAATGGGACTAACCA ATGTGGTGTTTGGTTTACCATGTGTAATGGTATCGCAATGGAAGTTAAAAAGCGGTGGAT TTTAAATCAATGAATACCATTACAT