Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034983_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:786226:787774:1 gene:Zm00001d034983 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein from transposon TNT 1-94
Sequence	ATGGCAGCAGCAGCAGCAGGGTGGGCCGACCTCCCACTCGACATGCTGGACGAGGTCATC GCGCGCCTCCCGATCCCCGGCGACCGTGCCCGCTTGGCCGCCGTGTGCCGCGCATGGCGC TCCGCCGCGCGCGAGGTCGTGAGCCACCTCCCGTGGATCGTGCTCCCATACGGCACCGCC TGCACCGCCGGCCACGGCGCGGCCTGTTCCGCCTTCCGGATCCCCGGGTTCCCCGACGAC ACCACCTGCCTCGGCGCCGCCTACGACTGCTGGCTCGCCCTCGACCGCACGGACGACGTG GTCCGGCGCACGCCCTTCCGGGACACAGGGCGCTTCGTCAGGGGCGAGTGGGAGGAGGTC GTGTACTCCAGGCCCGACGTGAATCACAAGCACGTCTACGCGCTGCACAACCCCTTCAGC AACGTCACCGTGCCCCTCCCGGACCTGGACGCCGTCATTGGCCATGTCGCCGAGACCTTC CGGGTGCTTAAAGTGCTCATGCGTTCGCCGGCTCCCGACGACCTCATCGCCGTCACGACC AACAGCTGGAACTGCAACGTCATCTTGTGTCGTCCTGGGAAGGGCACGTGCGTGCTACCC TATTACAGGGTCGTGGACGTCGCGTTCCTTGGCGGCGACACGCTGTACGGAATCACCTCC GGTGAGGAACTCATTGCCTTCCACCTCGGCGAGGATGACATACCTGATGTTACCAAGATC GAGCTAGTCATCAAGAACCCGTTGGCCTGTTATTATTATGAATGTGGATGGGTGTGGCCA GAAGAAGTACTAGTTGACTACACTAGCAACGAGGAGGATGATTATTATTACACGGATGAG GAGGAGGACCCGGAGGATATAAACGAAGAAGAGGCAGCCGATGATGAGCCAGCGGACCAA CAAGCATTGGAGGACAGCTTCAACGGCGACGAGATGGTCTCGGACAACGAGGTGCTTGGA GCCAAGGACAAGGACTTGCTACTTACGGGTCGATACCTGGTGCAGTCGCTGAGCGGGGAG CTACTGCTCGTGAGGCACCATAGGCGGGCATGCCCGCATTGCCTAGGCCGCACTTGCAAT CTCGAGGTCTTCAAGGCAGATTTTAGCGCGGGCAAGTGGGTGGCCGCCGGATTGGCCAAG GACGAGGCGATTTTTCTCAGTCGATCGCACAGCAAGTGCGCTCGCGCACGCAGAGGCATC AGGCAAGGCTTTGTTTACTATACAACACGTATCAACGACGTGTTCGACACCACATCCAGC ACTGTTCGTGCCATTACAGTTGGGTGGCCACGGCTATGCGTAGCGGAGAAATCGGGATGG TTTTTCCCTCCGGAGCTTGTGGTTTGA

Peptide Sequence

PEP ID	Zm00001d034983_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:786226:787774:1 gene:Zm00001d034983 transcript:Zm00001d034983_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein from transposon TNT 1-94
Sequence	MAAAAAGWADLPLDMLDEVIARLPIPGDRARLAAVCRAWRSAAREVVSHLPWIVLPYGTA CTAGHGAACSAFRIPGFPDDTTCLGAAYDCWLALDRTDDVVRRTPFRDTGRFVRGEWEEV VYSRPDVNHKHVYALHNPFSNVTVPLPDLDAVIGHVAETFRVLKVLMRSPAPDDLIAVTT NSWNCNVILCRPGKGTCVLPYYRVVDVAFLGGDTLYGITSGEELIAFHLGEDDIPDVTKI ELVIKNPLACYYYECGWVWPEEVLVDYTSNEEDDYYYTDEEEDPEDINEEEAADDEPADQ QALEDSFNGDEMVSDNEVLGAKDKDLLLTGRYLVQSLSGELLLVRHHRRACPHCLGRTCN LEVFKADFSAGKWVAAGLAKDEAIFLSRSHSKCARARRGIRQGFVYYTTRINDVFDTTSS TVRAITVGWPRLCVAEKSGWFFPPELVV

Transcript Sequence

Transcript ID	Zm00001d034983_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:786226:787774:1 gene:Zm00001d034983 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein from transposon TNT 1-94
Sequence	ATGGCAGCAGCAGCAGCAGGGTGGGCCGACCTCCCACTCGACATGCTGGACGAGGTCATC GCGCGCCTCCCGATCCCCGGCGACCGTGCCCGCTTGGCCGCCGTGTGCCGCGCATGGCGC TCCGCCGCGCGCGAGGTCGTGAGCCACCTCCCGTGGATCGTGCTCCCATACGGCACCGCC TGCACCGCCGGCCACGGCGCGGCCTGTTCCGCCTTCCGGATCCCCGGGTTCCCCGACGAC ACCACCTGCCTCGGCGCCGCCTACGACTGCTGGCTCGCCCTCGACCGCACGGACGACGTG GTCCGGCGCACGCCCTTCCGGGACACAGGGCGCTTCGTCAGGGGCGAGTGGGAGGAGGTC GTGTACTCCAGGCCCGACGTGAATCACAAGCACGTCTACGCGCTGCACAACCCCTTCAGC AACGTCACCGTGCCCCTCCCGGACCTGGACGCCGTCATTGGCCATGTCGCCGAGACCTTC CGGGTGCTTAAAGTGCTCATGCGTTCGCCGGCTCCCGACGACCTCATCGCCGTCACGACC AACAGCTGGAACTGCAACGTCATCTTGTGTCGTCCTGGGAAGGGCACGTGCGTGCTACCC TATTACAGGGTCGTGGACGTCGCGTTCCTTGGCGGCGACACGCTGTACGGAATCACCTCC GGTGAGGAACTCATTGCCTTCCACCTCGGCGAGGATGACATACCTGATGTTACCAAGATC GAGCTAGTCATCAAGAACCCGTTGGCCTGTTATTATTATGAATGTGGATGGGTGTGGCCA GAAGAAGTACTAGTTGACTACACTAGCAACGAGGAGGATGATTATTATTACACGGATGAG GAGGAGGACCCGGAGGATATAAACGAAGAAGAGGCAGCCGATGATGAGCCAGCGGACCAA CAAGCATTGGAGGACAGCTTCAACGGCGACGAGATGGTCTCGGACAACGAGGTGCTTGGA GCCAAGGACAAGGACTTGCTACTTACGGGTCGATACCTGGTGCAGTCGCTGAGCGGGGAG CTACTGCTCGTGAGGCACCATAGGCGGGCATGCCCGCATTGCCTAGGCCGCACTTGCAAT CTCGAGGTCTTCAAGGCAGATTTTAGCGCGGGCAAGTGGGTGGCCGCCGGATTGGCCAAG GACGAGGCGATTTTTCTCAGTCGATCGCACAGCAAGTGCGCTCGCGCACGCAGAGGCATC AGGCAAGGCTTTGTTTACTATACAACACGTATCAACGACGTGTTCGACACCACATCCAGC ACTGTTCGTGCCATTACAGTTGGGTGGCCACGGCTATGCGTAGCGGAGAAATCGGGATGG TTTTTCCCTCCGGAGCTTGTGGTTTGACAGAGTTGTGCTGGTGTCTCTGACTATTTTCAT CCACATTTCTTTTAATTAGGTCTAGTGCTTCTTCTTCTTTTTTGCAAACTATAATACATC GACTCAACAAGCCTGTCCATCCCAAACTGCCTGAAATTCATGTTTTGTATCCACAGAGAG GTAAGTGTTTTTGAGCTGATGGTCAAATAGCTGCAAAAGTTTTGTACGG