Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035212_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:10035680:10040260:1 gene:Zm00001d035212 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloroplast stem-loop binding protein of 41 kDa b chloroplastic
Sequence

ATGGGGGGGACTAGGTTCATCGGGGTCTTCCTGTCCAGGCTCCTTGTCAAGGAGGGCCAC
CAGGTCACATTGTTCACCAGGGGAAAGGCACCCATAACTCAGCAGCTGCCAGGGGAGTCC
GACGCGGAGTACGCAGACTTCTCCTCCAAGGTTCTGCACTTGAAAGGTGACAGGCAGGAC
TTCGAATTCGTGAAGACAAGCTTGGCTGCCAATGGATACGATGTGGTTTACGACATCAAT
GGACGTGAGGCTGTGCAAGTTGAGCCCATAATTGAGGCCTTGCCTAACCTGCAACAGTAC
ATCTATTGCTCATCGGCAGGAGTGTACCTGAAATCTGACATTCTTCCGCACTGTGAGGTG
GTTGACGCGGTGGACCCCAAGAGCCGTCACAAGGGCAAGCTGGAGACGGAGAGCCTGCTG
ACCTCGCGCGGCGTGAACTGGACGTCCATCAGGCCCGTGTACATCTACGGCCCGCTCAAC
TACAACCCCGTCGAGGAGTGGTTTTTCCACCGCCTCAAGGCCGGCCGCCCCATCCCCATC
CCCGGCGCCGGCAACCAGATCACGCAGCTCGGCCATGTCAAGGATCTGGCAAGAGCCTTC
AACCTGGTGCTCGGGAACCCCAAGGCGAGCAAGCAGATCTTCAACATCTCCGGGGCCAAG
TATGTCACCTTCGACGGCCTTGCGCGGGCATGCGCAAAGGCTGGAGGGTTCCCTGAGCCG
GAGCTCGTCCACTACAACCCCAAGGAATTCGACTTCGGAAAGAAGAAGGCCTTCCCATTC
AGAGACCAGCACTTCTTTGCGTCTGTGGAGAAGGCGACGAGCGAACTCGGGTGGACGCCG
GAGTTTGACCTCGTCCAGGGGCTCACCAACTCGTACAACCTCGACTTCGGCCGCGGCACG
TTCCGGAAGGAGGCGGACTTCACCACAGACGACATGATCCTCGACAAGAAGCTTGCCACC
GTTTGA

Peptide Sequence

PEP ID

Zm00001d035212_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:10035680:10040260:1 gene:Zm00001d035212 transcript:Zm00001d035212_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloroplast stem-loop binding protein of 41 kDa b chloroplastic
Sequence

MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDAEYADFSSKVLHLKGDRQD
FEFVKTSLAANGYDVVYDINGREAVQVEPIIEALPNLQQYIYCSSAGVYLKSDILPHCEV
VDAVDPKSRHKGKLETESLLTSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI
PGAGNQITQLGHVKDLARAFNLVLGNPKASKQIFNISGAKYVTFDGLARACAKAGGFPEP
ELVHYNPKEFDFGKKKAFPFRDQHFFASVEKATSELGWTPEFDLVQGLTNSYNLDFGRGT
FRKEADFTTDDMILDKKLATV

Transcript Sequence

Transcript ID

Zm00001d035212_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:10035680:10040260:1 gene:Zm00001d035212 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloroplast stem-loop binding protein of 41 kDa b chloroplastic
Sequence

ATTAGCACAGACTGAAGCGCAACTAGAGGATACAGCCATCCATTGGTAGTACACAGGGTC
CCACCCACAAGAGAGGCATGGCGGCCACATCGTCCCTGAAGAGCAGCCTTCTCCTCCCGT
CTACCATCTCCGACTTCAGTGGCGCAGCCGCAGCCGTCTCCATCTCAACGCAGCGCCACC
ATGGAATTTGATTTGGCAGAAGAGGAGATCACGGGGGGCGAGGGTGCAGGTCTCAGCGGC
TGCGGACTCCAAGAACATTCTGGTCATGGGGGGGACTAGGTTCATCGGGGTCTTCCTGTC
CAGGCTCCTTGTCAAGGAGGGCCACCAGGTCACATTGTTCACCAGGGGAAAGGCACCCAT
AACTCAGCAGCTGCCAGGGGAGTCCGACGCGGAGTACGCAGACTTCTCCTCCAAGGTTCT
GCACTTGAAAGGTGACAGGCAGGACTTCGAATTCGTGAAGACAAGCTTGGCTGCCAATGG
ATACGATGTGGTTTACGACATCAATGGACGTGAGGCTGTGCAAGTTGAGCCCATAATTGA
GGCCTTGCCTAACCTGCAACAGTACATCTATTGCTCATCGGCAGGAGTGTACCTGAAATC
TGACATTCTTCCGCACTGTGAGGTGGTTGACGCGGTGGACCCCAAGAGCCGTCACAAGGG
CAAGCTGGAGACGGAGAGCCTGCTGACCTCGCGCGGCGTGAACTGGACGTCCATCAGGCC
CGTGTACATCTACGGCCCGCTCAACTACAACCCCGTCGAGGAGTGGTTTTTCCACCGCCT
CAAGGCCGGCCGCCCCATCCCCATCCCCGGCGCCGGCAACCAGATCACGCAGCTCGGCCA
TGTCAAGGATCTGGCAAGAGCCTTCAACCTGGTGCTCGGGAACCCCAAGGCGAGCAAGCA
GATCTTCAACATCTCCGGGGCCAAGTATGTCACCTTCGACGGCCTTGCGCGGGCATGCGC
AAAGGCTGGAGGGTTCCCTGAGCCGGAGCTCGTCCACTACAACCCCAAGGAATTCGACTT
CGGAAAGAAGAAGGCCTTCCCATTCAGAGACCAGCACTTCTTTGCGTCTGTGGAGAAGGC
GACGAGCGAACTCGGGTGGACGCCGGAGTTTGACCTCGTCCAGGGGCTCACCAACTCGTA
CAACCTCGACTTCGGCCGCGGCACGTTCCGGAAGGAGGCGGACTTCACCACAGACGACAT
GATCCTCGACAAGAAGCTTGCCACCGTTTGATGCATGTCTCGGGCTAGCTGTACGTACGT
ACGATTAGAGAAGAGATAAATGATAGCAAATCAAAATTTGTTGTTAAGTAAAGTGAGCTC
TTAGCTTCTATCAGGGACGATTATTAAGGATACCCGAATTATTCCTCCCAAGAACACACT
CAGAGAAGTAAGGTACCTCTTAGGCCGAGGCTTCTCCTCGAGAGTCTCCCACCTCGGGCA
TAACTCCGCCTCGCCCCGAGCTGATCCCCGACAGATAAGATAAAAGCGCCTAAAAATAGG
AAGG