Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034968_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:6:380883:385449:-1 gene:Zm00001d034968 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flap endonuclease GEN-like 2
Sequence

ATGGGGGTGAAGAACCTCTGGGACATCCTTGACTCCTGCAAGAAGAAGCTCCCGCTCCAG
CACCTCCAGAACAAGAAGGTGTGCGTGGATCTTTCCTGCTGGCTCGTGCAGTTCTGCAGC
GCCAACCGCTCCCCGGCCTTCCTCAGGGACAAGGTGTACCTCAAGAACCTCTTCCACCGC
ATCCGAGCCCTCATCGCCCTCAACTGCAGCCTCATTTTCGTCTCAGATGGGGCGATTCCT
TCAGTCAAATTGGCTACTTATAGGCGCCGACTGGGATTAAATGCTGCTGAGGCTACTCGA
GAGGAGGCCAACTCACAACCTCTGACTTCTTTGCGTCGGAACAAGAGCTCAGAGTTCTCA
CGCATGATCAAAGAAGCCAAGCATCTCGGGTTGGCCCTTGGCATCCCTTGCTTGGATGGC
ATGGAAGAAGCCGAAGCACAGTGTGCATTGCTTAATTTTTCTTCCTTGTGTGATGGCTGT
TTTACATCGGATTCAGATTCATTCTTGTTTGGTGCAAAGACAGTTTATAGAGATGTTTTC
ATAGGAGAGGGTGGTTATGTAATTTGCTATGAAATGGAAGACATTCAGAATAAGCTTGGT
TTCGGCAGGAACTCACTGATATCACTTGCAGTCCTTCTTGGTAGTGACTATTCTAATGGA
GTCCATGGCTTTGGCCCAGAAGCAGCATGCCGCCTTGTTAAGTCTTTAGGGGATGACACC
GTTCTTGGTCAAATTTTGTCCGATGGAGTTAAACCTGCAAGAAAATGTAAAGGAAAAGGC
AGTGGCGCCAATGCAGGGACGGTTGGTGGAACGTGCCCAAAAGCAAGTACCTGTGAGGTT
GGGATTAACCAAGATTCTGGTAGTCAATTTCGTGACATAATAAATGCATATCTGGAGCCA
AAATGTCATTCACCAGATTCAGAAGCTGTGCAGAGGGCATGCAGCCAGCGGCCATTTCTT
CGTTCACAACTCCATCAGATATGCGAGCAATACTTTGCGTGGAGCCCTGTGAAAACTGAT
GAATATATCCTTCCAAAGATTGCTGAGAGAGAACTTCGAAGATTTTCAAATCTCCGCTCC
ACGTCTTCAGATCTAGGAATGAAACCTTCGCTGAATGAGATTCCTGTACCGTGTCCTGTA
CTGGCGATTGTGAAGCAGCGAAAAGTTCAAGGAAGTGAATATTATGAGGTTTCATGGAGA
AACATAGATGGGCTCCAAGTTTCAGTTGTTCCAGGGGAACTTGTTAGAAGTGCTTGCCCA
GAAAAAATAACTGAATTTTTGGAAAGCAAGGATGCTCAGAAGAAACAAAAGAGGAGAGCT
AGGCCAAAGAAATCTGGTCAAGCTGCCGTAAAAGACGTGGATGCGCAGCTCCAAGAATTG
CTACTTGGAATTGAATCTGAAAGTGGTAGCTTTCCATGTACGGCCAATGGCCCTCAGACA
GCAGCTATACAGATGGTTGCACCGCTCCAGGAATTTGTTGATCTATCTTCTCCATCACCA
CCTATACGATCTTGTAAGATTGCCAGGTCCAGAAAGTTGAGTGATTCAGACACAGTAACA
ATGGATGGGATTCATCTGCAGCACCAAAGTCTGCAGATTGGATCGATGGAGTCAAATTCG
GCACTGGGTCTTGAGCCAATTGATCTGTCATCACCCTCGCCTTGTGCTGCTCATAAACCC
CAGGCTGCTCCAGAAGCACCACCACTGTGTATGGAGGCAGAAAGAAGAGCCCTTTGGGAT
ATAAGCAATTTGGTCGAGAAAGAACCCTCCTGTTGCAAGCATGAACCTGGAACAAATGTG
CAGGTGGAAGAGTCACCATTGTTCAGGCATGGGACTGGGATGGCAGGCGAAGCTGATTCT
TCACGGAGAGGCGATGCGCAGAGTAGGGAAGTAGTAGAAGCTGCCATGATCGACCTCTCT
TCTCCATCACCAGTTAAAGTCGATAATAGTAGAAGGAATGGTAAGAAGGATTGTGAGGCT
GGCAGCAGCAGTCAGTCTCCAGAACACGAGAGGAAAGCGAGGGAGCTCAGATTGTTCCTA
GACAGTATAAGAGACGAGTTGTATTAA

Peptide Sequence

PEP ID

Zm00001d034968_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:6:380883:385449:-1 gene:Zm00001d034968 transcript:Zm00001d034968_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flap endonuclease GEN-like 2
Sequence

MGVKNLWDILDSCKKKLPLQHLQNKKVCVDLSCWLVQFCSANRSPAFLRDKVYLKNLFHR
IRALIALNCSLIFVSDGAIPSVKLATYRRRLGLNAAEATREEANSQPLTSLRRNKSSEFS
RMIKEAKHLGLALGIPCLDGMEEAEAQCALLNFSSLCDGCFTSDSDSFLFGAKTVYRDVF
IGEGGYVICYEMEDIQNKLGFGRNSLISLAVLLGSDYSNGVHGFGPEAACRLVKSLGDDT
VLGQILSDGVKPARKCKGKGSGANAGTVGGTCPKASTCEVGINQDSGSQFRDIINAYLEP
KCHSPDSEAVQRACSQRPFLRSQLHQICEQYFAWSPVKTDEYILPKIAERELRRFSNLRS
TSSDLGMKPSLNEIPVPCPVLAIVKQRKVQGSEYYEVSWRNIDGLQVSVVPGELVRSACP
EKITEFLESKDAQKKQKRRARPKKSGQAAVKDVDAQLQELLLGIESESGSFPCTANGPQT
AAIQMVAPLQEFVDLSSPSPPIRSCKIARSRKLSDSDTVTMDGIHLQHQSLQIGSMESNS
ALGLEPIDLSSPSPCAAHKPQAAPEAPPLCMEAERRALWDISNLVEKEPSCCKHEPGTNV
QVEESPLFRHGTGMAGEADSSRRGDAQSREVVEAAMIDLSSPSPVKVDNSRRNGKKDCEA
GSSSQSPEHERKARELRLFLDSIRDELY

Transcript Sequence

Transcript ID

Zm00001d034968_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:380883:385449:-1 gene:Zm00001d034968 gene_biotype:protein_coding transcript_biotype:protein_coding description:Flap endonuclease GEN-like 2
Sequence

GAATCCGCGACCCTCCGACAGTGCTGTTTTCCGTTAGAGGCTTCTCGTCTTCCCCGGCTC
AGGCAACCTCCAGCTGCAGCGGCGGCGATGGGGGTGAAGAACCTCTGGGACATCCTTGAC
TCCTGCAAGAAGAAGCTCCCGCTCCAGCACCTCCAGAACAAGAAGGTGTGCGTGGATCTT
TCCTGCTGGCTCGTGCAGTTCTGCAGCGCCAACCGCTCCCCGGCCTTCCTCAGGGACAAG
GTGTACCTCAAGAACCTCTTCCACCGCATCCGAGCCCTCATCGCCCTCAACTGCAGCCTC
ATTTTCGTCTCAGATGGGGCGATTCCTTCAGTCAAATTGGCTACTTATAGGCGCCGACTG
GGATTAAATGCTGCTGAGGCTACTCGAGAGGAGGCCAACTCACAACCTCTGACTTCTTTG
CGTCGGAACAAGAGCTCAGAGTTCTCACGCATGATCAAAGAAGCCAAGCATCTCGGGTTG
GCCCTTGGCATCCCTTGCTTGGATGGCATGGAAGAAGCCGAAGCACAGTGTGCATTGCTT
AATTTTTCTTCCTTGTGTGATGGCTGTTTTACATCGGATTCAGATTCATTCTTGTTTGGT
GCAAAGACAGTTTATAGAGATGTTTTCATAGGAGAGGGTGGTTATGTAATTTGCTATGAA
ATGGAAGACATTCAGAATAAGCTTGGTTTCGGCAGGAACTCACTGATATCACTTGCAGTC
CTTCTTGGTAGTGACTATTCTAATGGAGTCCATGGCTTTGGCCCAGAAGCAGCATGCCGC
CTTGTTAAGTCTTTAGGGGATGACACCGTTCTTGGTCAAATTTTGTCCGATGGAGTTAAA
CCTGCAAGAAAATGTAAAGGAAAAGGCAGTGGCGCCAATGCAGGGACGGTTGGTGGAACG
TGCCCAAAAGCAAGTACCTGTGAGGTTGGGATTAACCAAGATTCTGGTAGTCAATTTCGT
GACATAATAAATGCATATCTGGAGCCAAAATGTCATTCACCAGATTCAGAAGCTGTGCAG
AGGGCATGCAGCCAGCGGCCATTTCTTCGTTCACAACTCCATCAGATATGCGAGCAATAC
TTTGCGTGGAGCCCTGTGAAAACTGATGAATATATCCTTCCAAAGATTGCTGAGAGAGAA
CTTCGAAGATTTTCAAATCTCCGCTCCACGTCTTCAGATCTAGGAATGAAACCTTCGCTG
AATGAGATTCCTGTACCGTGTCCTGTACTGGCGATTGTGAAGCAGCGAAAAGTTCAAGGA
AGTGAATATTATGAGGTTTCATGGAGAAACATAGATGGGCTCCAAGTTTCAGTTGTTCCA
GGGGAACTTGTTAGAAGTGCTTGCCCAGAAAAAATAACTGAATTTTTGGAAAGCAAGGAT
GCTCAGAAGAAACAAAAGAGGAGAGCTAGGCCAAAGAAATCTGGTCAAGCTGCCGTAAAA
GACGTGGATGCGCAGCTCCAAGAATTGCTACTTGGAATTGAATCTGAAAGTGGTAGCTTT
CCATGTACGGCCAATGGCCCTCAGACAGCAGCTATACAGATGGTTGCACCGCTCCAGGAA
TTTGTTGATCTATCTTCTCCATCACCACCTATACGATCTTGTAAGATTGCCAGGTCCAGA
AAGTTGAGTGATTCAGACACAGTAACAATGGATGGGATTCATCTGCAGCACCAAAGTCTG
CAGATTGGATCGATGGAGTCAAATTCGGCACTGGGTCTTGAGCCAATTGATCTGTCATCA
CCCTCGCCTTGTGCTGCTCATAAACCCCAGGCTGCTCCAGAAGCACCACCACTGTGTATG
GAGGCAGAAAGAAGAGCCCTTTGGGATATAAGCAATTTGGTCGAGAAAGAACCCTCCTGT
TGCAAGCATGAACCTGGAACAAATGTGCAGGTGGAAGAGTCACCATTGTTCAGGCATGGG
ACTGGGATGGCAGGCGAAGCTGATTCTTCACGGAGAGGCGATGCGCAGAGTAGGGAAGTA
GTAGAAGCTGCCATGATCGACCTCTCTTCTCCATCACCAGTTAAAGTCGATAATAGTAGA
AGGAATGGTAAGAAGGATTGTGAGGCTGGCAGCAGCAGTCAGTCTCCAGAACACGAGAGG
AAAGCGAGGGAGCTCAGATTGTTCCTAGACAGTATAAGAGACGAGTTGTATTAACATTCG
ATTGGATTGTATGTAAACCGATATGTGCAATGATGATGTGTGTTCTCCATT