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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035082_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:4052637:4054293:1 gene:Zm00001d035082 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endoglucanase 1
Sequence

ATGGAGACCCAGAGCAGGTTGCTCGTCAGCCTGTGCGCCGCCGTGCTGCTGCTGCTGCTC
CTCGCTCCGGGCCTCGCCGCTGCCTTCAACTACGCCGACGCGCTCGCCAATAGTAGTCTC
TTGCTCGCACTGTCCACGTCCACGAAGGCACCGATGGGCGATGGCCACCTCACCTCGATT
GTACATCTATATCCGGACGGAGTGCAGGTGGACCTGGTGGGCGGGTACTACGACGCCGGC
GACAACGTCAAGTTCGGCCTGCCCATGGCGTTCACCACCACGATGCTGGCGTGGAGCGTG
GCGGACATGGGCAAGTTCATGGGGGCCGAGCTGCCGCACGCCAGGGCCGCCGTGCGCTGG
GGCGCCGACTACCTGCTCAAGGCCGCCACGTCGACCCCGGGCACGCTCTACGTCCAGGTG
GGCGACCCGGCGCAGGACCACCGGTGCTGGGAGCGGCCGGAGGACATGGACACAGCGCGG
GCCGTGTACGCCGTGGGCGCCGGGGGCGCGCCGGGCTCCGACGTGGCCGCCGAGACGGCC
GCGGCGCTGGCGGCGTCCGCCGTTGCGCTCCGCCGCGCCGACCCGGCGTACGCGGCCCGC
CTGGTCCGCGCCGCAGTGCTGGCGTTCGAGCTCGCCGACCGCCACCGGGGCTCCTACAGC
GCGGGGGCGCTCAGCTCCGCGGTCTGCCCGTTCTACTGCTCCTACTCCGGGTACGAGGAC
GAGCTGCTGTGGGCGGCCGCGTGGCTGCACCGCGCCTCTGGCAACGCCACCTTCATGGCG
TACGTGCGCGCCAACGGCGCCCAGGACGGCGCGGGGGACGACGACTACTCCTTCAGCTGG
GACGACAAGCGCATCGGCACCAAGGTGCTGCTGGCCAGGGCCGTCCTGCGCCGGGACCGG
GGCCGGAACCTCCCGGGGCTGCAGCCCTACAAGGCGCACTCCGACAGCTACATCTGCTCG
CTGGTGCCCGGCGCCAGCGGGTTCCAGGCCGGGCAGTACACCCCGGGCGGGCTCCTCTAC
CGTGAAGGCAGCAGCAACATGCAGTACGTGACGGCGACCACGTTCCTGCTGCTGGCGTAC
GCCAAGTACCTCCGGTCCGCCGGCGCCACCGCGGCGTGCGGCGGCGGGCGGGGCGAGGTG
GCCCCCGCGGAGCTGGTGGCGCTGGCGAAGCGCCAGGTGGACTACATCCTGGGGAAGAAC
CCCGCCGGGACGTCCTACATGGTGGGGTTCGGGGACCGGTACCCGCGCCGGCTGCACCAC
CGCGGCGCGTCCATGCCGTCGGTGCGCGCGCACCCGGCAAGGATCGGCTGCGACCAGGGG
TTCGCGTACCTGCACTCGGCGGCGCCCGACGCCAATGTGCTGGTGGGCGCCGTCGTGGGC
GGGCCCGACGCGCGCGACGGATTCGTCGACGACCGCGACAGCTACGGCCAGACCGAGCCC
GCCACCTACATCAACGCGCCGCTCGTCGGCGTGCTCGCTTACTTCGCCGGCACCACCAAG
TATTGA

Peptide Sequence

PEP ID

Zm00001d035082_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:4052637:4054293:1 gene:Zm00001d035082 transcript:Zm00001d035082_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endoglucanase 1
Sequence

METQSRLLVSLCAAVLLLLLLAPGLAAAFNYADALANSSLLLALSTSTKAPMGDGHLTSI
VHLYPDGVQVDLVGGYYDAGDNVKFGLPMAFTTTMLAWSVADMGKFMGAELPHARAAVRW
GADYLLKAATSTPGTLYVQVGDPAQDHRCWERPEDMDTARAVYAVGAGGAPGSDVAAETA
AALAASAVALRRADPAYAARLVRAAVLAFELADRHRGSYSAGALSSAVCPFYCSYSGYED
ELLWAAAWLHRASGNATFMAYVRANGAQDGAGDDDYSFSWDDKRIGTKVLLARAVLRRDR
GRNLPGLQPYKAHSDSYICSLVPGASGFQAGQYTPGGLLYREGSSNMQYVTATTFLLLAY
AKYLRSAGATAACGGGRGEVAPAELVALAKRQVDYILGKNPAGTSYMVGFGDRYPRRLHH
RGASMPSVRAHPARIGCDQGFAYLHSAAPDANVLVGAVVGGPDARDGFVDDRDSYGQTEP
ATYINAPLVGVLAYFAGTTKY

Transcript Sequence

Transcript ID

Zm00001d035082_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:4052637:4054293:1 gene:Zm00001d035082 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endoglucanase 1
Sequence

ATGGAGACCCAGAGCAGGTTGCTCGTCAGCCTGTGCGCCGCCGTGCTGCTGCTGCTGCTC
CTCGCTCCGGGCCTCGCCGCTGCCTTCAACTACGCCGACGCGCTCGCCAATAGTAGTCTC
TTGCTCGCACTGTCCACGTCCACGAAGGCACCGATGGGCGATGGCCACCTCACCTCGATT
GTACATCTATATCCGGACGGAGTGCAGGTGGACCTGGTGGGCGGGTACTACGACGCCGGC
GACAACGTCAAGTTCGGCCTGCCCATGGCGTTCACCACCACGATGCTGGCGTGGAGCGTG
GCGGACATGGGCAAGTTCATGGGGGCCGAGCTGCCGCACGCCAGGGCCGCCGTGCGCTGG
GGCGCCGACTACCTGCTCAAGGCCGCCACGTCGACCCCGGGCACGCTCTACGTCCAGGTG
GGCGACCCGGCGCAGGACCACCGGTGCTGGGAGCGGCCGGAGGACATGGACACAGCGCGG
GCCGTGTACGCCGTGGGCGCCGGGGGCGCGCCGGGCTCCGACGTGGCCGCCGAGACGGCC
GCGGCGCTGGCGGCGTCCGCCGTTGCGCTCCGCCGCGCCGACCCGGCGTACGCGGCCCGC
CTGGTCCGCGCCGCAGTGCTGGCGTTCGAGCTCGCCGACCGCCACCGGGGCTCCTACAGC
GCGGGGGCGCTCAGCTCCGCGGTCTGCCCGTTCTACTGCTCCTACTCCGGGTACGAGGAC
GAGCTGCTGTGGGCGGCCGCGTGGCTGCACCGCGCCTCTGGCAACGCCACCTTCATGGCG
TACGTGCGCGCCAACGGCGCCCAGGACGGCGCGGGGGACGACGACTACTCCTTCAGCTGG
GACGACAAGCGCATCGGCACCAAGGTGCTGCTGGCCAGGGCCGTCCTGCGCCGGGACCGG
GGCCGGAACCTCCCGGGGCTGCAGCCCTACAAGGCGCACTCCGACAGCTACATCTGCTCG
CTGGTGCCCGGCGCCAGCGGGTTCCAGGCCGGGCAGTACACCCCGGGCGGGCTCCTCTAC
CGTGAAGGCAGCAGCAACATGCAGTACGTGACGGCGACCACGTTCCTGCTGCTGGCGTAC
GCCAAGTACCTCCGGTCCGCCGGCGCCACCGCGGCGTGCGGCGGCGGGCGGGGCGAGGTG
GCCCCCGCGGAGCTGGTGGCGCTGGCGAAGCGCCAGGTGGACTACATCCTGGGGAAGAAC
CCCGCCGGGACGTCCTACATGGTGGGGTTCGGGGACCGGTACCCGCGCCGGCTGCACCAC
CGCGGCGCGTCCATGCCGTCGGTGCGCGCGCACCCGGCAAGGATCGGCTGCGACCAGGGG
TTCGCGTACCTGCACTCGGCGGCGCCCGACGCCAATGTGCTGGTGGGCGCCGTCGTGGGC
GGGCCCGACGCGCGCGACGGATTCGTCGACGACCGCGACAGCTACGGCCAGACCGAGCCC
GCCACCTACATCAACGCGCCGCTCGTCGGCGTGCTCGCTTACTTCGCCGGCACCACCAAG
TATTGA