Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035031_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:6:2448423:2453347:-1 gene:Zm00001d035031 gene_biotype:protein_coding transcript_biotype:protein_coding description:loricrin-related
Sequence

ATGTTACAGATTGGTAGCCAAGAACAAAGAGAAAAACACACAACAGTAATGGGTCACGAC
CATATGTCTCGTATAAAGATGCATATGGCAGAAGGTTCTTTTGGTGACAGGATCCGGTGC
CAGCAACCTGGGTGCAATGAGGTTGTCGATAGAAGGGTAGTGTACTGCAAAATTCACAGT
GGAGAGTTGTCATGCCAACAGTTCAGTTACCTCCAGAGCGGACTGGAGAGCTCAGGTTTA
TCTGTGCGCCCTGTTAACGACAGCCAATTTAAGGGATCTGTTTCCATTGCAGCAGTGCCA
TGCACTGAGCAAGAGTTACATGTCAAGCATGAAGGTGGTGATCGAGGTAAACTAAAGGAT
AGTTCTGGGTACACTTTGGGTCAGGCTGCACAATTTATCTTCTCTGGGGCAAGCATGCTT
TGCAAGAACGATAACTGCAGCAAGCAAGCACACGAGAACTCAATCCACTGTAAGTTGCAT
AGCGGCGGCGTTAACAAGGGCTGCATGGCACGGGGCTGTACAAGAGGTGCGCATGGAGGC
ACGCCTTTGTGCATTGGGCACGGAGGTGGGAGGCGGTGTGTGGTCCCTGGATGCCCAAAT
GCAGCATGTGGCCAAGGCCGTAGCGACCGCTGCGTGAGGCACGGTGGCGGCAAGAGATGT
AAATTCGAAGGGTGCGCGAAGGGCGCGCAAGGGAACACCGATCACTGCATAAGGCACGGT
GGGGGAAGGCGGTGCAGGTTCCAAGGATGTACAAAGAGTGCGCAGGGACGCACAGATTTC
TGCATCAAGCATGGTGGGGGCAGCCGGTGCAGGTTCCAAGGGTGTGGCGCGAGCGCAAAA
TGGGGAACGGATTTGTGCTCTGTGCACAGGAAGAGCCTGTTGGGCGGTGACAATGCCATC
CCTGAAGCTTTGGCCGCCCCTTCAGAAAAACGACGCCGGGCCAAGACGCCCCAAAGGGAA
GCGAAGCCGTCCGAGGTCTTCCAAGAGAATGTCACAACAGCAGCTACTGCTGGTAACAGC
ACACAGCACACGGGCTTCCTTCTCGTAGCTGCCCCTGTTGCTAACCGTGACATACTGACC
AATGGTATGGCAGTGACGGGGCAAGCTGCAATAGCCCCCCAACGGATAGTGGCACCGATG
TTCATGAGATCACCAACGCCATCTGGATCAGTGGCTGCCTCGGCACAGAGGTGGGAGGCG
GGAGCAAGCAGGGGTATGCTGGGTCTGTAG

Peptide Sequence

PEP ID

Zm00001d035031_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:6:2448423:2453347:-1 gene:Zm00001d035031 transcript:Zm00001d035031_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:loricrin-related
Sequence

MLQIGSQEQREKHTTVMGHDHMSRIKMHMAEGSFGDRIRCQQPGCNEVVDRRVVYCKIHS
GELSCQQFSYLQSGLESSGLSVRPVNDSQFKGSVSIAAVPCTEQELHVKHEGGDRGKLKD
SSGYTLGQAAQFIFSGASMLCKNDNCSKQAHENSIHCKLHSGGVNKGCMARGCTRGAHGG
TPLCIGHGGGRRCVVPGCPNAACGQGRSDRCVRHGGGKRCKFEGCAKGAQGNTDHCIRHG
GGRRCRFQGCTKSAQGRTDFCIKHGGGSRCRFQGCGASAKWGTDLCSVHRKSLLGGDNAI
PEALAAPSEKRRRAKTPQREAKPSEVFQENVTTAATAGNSTQHTGFLLVAAPVANRDILT
NGMAVTGQAAIAPQRIVAPMFMRSPTPSGSVAASAQRWEAGASRGMLGL

Transcript Sequence

Transcript ID

Zm00001d035031_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:2448423:2453347:-1 gene:Zm00001d035031 gene_biotype:protein_coding transcript_biotype:protein_coding description:loricrin-related
Sequence

ATCGTTGGAAGTTGACTGGTGGACGAACTCCGCGCCGCCGCCGTCCTGGATGACGCCGCA
CGCACGAGGTGCAAGTGCAAACGACCGCGTCCGAGTCCGGATCCGCCACCACCGCGCCCT
CGCCGCACTACAGGCACGTGGAGCCCATCGGCGGTGAGCCGGAGGCTGGAGCACGCGCGG
CGGTGGCGGCAGCGGCTGCGCTTGCGGCGGAAGGAACGGGGTGGGGATTCGAATCGAAGG
AGCAGCGGCGATCTACTGTTCCCTTGTATTATGCCCGCAACTTTACTTCTCAAAGCCAAA
GTATATGTTGAAGAATGGCTTGGAGCTAACAGTACTGACACCAACTTTTGGTTATGATCA
GAAGCGACTGGAGTGCAGTAATGAATCTCTAATTGTTTGCAATATAAGAACCAGATACCT
CATTCAAATGGTTTTTCCATGTTACAGATTGGTAGCCAAGAACAAAGAGAAAAACACACA
ACAGTAATGGGTCACGACCATATGTCTCGTATAAAGATGCATATGGCAGAAGGTTCTTTT
GGTGACAGGATCCGGTGCCAGCAACCTGGGTGCAATGAGGTTGTCGATAGAAGGGTAGTG
TACTGCAAAATTCACAGTGGAGAGTTGTCATGCCAACAGTTCAGTTACCTCCAGAGCGGA
CTGGAGAGCTCAGGTTTATCTGTGCGCCCTGTTAACGACAGCCAATTTAAGGGATCTGTT
TCCATTGCAGCAGTGCCATGCACTGAGCAAGAGTTACATGTCAAGCATGAAGGTGGTGAT
CGAGGTAAACTAAAGGATAGTTCTGGGTACACTTTGGGTCAGGCTGCACAATTTATCTTC
TCTGGGGCAAGCATGCTTTGCAAGAACGATAACTGCAGCAAGCAAGCACACGAGAACTCA
ATCCACTGTAAGTTGCATAGCGGCGGCGTTAACAAGGGCTGCATGGCACGGGGCTGTACA
AGAGGTGCGCATGGAGGCACGCCTTTGTGCATTGGGCACGGAGGTGGGAGGCGGTGTGTG
GTCCCTGGATGCCCAAATGCAGCATGTGGCCAAGGCCGTAGCGACCGCTGCGTGAGGCAC
GGTGGCGGCAAGAGATGTAAATTCGAAGGGTGCGCGAAGGGCGCGCAAGGGAACACCGAT
CACTGCATAAGGCACGGTGGGGGAAGGCGGTGCAGGTTCCAAGGATGTACAAAGAGTGCG
CAGGGACGCACAGATTTCTGCATCAAGCATGGTGGGGGCAGCCGGTGCAGGTTCCAAGGG
TGTGGCGCGAGCGCAAAATGGGGAACGGATTTGTGCTCTGTGCACAGGAAGAGCCTGTTG
GGCGGTGACAATGCCATCCCTGAAGCTTTGGCCGCCCCTTCAGAAAAACGACGCCGGGCC
AAGACGCCCCAAAGGGAAGCGAAGCCGTCCGAGGTCTTCCAAGAGAATGTCACAACAGCA
GCTACTGCTGGTAACAGCACACAGCACACGGGCTTCCTTCTCGTAGCTGCCCCTGTTGCT
AACCGTGACATACTGACCAATGGTATGGCAGTGACGGGGCAAGCTGCAATAGCCCCCCAA
CGGATAGTGGCACCGATGTTCATGAGATCACCAACGCCATCTGGATCAGTGGCTGCCTCG
GCACAGAGGTGGGAGGCGGGAGCAAGCAGGGGTATGCTGGGTCTGTAGAAAGGTGGTATA
ATTTGGGAAGGCTTGGAGACACCTTGCCCAAGATAGTTCTCTGATTATTGGCTTTCAGAC
TGAGAAACCTCTGAAACTTGACAGCCTTGTGCCGTCAACGGACTCTAGTGATGTCCTGTG
CAGCTGTGCTCTCTCATTTGTATTGTAAATTGTAATGCAAATCTCTAGTTGTTCTTGTGT
ATGTTCTCTTGTCGCCTTGTAGTAGCGTGGAAACCGGTCGGGGGACCATCTGGAACTTTG
GATGATAAGCAATAATATTGTGGCATGGCCTAGCTTTGCAGGTC