Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034990_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:1282754:1285886:-1 gene:Zm00001d034990 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	ATGGCCGCGCGCGCCAAGGCCGCCGCCGTCGACGACCACGACCCCATGCCGCCACCGCTG CCGCTCCCATGGCCGCGCCCAGCGCCGCTCCTCGTCATGCTGTCCCTGCTCGCCACGGCC TCCTACCTGGCCCTCACGCGCTTTCCCGCCGCGCTCCTCCCGATCGCCCCTCGCTCTCGC CCCCACGACGCGCCCGCGCACGCGCCCGGGGACAGCTGCGCGGGGTTCTACGCGGGCGCG GGGCCGGCGCGCGAGGTGTGGGCGTCCGTCGAGGAGTTCGGGGCCGTGGGCGACGGGGCC ACGCTCAACACCGCGGCGTTCCGGCGCGCCGTCGCGGAGCTGGGCGCGAGGGCCGTCGGT GGGGGAGGGGCCAGGCTCGACGTGCCCCCCGGGAGGTGGCTCACGGGCAGCTTCAACCTC ACCAGCCGCTTCACCCTCTTCCTGCACCGCGGCGCGGTCATCCTCGGCTCCCAGGATCCA GAAGAGTGGCCTCTCATTACCCCTTTGCCGTCTTACGGGCGCGGGAGAGAGCGGTTAGGA CCACGCCACATCAGCCTCATTCACGGAGAGGGCTTAAACGATGTTGTTATTACCGGTAGC AACGGGACCATAGATGGGCAAGGTCATATGTGGTGGGAGCTATGGCGGAACCGAACCTTG AACCACACGAGAGGCCATCTCATCGAGCTTGTGAACTCAACCAACGTCCTGATATCCAGT GTCACGCTGAGCAACTCCCCTTTCTGGACAGTACACCCGGTCTACTGCAGCAACGTGGTG ATGAAGGATTTGACCATACTGGCTCCCCTGGATGCTCCAAACACAGATGGCATTGATCCA GACTCGAGCTCTGAAGTTTGCATCGAAGACTGCTACATCGAAAGCGGAGACGACCTCGTG GCCGTCAAGAGTGGCTGGGACCAGTACGGGATCTCATTTGGCAAGCCGAGCACGAACATC GTCATCCAGAGGGTTTCGGGCACGACTCCGACGTGCTCGGGCGTAGGCTTCGGCAGCGAG ATGTCAGGAGGCATATCTAACGTGCTCGTCCGTGACCTCCACGTGTGGAATTCGGCGCAG GCCGTGAGGCTCAAGACCGACGTAGGGAGGGGTGGCTACATCACCAACATCACCATAGCC AGTGTGGCCATGGAGAAGGTCAAGGTGCCGATAAGGTTCAGCCGAGGCGCAGATGACCAT CCTGACGACAGGTATGACCCGGCCGCGCTGCCGAGGATCAGCAACGTGCTGGTCAGCGAC GTCGTCGGTGTACACCTGCAGCGAGCACCGATGCTGGAGGCAGTGCCTGGCGCAGTTTAT GAGGGGATCTGCTTCAGGAACTTCAGCTTCAGAGGGATAAGGCGGCAGCAGGACAGCAGG TGGCATTGCGAGTCTGTGTATGGAGAGGCGCATGACGTTTTCCCTGCACCGTGTGAAGAG TTCAGGAGAGATGGATCCTCCTCCTGGTGTGGACTTCTTTGA

Peptide Sequence

PEP ID	Zm00001d034990_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:1282754:1285886:-1 gene:Zm00001d034990 transcript:Zm00001d034990_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	MAARAKAAAVDDHDPMPPPLPLPWPRPAPLLVMLSLLATASYLALTRFPAALLPIAPRSR PHDAPAHAPGDSCAGFYAGAGPAREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVG GGGARLDVPPGRWLTGSFNLTSRFTLFLHRGAVILGSQDPEEWPLITPLPSYGRGRERLG PRHISLIHGEGLNDVVITGSNGTIDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISS VTLSNSPFWTVHPVYCSNVVMKDLTILAPLDAPNTDGIDPDSSSEVCIEDCYIESGDDLV AVKSGWDQYGISFGKPSTNIVIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQ AVRLKTDVGRGGYITNITIASVAMEKVKVPIRFSRGADDHPDDRYDPAALPRISNVLVSD VVGVHLQRAPMLEAVPGAVYEGICFRNFSFRGIRRQQDSRWHCESVYGEAHDVFPAPCEE FRRDGSSSWCGLL

Transcript Sequence

Transcript ID	Zm00001d034990_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:1282754:1285886:-1 gene:Zm00001d034990 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	ATCGGCCGCGTCCGGCGTCCCGTCCAAAAAGGGAAAGCGATGCGCGTGGCGTGGCGGCAC TTCCTCCTCCGCCTGCCTCGCCCGCCATGGCCGCGCGCGCCAAGGCCGCCGCCGTCGACG ACCACGACCCCATGCCGCCACCGCTGCCGCTCCCATGGCCGCGCCCAGCGCCGCTCCTCG TCATGCTGTCCCTGCTCGCCACGGCCTCCTACCTGGCCCTCACGCGCTTTCCCGCCGCGC TCCTCCCGATCGCCCCTCGCTCTCGCCCCCACGACGCGCCCGCGCACGCGCCCGGGGACA GCTGCGCGGGGTTCTACGCGGGCGCGGGGCCGGCGCGCGAGGTGTGGGCGTCCGTCGAGG AGTTCGGGGCCGTGGGCGACGGGGCCACGCTCAACACCGCGGCGTTCCGGCGCGCCGTCG CGGAGCTGGGCGCGAGGGCCGTCGGTGGGGGAGGGGCCAGGCTCGACGTGCCCCCCGGGA GGTGGCTCACGGGCAGCTTCAACCTCACCAGCCGCTTCACCCTCTTCCTGCACCGCGGCG CGGTCATCCTCGGCTCCCAGGATCCAGAAGAGTGGCCTCTCATTACCCCTTTGCCGTCTT ACGGGCGCGGGAGAGAGCGGTTAGGACCACGCCACATCAGCCTCATTCACGGAGAGGGCT TAAACGATGTTGTTATTACCGGTAGCAACGGGACCATAGATGGGCAAGGTCATATGTGGT GGGAGCTATGGCGGAACCGAACCTTGAACCACACGAGAGGCCATCTCATCGAGCTTGTGA ACTCAACCAACGTCCTGATATCCAGTGTCACGCTGAGCAACTCCCCTTTCTGGACAGTAC ACCCGGTCTACTGCAGCAACGTGGTGATGAAGGATTTGACCATACTGGCTCCCCTGGATG CTCCAAACACAGATGGCATTGATCCAGACTCGAGCTCTGAAGTTTGCATCGAAGACTGCT ACATCGAAAGCGGAGACGACCTCGTGGCCGTCAAGAGTGGCTGGGACCAGTACGGGATCT CATTTGGCAAGCCGAGCACGAACATCGTCATCCAGAGGGTTTCGGGCACGACTCCGACGT GCTCGGGCGTAGGCTTCGGCAGCGAGATGTCAGGAGGCATATCTAACGTGCTCGTCCGTG ACCTCCACGTGTGGAATTCGGCGCAGGCCGTGAGGCTCAAGACCGACGTAGGGAGGGGTG GCTACATCACCAACATCACCATAGCCAGTGTGGCCATGGAGAAGGTCAAGGTGCCGATAA GGTTCAGCCGAGGCGCAGATGACCATCCTGACGACAGGTATGACCCGGCCGCGCTGCCGA GGATCAGCAACGTGCTGGTCAGCGACGTCGTCGGTGTACACCTGCAGCGAGCACCGATGC TGGAGGCAGTGCCTGGCGCAGTTTATGAGGGGATCTGCTTCAGGAACTTCAGCTTCAGAG GGATAAGGCGGCAGCAGGACAGCAGGTGGCATTGCGAGTCTGTGTATGGAGAGGCGCATG ACGTTTTCCCTGCACCGTGTGAAGAGTTCAGGAGAGATGGATCCTCCTCCTGGTGTGGAC TTCTTTGACCAACTACTCTATCTAGTAGTAGTACATACTACAGCGCCCACAAGTTTTGGG AGTGGATGATATAGGTTTTTTAGATTATACAGACAAACTCAATTTTTTAAACTTTAA