Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035029_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:6:2397014:2400164:1 gene:Zm00001d035029 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein transporter%3B Putative VHS/GAT domain containing family protein isoform 1%3B Putative VHS/GAT domain containing family protein isoform 2

Sequence

ATGCTTCTGAATAATTGCGGAGAGCCTGTCCATAGGCAGGTCATTGATAATGGCCTTCTT
CCAATACTTGTGAAGATAGTGAAGAAAAAGACGGATTTACCAGTTCGAGAAAAAATATTT
CTTCTGTTAGATGCAACACAAACATCCCTTGGTGGAGCTAAAGCAAGGTTCCCTCAGTAC
TATGAGGCATACTATGAGTTGGTGTCTGCTGGTGTGCAATTTTCAAATCGGCCAAATGTT
CTTGTCACACGAGCAGAAGTGCCAGTCCCAGAAACGAGAACAGAACCAAATAATGAAAGT
TTATCGACCCGTTTGACTGAAGCTCAACAGGAAGTGCACACTCAGCCTGTTCCTGATGCA
AGTATAGTCCAGAAAGCCTCTAGTGTCATGGAAGTATTGAGGGATGTGCTTAATTCTATG
GATCCTAGGCACCCTGAGGGAGCAACGGATGAATTTGTGTTGGATCTTGTCGAGCAATGT
ACGTTTCAGAAGCAACGAATAATGCACCTTGTTATGACATCAAGGGATGAAACACTGGTA
TCACAAGCTATAGAGCTAAATGAAGAGCTACATAAGGTTCTCGTCCGGCATGACGCGTTG
CTTTCAGTTCATCCGACAACAGCAGTAGCTTCTAATATAAAGGAAGAAGAGGAGGAAGAG
GATGCTGAAAGTCTCTATCGGAGACTGCGGAAGGGGAAGGCGCTGTCGCAGGACTACACA
GATGACCTGGTGCCGTCGTTCCGATCCATGCCCGAGGACAAGCTGCGGCGGCCGCTGACC
ATCCAATCGCCTCACCCCGACAAGAGACTGGGTGCGCTGAACATCCGCTCGCCGGACCGC
GAGGAACCGAGACTTGATCCTGCTCCGCTGATCCCGCCGCCGCCCGCAAAGCACGCCGAG
AGGGAGAGGTTCTTCCGAGAGAAGAGCATCGACGGTGTGGCCAGCCTTCCGGGCCACATG
AGGGGCCTGTCGCAGCACAGCCGGGACGGCAGCAGCTCGTGTAGCGGCAGCACTGATTAC
GGCGACTGA

Peptide Sequence

PEP ID

Zm00001d035029_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:6:2397014:2400164:1 gene:Zm00001d035029 transcript:Zm00001d035029_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein transporter%3B Putative VHS/GAT domain containing family protein isoform 1%3B Putative VHS/GAT domain containing family protein isoform 2

Sequence

MLLNNCGEPVHRQVIDNGLLPILVKIVKKKTDLPVREKIFLLLDATQTSLGGAKARFPQY
YEAYYELVSAGVQFSNRPNVLVTRAEVPVPETRTEPNNESLSTRLTEAQQEVHTQPVPDA
SIVQKASSVMEVLRDVLNSMDPRHPEGATDEFVLDLVEQCTFQKQRIMHLVMTSRDETLV
SQAIELNEELHKVLVRHDALLSVHPTTAVASNIKEEEEEEDAESLYRRLRKGKALSQDYT
DDLVPSFRSMPEDKLRRPLTIQSPHPDKRLGALNIRSPDREEPRLDPAPLIPPPPAKHAE
RERFFREKSIDGVASLPGHMRGLSQHSRDGSSSCSGSTDYGD

Transcript Sequence

Transcript ID

Zm00001d035029_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:2397014:2400164:1 gene:Zm00001d035029 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein transporter%3B Putative VHS/GAT domain containing family protein isoform 1%3B Putative VHS/GAT domain containing family protein isoform 2

Sequence

CACTTCTATTTGATTCAGCTATTGGAGATGCTTCTGAATAATTGCGGAGAGCCTGTCCAT
AGGCAGGTCATTGATAATGGCCTTCTTCCAATACTTGTGAAGATAGTGAAGAAAAAGACG
GATTTACCAGTTCGAGAAAAAATATTTCTTCTGTTAGATGCAACACAAACATCCCTTGGT
GGAGCTAAAGCAAGGTTCCCTCAGTACTATGAGGCATACTATGAGTTGGTGTCTGCTGGT
GTGCAATTTTCAAATCGGCCAAATGTTCTTGTCACACGAGCAGAAGTGCCAGTCCCAGAA
ACGAGAACAGAACCAAATAATGAAAGTTTATCGACCCGTTTGACTGAAGCTCAACAGGAA
GTGCACACTCAGCCTGTTCCTGATGCAAGTATAGTCCAGAAAGCCTCTAGTGTCATGGAA
GTATTGAGGGATGTGCTTAATTCTATGGATCCTAGGCACCCTGAGGGAGCAACGGATGAA
TTTGTGTTGGATCTTGTCGAGCAATGTACGTTTCAGAAGCAACGAATAATGCACCTTGTT
ATGACATCAAGGGATGAAACACTGGTATCACAAGCTATAGAGCTAAATGAAGAGCTACAT
AAGGTTCTCGTCCGGCATGACGCGTTGCTTTCAGTTCATCCGACAACAGCAGTAGCTTCT
AATATAAAGGAAGAAGAGGAGGAAGAGGATGCTGAAAGTCTCTATCGGAGACTGCGGAAG
GGGAAGGCGCTGTCGCAGGACTACACAGATGACCTGGTGCCGTCGTTCCGATCCATGCCC
GAGGACAAGCTGCGGCGGCCGCTGACCATCCAATCGCCTCACCCCGACAAGAGACTGGGT
GCGCTGAACATCCGCTCGCCGGACCGCGAGGAACCGAGACTTGATCCTGCTCCGCTGATC
CCGCCGCCGCCCGCAAAGCACGCCGAGAGGGAGAGGTTCTTCCGAGAGAAGAGCATCGAC
GGTGTGGCCAGCCTTCCGGGCCACATGAGGGGCCTGTCGCAGCACAGCCGGGACGGCAGC
AGCTCGTGTAGCGGCAGCACTGATTACGGCGACTGAAAGGGGAGGGGTGAGCAGCAGCAG
CAGTACATATAGGGTTCCCCTTCTTGGGGCTGGTCTCACACTTGGTCAGGCCAGGCAGGC
GATACATTGGTGTTGTGCCGGAGTTTGGATCGTCGGCGTCTCCTTCATGCTGACCTGTGT
ACACTTGTCTTGGTAGCATTTTGTTCATTTTTCATATTTTCCCTTTGGCTGATATGACAT
TACTGGGAGGCCGTTGTGTTGGTGTGGCGTTGTGGGTTCTTTCCCTTTGAGGTCTCTATA
GATGATTGTGATCTACTGCATGGGGGTATGCTTGGGTCTGAAGCATTGCTGTGACTTTAC
CCTTTTGGCTTTCTGCTCCTGTGTGTGGTGTATCACTTGGAGGTCTGTCAGAGGCGTGCG
TGGGAAAAGCTACTGTGCAACGCATGCCAGAAACCCACTTTGAGCTGTCTATAGATCGAA
A