Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d035004_T039
CDS Infomation	cds chromosome:B73_RefGen_v4:6:1573668:1578484:1 gene:Zm00001d035004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family
Sequence	ATGACATCTAAAACATTAATGTTCTTGGAAGGCTTTCCATGTCCACTCGGTTGCACGATC TTGCTAAAAGGAGCAAACAGTGAAGAATTGAAGAAGGTCAAACAAGTAATGCATTTTACA GTCTTTGCAGCATATCACTTGATCCTTGAAACATCTTTCTTTGAAGATCAAAGGGTTTTT CTGAATGATAGTACTACAAAAGAAACTTCTGCTACTGCTACAGAAGGGACTTATGGTGTT GCTGCTCTTAGTGGGCCTATTCCTAACTTTCCTTCACATGGAAATGTGGATAAATTCAGT GCAGTATCCAGCAGCTCTTCAAATGACCTTGAACAAGGTGCAAATGTCAGGTCCAATAAT GCCGAGAGGTTAACATTACCAGTCCAAGGGCCACTAAGGAAATTGTTCGCTGACATGTTA TGTCACCAGAATATTTACTTACCCGTTACATCATTGCAAGAGGCAAATGATAACAGGAAG GAAGTCAGGGTTGAATCCAGTCAAGAAACTGTTAGTAATGGTTTCCATAGGCCAAAGACA GGAGAGTCTGTGATTTCCATTGAAAATGGGGAGTCCATAAATGATGCCCAGACACAAGAA ATTACTCAAGCAATAATGCCAACTGGTTCTTCTGTAAGTGATAAGGATGCAGAATCACCT GTTATGGGAGACAATGGGGCACATAGTACTACAAGTATCATTATCAAAGAGAAGCATGCT GACGGCGATCAAGCTGATGATGCACTTGATTCTCACAGCATACTGATTTTGATGTCTAGC CAGTGCACAGAAAAGCAGGTTATCTGTGAACAAAGCCATTTAACCCGTATAAAATACTAT GGGAGTTTTGATGTGTCCTTGGGGCGATATTTGCAAGACATTCTACAGAATCAGAAACTG AGTTGCTCTTCATGTGGAGAGCCTCCAGAGTCGCACATGTACTCCTACACGCACCGCAAT GGAAATTTGACCGTTCTAGTGAAACGTCTGGTGCCCAAACACTATTTGCCTGGCGAATCT GAAGGAAAAATATGGATGTGGACTAGATGCTCAAGATGTGATCATGAACATGGGGTATCC AAACCAACTCCAAGAGTACTAATATCAGCTGAAGCACGCAACCTCTCGTTTGGGAAATTT CTGGAGCTCAGTTTTTCAAGCCACTCTGCAGCAAGAAGGTTATCTATATGTGGACATCTG GTCAACAGGGATTGCTTGCGTTTTTTTGGGCTGGGCTCTAAAGTTGCTATGTTCCGGTAC TCACCTGTTGAAATTTACACTACCTGCAAACCACAACCTACTCTCCAATTCGTCAACCCC ATCAGACAGGATTGGTTTGAAGGACAAAGGAGAAATGTTCATGCTAAAAGTATGGCACTT TTCTCTGGGGTTGCAAGATTTCTACAGAACTTGAAGAATGAACATCCTGATGCAATAACA TTAGCAGTCAATTGTGGCCTCACACTCCCTGTTAAGGACTTCACTGAACTAGAAGAGTTG TTGATAAAAGAAAAGGCCCAGTTTGAGAGTTCTTTGGACAAGGCCACTGACGAAAATGGG AAACCATTCGGGTCTGTGCATGGAGTATTGAATATAAATTGGTACTATCAGGATCTTCTA CTTAAGCTTTACATTTGGGACCGCCGTCTATATCAACTATTCTATTGCAAATCTGTCCAA CTAGAAAGTTGTTCTAATTACAAGAATCCTGCTGGTACTGTTGATGGGAACTGTGATGAT AACTTTGGTGTTGATAAGAAAATCGGTGAAATTACATCTGATGAAATTACGGCAGCTTTG GGGGTATCCAGTACCATGGAGTCTGCAAGTAACAAACTTGATCATCAATCAGGTGACACC ACAGCACTCTTACTTCATAAAAGCCAGGAAGCTGGGCACTCGGAATTTCCTTGCAATGGA GGTAGTAAAGCTGAAGAATCTTCTATTGCTCATGGTCAAATAAAGGTAGATGGCACAACA GAAACCACAAATGATCCTTGTTTTGAAATATCCAATGATATGGAGGTCCAGGCCAATCTT ACAGTAGCAGATCCAATACCCATGGAACAGGAGCGTTGTAGCACTCCCCAACAATTCAAA TATCCTTATTGGGATGACAGGGAGAGGTGGATTTGGAATTCATTTTCTGAGTCTCAAATG GCTTACAGGGATGACATTGAAATTGGATATTTGGGCAAATTTGAACTCATTAACAATTAT TTGCCACATTATCTTTCTCCCTTGTTTGAACAACATGATGATTCATACTCTCCGCAGTTC GCGGTAGGTCCAGGTAGTAATATTTTGTGCATAATGGAAGATGAGATATCCAGCATAATA GCTCGTGCTCTTGCCATATCTGATGAACGCCACCATTTGATAGATTTAAAATTCGAGAAC GGAATGGATTATTCCAAAGGAGAGTATGCTAAAGCAATAGAGAAATCTTTTAGTTTTCTG TCTGAAAGTTCTTTCAGCTCATCACCATGGTCATCTACAGATTCTGAAGCAAGCTTATCG TCTCTGTCTTCATTTTCATCTGATGACTTTTCTGGTTATGATAGCTCATCTTTATTGTCC CCAATGCATCCAGAAATGACTGTGAATGGGAAAGTAACTCTCAAAGACAAATATTCAGTT ACTGTTGTATATGACAATCAATTCTTTGCACTCCGAAAAAAGTGTTGCCCATCCGAGCTT GCATATATTACTTCTTTAAGCCGCTGCAAGAAGTGGAATGCTCAAGGTGGAAAGAGCAAG GCCTATTTTGCAAAGACGACGGATGACAGGTTCATCATTAAGCAAATCAAGAAAACAGAG TTTGAGTCATTTATTAAATTTGCACCTGATTACTTTAAGCATGTTTACCATTCTCTGGAC ACTGGAAGCCAAACTTGTCTCGCCAAAATATTAGGAATCTATCAGGTTAAGCAAATTAAG CATGGTAAAGAGGTAAAGATTGACTTGATGGTGATGGAAAATCTTCTCTTTGGCCACAAT ATTTCACGAATTTATGACCTCAAAGGTGCTACATTTTCGCGACGCATCACTGACTCAAAT GATCATGATACTGTTTACCTGGATCAAAATTATGTTGAGGACATGGGGTTTTCTCCAATC TATATTGGTGGAAGAACAAAGCATCTTTTGCAGCGTGCAATCTGGAATGACACGGCTTTT CTCACTTCGGTGAATGTCATGGACTATTCTCTACTTGTGGGAGTGGACAAAGAGAAGCAT GAACTTGTGTTTGGCATCATTGATTATCTGAGGCAATATACTTGGGACAAACAACTGGAG ACATGGGTGAAGACTTCTCTGGTAGTACCCAAAAATGTTTTACCAACTGTAATTTCCCCC AAGGAATACAAAAAAAGGTTTAGGAAGTTCATGGCGAAGTACTTTCTGTCAGTTCCAGAC ACATGGAGTCCTGATAATCCGTCTAAGCCATGCAAATCCCTTGGTCAGAGCAATCGCAAG TTGGCGGAAGTCCAGAATGGTGATAACCTGTCAGAGCACCCAAATGAAGTTGAGGGGTGT GCCTAA

Peptide Sequence

PEP ID	Zm00001d035004_P039
PEP Infomation	pep chromosome:B73_RefGen_v4:6:1573668:1578484:1 gene:Zm00001d035004 transcript:Zm00001d035004_T039 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family
Sequence	MTSKTLMFLEGFPCPLGCTILLKGANSEELKKVKQVMHFTVFAAYHLILETSFFEDQRVF LNDSTTKETSATATEGTYGVAALSGPIPNFPSHGNVDKFSAVSSSSSNDLEQGANVRSNN AERLTLPVQGPLRKLFADMLCHQNIYLPVTSLQEANDNRKEVRVESSQETVSNGFHRPKT GESVISIENGESINDAQTQEITQAIMPTGSSVSDKDAESPVMGDNGAHSTTSIIIKEKHA DGDQADDALDSHSILILMSSQCTEKQVICEQSHLTRIKYYGSFDVSLGRYLQDILQNQKL SCSSCGEPPESHMYSYTHRNGNLTVLVKRLVPKHYLPGESEGKIWMWTRCSRCDHEHGVS KPTPRVLISAEARNLSFGKFLELSFSSHSAARRLSICGHLVNRDCLRFFGLGSKVAMFRY SPVEIYTTCKPQPTLQFVNPIRQDWFEGQRRNVHAKSMALFSGVARFLQNLKNEHPDAIT LAVNCGLTLPVKDFTELEELLIKEKAQFESSLDKATDENGKPFGSVHGVLNINWYYQDLL LKLYIWDRRLYQLFYCKSVQLESCSNYKNPAGTVDGNCDDNFGVDKKIGEITSDEITAAL GVSSTMESASNKLDHQSGDTTALLLHKSQEAGHSEFPCNGGSKAEESSIAHGQIKVDGTT ETTNDPCFEISNDMEVQANLTVADPIPMEQERCSTPQQFKYPYWDDRERWIWNSFSESQM AYRDDIEIGYLGKFELINNYLPHYLSPLFEQHDDSYSPQFAVGPGSNILCIMEDEISSII ARALAISDERHHLIDLKFENGMDYSKGEYAKAIEKSFSFLSESSFSSSPWSSTDSEASLS SLSSFSSDDFSGYDSSSLLSPMHPEMTVNGKVTLKDKYSVTVVYDNQFFALRKKCCPSEL AYITSLSRCKKWNAQGGKSKAYFAKTTDDRFIIKQIKKTEFESFIKFAPDYFKHVYHSLD TGSQTCLAKILGIYQVKQIKHGKEVKIDLMVMENLLFGHNISRIYDLKGATFSRRITDSN DHDTVYLDQNYVEDMGFSPIYIGGRTKHLLQRAIWNDTAFLTSVNVMDYSLLVGVDKEKH ELVFGIIDYLRQYTWDKQLETWVKTSLVVPKNVLPTVISPKEYKKRFRKFMAKYFLSVPD TWSPDNPSKPCKSLGQSNRKLAEVQNGDNLSEHPNEVEGCA

Transcript Sequence

Transcript ID	Zm00001d035004_T039
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:1573668:1578484:1 gene:Zm00001d035004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family
Sequence	TCGAGAAAACTGTTTCACGAAACATTCAAGAACTTCTTCTGAAAGAAGGTGTCACTCTAA TTTTTGATTTGAAACTCAACCGGCTACAAAGAATTGCGCGCTGTACTGGCTCTCCCATAA TATCGTTTTCAGAAGTTTTGGATAAACCGAAGCTGAAGCAATGTGACTACTTTCATATCG GAAAATTTACCGAGGAGCACAACAATGCCAGTGAGGGTGGAAAGATGACATCTAAAACAT TAATGTTCTTGGAAGGCTTTCCATGTCCACTCGGTTGCACGATCTTGCTAAAAGGAGCAA ACAGTGAAGAATTGAAGAAGGTCAAACAAGTAATGCATTTTACAGTCTTTGCAGCATATC ACTTGATCCTTGAAACATCTTTCTTTGAAGATCAAAGGGTTTTTCTGAATGATAGTACTA CAAAAGAAACTTCTGCTACTGCTACAGAAGGGACTTATGGTGTTGCTGCTCTTAGTGGGC CTATTCCTAACTTTCCTTCACATGGAAATGTGGATAAATTCAGTGCAGTATCCAGCAGCT CTTCAAATGACCTTGAACAAGGTGCAAATGTCAGGTCCAATAATGCCGAGAGGTTAACAT TACCAGTCCAAGGGCCACTAAGGAAATTGTTCGCTGACATGTTATGTCACCAGAATATTT ACTTACCCGTTACATCATTGCAAGAGGCAAATGATAACAGGAAGGAAGTCAGGGTTGAAT CCAGTCAAGAAACTGTTAGTAATGGTTTCCATAGGCCAAAGACAGGAGAGTCTGTGATTT CCATTGAAAATGGGGAGTCCATAAATGATGCCCAGACACAAGAAATTACTCAAGCAATAA TGCCAACTGGTTCTTCTGTAAGTGATAAGGATGCAGAATCACCTGTTATGGGAGACAATG GGGCACATAGTACTACAAGTATCATTATCAAAGAGAAGCATGCTGACGGCGATCAAGCTG ATGATGCACTTGATTCTCACAGCATACTGATTTTGATGTCTAGCCAGTGCACAGAAAAGC AGGTTATCTGTGAACAAAGCCATTTAACCCGTATAAAATACTATGGGAGTTTTGATGTGT CCTTGGGGCGATATTTGCAAGACATTCTACAGAATCAGAAACTGAGTTGCTCTTCATGTG GAGAGCCTCCAGAGTCGCACATGTACTCCTACACGCACCGCAATGGAAATTTGACCGTTC TAGTGAAACGTCTGGTGCCCAAACACTATTTGCCTGGCGAATCTGAAGGAAAAATATGGA TGTGGACTAGATGCTCAAGATGTGATCATGAACATGGGGTATCCAAACCAACTCCAAGAG TACTAATATCAGCTGAAGCACGCAACCTCTCGTTTGGGAAATTTCTGGAGCTCAGTTTTT CAAGCCACTCTGCAGCAAGAAGGTTATCTATATGTGGACATCTGGTCAACAGGGATTGCT TGCGTTTTTTTGGGCTGGGCTCTAAAGTTGCTATGTTCCGGTACTCACCTGTTGAAATTT ACACTACCTGCAAACCACAACCTACTCTCCAATTCGTCAACCCCATCAGACAGGATTGGT TTGAAGGACAAAGGAGAAATGTTCATGCTAAAAGTATGGCACTTTTCTCTGGGGTTGCAA GATTTCTACAGAACTTGAAGAATGAACATCCTGATGCAATAACATTAGCAGTCAATTGTG GCCTCACACTCCCTGTTAAGGACTTCACTGAACTAGAAGAGTTGTTGATAAAAGAAAAGG CCCAGTTTGAGAGTTCTTTGGACAAGGCCACTGACGAAAATGGGAAACCATTCGGGTCTG TGCATGGAGTATTGAATATAAATTGGTACTATCAGGATCTTCTACTTAAGCTTTACATTT GGGACCGCCGTCTATATCAACTATTCTATTGCAAATCTGTCCAACTAGAAAGTTGTTCTA ATTACAAGAATCCTGCTGGTACTGTTGATGGGAACTGTGATGATAACTTTGGTGTTGATA AGAAAATCGGTGAAATTACATCTGATGAAATTACGGCAGCTTTGGGGGTATCCAGTACCA TGGAGTCTGCAAGTAACAAACTTGATCATCAATCAGGTGACACCACAGCACTCTTACTTC ATAAAAGCCAGGAAGCTGGGCACTCGGAATTTCCTTGCAATGGAGGTAGTAAAGCTGAAG AATCTTCTATTGCTCATGGTCAAATAAAGGTAGATGGCACAACAGAAACCACAAATGATC CTTGTTTTGAAATATCCAATGATATGGAGGTCCAGGCCAATCTTACAGTAGCAGATCCAA TACCCATGGAACAGGAGCGTTGTAGCACTCCCCAACAATTCAAATATCCTTATTGGGATG ACAGGGAGAGGTGGATTTGGAATTCATTTTCTGAGTCTCAAATGGCTTACAGGGATGACA TTGAAATTGGATATTTGGGCAAATTTGAACTCATTAACAATTATTTGCCACATTATCTTT CTCCCTTGTTTGAACAACATGATGATTCATACTCTCCGCAGTTCGCGGTAGGTCCAGGTA GTAATATTTTGTGCATAATGGAAGATGAGATATCCAGCATAATAGCTCGTGCTCTTGCCA TATCTGATGAACGCCACCATTTGATAGATTTAAAATTCGAGAACGGAATGGATTATTCCA AAGGAGAGTATGCTAAAGCAATAGAGAAATCTTTTAGTTTTCTGTCTGAAAGTTCTTTCA GCTCATCACCATGGTCATCTACAGATTCTGAAGCAAGCTTATCGTCTCTGTCTTCATTTT CATCTGATGACTTTTCTGGTTATGATAGCTCATCTTTATTGTCCCCAATGCATCCAGAAA TGACTGTGAATGGGAAAGTAACTCTCAAAGACAAATATTCAGTTACTGTTGTATATGACA ATCAATTCTTTGCACTCCGAAAAAAGTGTTGCCCATCCGAGCTTGCATATATTACTTCTT TAAGCCGCTGCAAGAAGTGGAATGCTCAAGGTGGAAAGAGCAAGGCCTATTTTGCAAAGA CGACGGATGACAGGTTCATCATTAAGCAAATCAAGAAAACAGAGTTTGAGTCATTTATTA AATTTGCACCTGATTACTTTAAGCATGTTTACCATTCTCTGGACACTGGAAGCCAAACTT GTCTCGCCAAAATATTAGGAATCTATCAGGTTAAGCAAATTAAGCATGGTAAAGAGGTAA AGATTGACTTGATGGTGATGGAAAATCTTCTCTTTGGCCACAATATTTCACGAATTTATG ACCTCAAAGGTGCTACATTTTCGCGACGCATCACTGACTCAAATGATCATGATACTGTTT ACCTGGATCAAAATTATGTTGAGGACATGGGGTTTTCTCCAATCTATATTGGTGGAAGAA CAAAGCATCTTTTGCAGCGTGCAATCTGGAATGACACGGCTTTTCTCACTTCGGTGAATG TCATGGACTATTCTCTACTTGTGGGAGTGGACAAAGAGAAGCATGAACTTGTGTTTGGCA TCATTGATTATCTGAGGCAATATACTTGGGACAAACAACTGGAGACATGGGTGAAGACTT CTCTGGTAGTACCCAAAAATGTTTTACCAACTGTAATTTCCCCCAAGGAATACAAAAAAA GGTTTAGGAAGTTCATGGCGAAGTACTTTCTGTCAGTTCCAGACACATGGAGTCCTGATA ATCCGTCTAAGCCATGCAAATCCCTTGGTCAGAGCAATCGCAAGTTGGCGGAAGTCCAGA ATGGTGATAACCTGTCAGAGCACCCAAATGAAGTTGAGGGGTGTGCCTAATCATGTGCAG GATTTCCTGGCAGTTTTGTTGAATCCTATCATGTTGTTGTTTGGCTATATTTCACTTTGT AAAATGGTGTACATAGAAGGACCTCACTGTTGATTTATCCAAAAGTTTGCGGTTTTTAGG CAAATTGTTGGGCAAGTGAGGTCCACAGGACGTGTACCTATGTTCATTGTTAATTTCACA ATTATTATAGTGAAATTAAGAATTCATATGATCATTTTTTTGG