Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034954_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:306615518:306619916:1 gene:Zm00001d034954 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pleckstrin homology (PH) domain-containing protein
Sequence

ATGGCCACCAACGGCAGCTCTCCGAGGGTTCGGGACACGGAGAGCAGTCTGGAGAAGGTG
AAGCGGCAGCTGTCATCGGGGTCTGGGAGGTACCTGCTGCAAGGGCCCCTGCTCAAGCGA
TCTGAGACGTTACGGAAATGGAATGAGCGTTGGGTCATATTGGACCCGACATCAGGAAAG
ATGGAATACAAACTCCGGAGAAATGAAACTGCCATTAAGGGGACCATTCTGTTTGACGCC
TCGAGCACCATTACTTTATCTCCTGTGAACTTTCAAGGGATGCCAAAATATAATGGCTGC
TGCTTCTACATCGGAACTCCTCAAAAGAAGGATTACTTTCTTTGTGCTGAAACTCCTGGT
GCTGCGAAAGCTTGGGTATCTACATTACATGCAACTCAGTTAGTCTTACGAGCTCATAAA
GAGGCAGTAAATTCTTTGGCTGGGAATGGCTCTCCAGCTACATTAGGCACAGTTGCTACT
GCAGTTGCTAATGCTAATGCAACAGCCATGGAGGCTACCAAGGAGATAGAAGCTGCACTA
AAGGTTTCAATGAGGGCAGCTCTTGGGTTGGATACAAATAACTCCAACGAGGGCCAACTT
GATGACCTAACAATCATGAAGGAGACCCTACGAGTGAAAGATGAGGAATTGCAACATTTG
GCTAAGGATATTCGTTCCCGAGATGCTACAATAAAGGAAATAGCGGACAAACTAACAGAA
ACTGCTGAGGCTGCAGAAGCTGCTGCTTCTGCAGCTCATACAATGGATGAACAGAGGCAG
CTTTTGTGTTCGGAGATTGAGCGACTAAAACAAGCCTTGGAAAGACAAATAGAACAATCA
GTGGTTAAGCTTAGACAATCCGAAGAGAAGGTTATCAGCCTGAGCAAAGAGAAGGAGCAG
TTGATGAAGGAAAGAGATGCTGCATTTCAGGAGGCTCATATGTGGCGCATTGAACTAGTA
AAAGCCAGGGAGCAAGCAGTGATACAGGAAGCAACTATTGCCCGAGCAGAGGAGAAGGCT
AGAGTTTCTGAAGCAGATGCCGCAGCTCGGATCAAGGAAGCTGCTGAAAAGTTGCATACT
GTTGAGAAAGAAAAGGAGGAGCTTCTAGCCCTGAGAGCAGAGCAGCACAAAGCAAGTATG
CGAGGAGAGGTCTGA

Peptide Sequence

PEP ID

Zm00001d034954_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:306615518:306619916:1 gene:Zm00001d034954 transcript:Zm00001d034954_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pleckstrin homology (PH) domain-containing protein
Sequence

MATNGSSPRVRDTESSLEKVKRQLSSGSGRYLLQGPLLKRSETLRKWNERWVILDPTSGK
MEYKLRRNETAIKGTILFDASSTITLSPVNFQGMPKYNGCCFYIGTPQKKDYFLCAETPG
AAKAWVSTLHATQLVLRAHKEAVNSLAGNGSPATLGTVATAVANANATAMEATKEIEAAL
KVSMRAALGLDTNNSNEGQLDDLTIMKETLRVKDEELQHLAKDIRSRDATIKEIADKLTE
TAEAAEAAASAAHTMDEQRQLLCSEIERLKQALERQIEQSVVKLRQSEEKVISLSKEKEQ
LMKERDAAFQEAHMWRIELVKAREQAVIQEATIARAEEKARVSEADAAARIKEAAEKLHT
VEKEKEELLALRAEQHKASMRGEV

Transcript Sequence

Transcript ID

Zm00001d034954_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:306615518:306619916:1 gene:Zm00001d034954 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pleckstrin homology (PH) domain-containing protein
Sequence

AGCCTACCAGAAGCGTTTCCGGCAGCGAGGTTTCCTCCCATCGATCTGTACGCCCTCCCC
ACCGGTGGGTCGCGCACCTCCACCAACCTACCTTCCCGCCCCGCCCGTCGCCGTCGACGA
CTCGCCGTCCGTTTCCGCCCTCCAAAACCCTACTACCTCTTACCTTCCAGCCCCGCGTCC
TCCATGGCCACCAACGGCAGCTCTCCGAGGGTTCGGGACACGGAGAGCAGTCTGGAGAAG
GTGAAGCGGCAGCTGTCATCGGGGTCTGGGAGGTACCTGCTGCAAGGGCCCCTGCTCAAG
CGATCTGAGACGTTACGGAAATGGAATGAGCGTTGGGTCATATTGGACCCGACATCAGGA
AAGATGGAATACAAACTCCGGAGAAATGAAACTGCCATTAAGGGGACCATTCTGTTTGAC
GCCTCGAGCACCATTACTTTATCTCCTGTGAACTTTCAAGGGATGCCAAAATATAATGGC
TGCTGCTTCTACATCGGAACTCCTCAAAAGAAGGATTACTTTCTTTGTGCTGAAACTCCT
GGTGCTGCGAAAGCTTGGGTATCTACATTACATGCAACTCAGTTAGTCTTACGAGCTCAT
AAAGAGGCAGTAAATTCTTTGGCTGGGAATGGCTCTCCAGCTACATTAGGCACAGTTGCT
ACTGCAGTTGCTAATGCTAATGCAACAGCCATGGAGGCTACCAAGGAGATAGAAGCTGCA
CTAAAGGTTTCAATGAGGGCAGCTCTTGGGTTGGATACAAATAACTCCAACGAGGGCCAA
CTTGATGACCTAACAATCATGAAGGAGACCCTACGAGTGAAAGATGAGGAATTGCAACAT
TTGGCTAAGGATATTCGTTCCCGAGATGCTACAATAAAGGAAATAGCGGACAAACTAACA
GAAACTGCTGAGGCTGCAGAAGCTGCTGCTTCTGCAGCTCATACAATGGATGAACAGAGG
CAGCTTTTGTGTTCGGAGATTGAGCGACTAAAACAAGCCTTGGAAAGACAAATAGAACAA
TCAGTGGTTAAGCTTAGACAATCCGAAGAGAAGGTTATCAGCCTGAGCAAAGAGAAGGAG
CAGTTGATGAAGGAAAGAGATGCTGCATTTCAGGAGGCTCATATGTGGCGCATTGAACTA
GTAAAAGCCAGGGAGCAAGCAGTGATACAGGAAGCAACTATTGCCCGAGCAGAGGAGAAG
GCTAGAGTTTCTGAAGCAGATGCCGCAGCTCGGATCAAGGAAGCTGCTGAAAAGTTGCAT
ACTGTTGAGAAAGAAAAGGAGGAGCTTCTAGCCCTGAGAGCAGAGCAGCACAAAGCAAGT
ATGCGAGGAGAGGTCTGAATCATGCTCAGGCGCCGATAATTCACCTCTGTTGACAAAGCA
TGTTGACGCATCAGACGATGATGTGGACAAAGCCTGCGTAAGTGACTCTAGATCGGTCCC
GGTTTCGAGCGATAGCACTGAGGTCCAGCTGGCTGTGGATGGGGTGGACATCCGTCCTGT
TGGCGATGCAGAGTGGAGTAGCTTCCAGCAGCCAGAAGCGCTGATCGCTGATGTCCGGGA
GGTCTCCCCAGAGGCGGACGGCGGCAGCTTGGATATTCCTGTGGTCAATCCCCCACCAGT
CAGTGATCATATCCAGGGAGGCGGCGGCGCAACCCATCCCTGAAGGCCTGAGGTTGCTGC
TACCTTCCGAGATTGGTGTGGTTGCTGAGAACCCAATAGATAGGGATGTCTAAATCTGGA
GAGAAGTGCCGTTGAGAGTGTATGCGGATTGTATGTCCATTGTATTCGGAGTATAAGACC
GAATAAAAAGATCGCAGCTGTGTTTGGCTGTGGGATTGTAAAAAACTTTTAGCGCTACAC
CTCAACAGGACTGGGCCCTCTTGGGCTACCGGCCGGCACTGCCCTGCTGCTCGTACTCCT
GCTGACTTGGAAAAACATCAGGCAGCAAGCTAGGCGAGATGTTGCTTTTATCTCTTGGGA
CAGTTCAC