Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034931_T035
CDS Infomation	cds chromosome:B73_RefGen_v4:1:306066101:306070745:1 gene:Zm00001d034931 gene_biotype:protein_coding transcript_biotype:protein_coding description:COP1-interacting protein-related
Sequence	ATGGTTTTCGAGTCTGCAGATGAATATAGCAAGAATGGAATGTCATATGGGCAAGATGGA GACCAAGGGAGCTGGAATGTTTTCCAGAGTTTCCTGCTAAGAGCTGATGAGAAAAGAGAT AATGACGCGGACCTATTCGCCAGTGAGAAAAAAGCACCCCCAGCAAGGATGAAGGAGAGC ACAAGCGTTGATGTTGATTCAATTCTCTTGGTGGAGCAAAATTCTGCTGGGGCCAATGAA CATAATACAACAGGTTTCAGTATGGAAAATGAGAGGATTAGACCCCAGCAGATGCTGTCT GGTGATGAACTTATGATGTATGGGGAAGGTGAAGGCATGAGCTTTGGATGTGATGACATA AAGGAGATTGAAGCTGGAGGTGTGAGATACAGAAGAGGAACAAGTGATGACTTCATGATA TATGGACAGGAAAAGTCAATGGACAGAGGGAGTTCTTTGGATCCTCTTGCAGAAGCACAG TACAAGAGCCCCACCCTGGTTGACAAAAATGTGCACAGCTTGGCAGATGAATCGTTTATG ATACCTCTTAGGTCTACCTCAGAGGATAACCATGAACCAGAATGTCGTACTGCCATTGAC ATTGATGTTGAGCTTCCCTCAACTGTTCAGAAGATATCAGATGCTAAAGCTGGTAGTCAG CTTTTCTATGAGCCAGCTGAATTGATGCCGGAGCGTGGATGTGAAGACGTTTCGTTTGGA TATGATCCAGCAATGGATTATAATAGTCAGATACAGAGTCAATCTGCCACCATGGTTGAA GATGCACATATGGAAGATGCATTGTTGAGCACTGTGGATGAAATAAAGAAGCCAGAGAAA GACAAGAAGCTAAGAAGTTCACAGGAGAGTTTGGATAAACGTAGAAAAGATGCTTCAGCG AGGAGGTTGTCATCATCAAAAGGCCCGCTGACTGATGCACAGAAACGCGCACAAAACTTG CGAATATATAAAGCGGACCTTCAGAAGGCAAAGAAAGAGCAGGAAGAGGAACAGATCAAA CGGCTAGAAAGGCTTAAGCTAGAGAGGCAAAAGAGGATTGCTGCAAGAAGCAGCACTTCC AATGCACCAACACCACAGCAGCCCAGAGTAAAGCCTTCTCCCAAGGTTTCCCCCAGCACC TACAAGAGCTCAAAGCTCAGCGATACCGAACTTGCATCCTCTTCACCTCTCAGAAAATTT CCTATCAAAACTACCCCAGGGACTGATCCTGAAAAAACAGCAAAATCAAGCAAACTAAAT GACAATACTAATGCAGTTAGTAAGCCAACCTTGACAGACATGAAGGAGAGAAGTGGGAGG ACCGAATCATCCAACGAGAGATTGAGAAAACTTGCTGAACCTAAAACCAACAGTTCGACT GGCCATACTTTGAATTCCAAGTCAGCAAGCGTGGACCGCCCGCGGAGAAAAAGCATGCCA CAAGATAGCCAGACAAAGAAAATTTCAGCTATAATGCAGCTTGACCAGAGTAAATCAGCA ACACTACCAGAACTGAAGGTCAAATACTCGCAAGCTCCTGCTGTTGTGAAAAATGCAGTA GCTAGTAGAGAGAGAAAAGAGGTTTCAGCTGGAGCTAAATCTCTTCGTACAACAGAAACT GCTAGTGTAAAGGAAACCAACGGTAACATCTCAAGGATGAACAGCAGCGACGATAATGTG GTGGTTGAGAAGACCGTTGTGATGCTCGAAGATGAGGCGGTCATTCTACATTCTGGAAGA AATGCAGCAAAGGAAACTTGTAGTGATGACAGGACAGAGAAGCCCAGCCCAGAATCGGAG TACATAGCTATCAGGGCTCCGCTGTCTCCAGTTATTCTTCCGGAGGCTGAGAGATCTGAT GACCTGGGGAGCTCATATGAGGTGGTGACTGAGTGTCTAAAGGATGAACCTGAGGAGCCA ACCTTGGGCGCCGTGGAGAAACCTTACCAGGCCCCCTTTGCTAGGGTGACATCGCTGGAG AATGCATCAGACAACAGTCCATTACCTGAATCACTTGCGCATGCAAATAGCATTAAGGCT CGAGTGCCTGAGCCTGTGTACACAGTTTCAGTTGAGGGCCATGTGGTAAGTGAAAAGCCT CGAAGCAAAGAGCCAAAAGGCTTGAGGAAACTTTTGAAATTTGGCAGGAAAAGCCATGCT GAGGGCGCAATGGATTCATCAGTTGACGAAGCCTCAGCAGGAGATGGTTCGATGCTGAAG AATCTCATTTCTCAAGATGACTCTGGTGCGTCTTCTTCCTTCTCGGTCCTTCTCCCTACT GTCACCGTTCCGCAGCAAGCACAAGGTGATTGTTCTGTGAGCACAAGG

Peptide Sequence

PEP ID	Zm00001d034931_P035
PEP Infomation	pep chromosome:B73_RefGen_v4:1:306066101:306070745:1 gene:Zm00001d034931 transcript:Zm00001d034931_T035 gene_biotype:protein_coding transcript_biotype:protein_coding description:COP1-interacting protein-related
Sequence	MVFESADEYSKNGMSYGQDGDQGSWNVFQSFLLRADEKRDNDADLFASEKKAPPARMKES TSVDVDSILLVEQNSAGANEHNTTGFSMENERIRPQQMLSGDELMMYGEGEGMSFGCDDI KEIEAGGVRYRRGTSDDFMIYGQEKSMDRGSSLDPLAEAQYKSPTLVDKNVHSLADESFM IPLRSTSEDNHEPECRTAIDIDVELPSTVQKISDAKAGSQLFYEPAELMPERGCEDVSFG YDPAMDYNSQIQSQSATMVEDAHMEDALLSTVDEIKKPEKDKKLRSSQESLDKRRKDASA RRLSSSKGPLTDAQKRAQNLRIYKADLQKAKKEQEEEQIKRLERLKLERQKRIAARSSTS NAPTPQQPRVKPSPKVSPSTYKSSKLSDTELASSSPLRKFPIKTTPGTDPEKTAKSSKLN DNTNAVSKPTLTDMKERSGRTESSNERLRKLAEPKTNSSTGHTLNSKSASVDRPRRKSMP QDSQTKKISAIMQLDQSKSATLPELKVKYSQAPAVVKNAVASRERKEVSAGAKSLRTTET ASVKETNGNISRMNSSDDNVVVEKTVVMLEDEAVILHSGRNAAKETCSDDRTEKPSPESE YIAIRAPLSPVILPEAERSDDLGSSYEVVTECLKDEPEEPTLGAVEKPYQAPFARVTSLE NASDNSPLPESLAHANSIKARVPEPVYTVSVEGHVVSEKPRSKEPKGLRKLLKFGRKSHA EGAMDSSVDEASAGDGSMLKNLISQDDSGASSSFSVLLPTVTVPQQAQGDCSVSTR

Transcript Sequence

Transcript ID	Zm00001d034931_T035
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:306066101:306070745:1 gene:Zm00001d034931 gene_biotype:protein_coding transcript_biotype:protein_coding description:COP1-interacting protein-related
Sequence	CACGCCAAGTCCAGAAAGAAAAAGAATAATAGCTCAAGTTCAAAGAAAAAAGATGCTAGG AAGATGGTTTTCGAGTCTGCAGATGAATATAGCAAGAATGGAATGTCATATGGGCAAGAT GGAGACCAAGGGAGCTGGAATGTTTTCCAGAGTTTCCTGCTAAGAGCTGATGAGAAAAGA GATAATGACGCGGACCTATTCGCCAGTGAGAAAAAAGCACCCCCAGCAAGGATGAAGGAG AGCACAAGCGTTGATGTTGATTCAATTCTCTTGGTGGAGCAAAATTCTGCTGGGGCCAAT GAACATAATACAACAGGTTTCAGTATGGAAAATGAGAGGATTAGACCCCAGCAGATGCTG TCTGGTGATGAACTTATGATGTATGGGGAAGGTGAAGGCATGAGCTTTGGATGTGATGAC ATAAAGGAGATTGAAGCTGGAGGTGTGAGATACAGAAGAGGAACAAGTGATGACTTCATG ATATATGGACAGGAAAAGTCAATGGACAGAGGGAGTTCTTTGGATCCTCTTGCAGAAGCA CAGTACAAGAGCCCCACCCTGGTTGACAAAAATGTGCACAGCTTGGCAGATGAATCGTTT ATGATACCTCTTAGGTCTACCTCAGAGGATAACCATGAACCAGAATGTCGTACTGCCATT GACATTGATGTTGAGCTTCCCTCAACTGTTCAGAAGATATCAGATGCTAAAGCTGGTAGT CAGCTTTTCTATGAGCCAGCTGAATTGATGCCGGAGCGTGGATGTGAAGACGTTTCGTTT GGATATGATCCAGCAATGGATTATAATAGTCAGATACAGAGTCAATCTGCCACCATGGTT GAAGATGCACATATGGAAGATGCATTGTTGAGCACTGTGGATGAAATAAAGAAGCCAGAG AAAGACAAGAAGCTAAGAAGTTCACAGGAGAGTTTGGATAAACGTAGAAAAGATGCTTCA GCGAGGAGGTTGTCATCATCAAAAGGCCCGCTGACTGATGCACAGAAACGCGCACAAAAC TTGCGAATATATAAAGCGGACCTTCAGAAGGCAAAGAAAGAGCAGGAAGAGGAACAGATC AAACGGCTAGAAAGGCTTAAGCTAGAGAGGCAAAAGAGGATTGCTGCAAGAAGCAGCACT TCCAATGCACCAACACCACAGCAGCCCAGAGTAAAGCCTTCTCCCAAGGTTTCCCCCAGC ACCTACAAGAGCTCAAAGCTCAGCGATACCGAACTTGCATCCTCTTCACCTCTCAGAAAA TTTCCTATCAAAACTACCCCAGGGACTGATCCTGAAAAAACAGCAAAATCAAGCAAACTA AATGACAATACTAATGCAGTTAGTAAGCCAACCTTGACAGACATGAAGGAGAGAAGTGGG AGGACCGAATCATCCAACGAGAGATTGAGAAAACTTGCTGAACCTAAAACCAACAGTTCG ACTGGCCATACTTTGAATTCCAAGTCAGCAAGCGTGGACCGCCCGCGGAGAAAAAGCATG CCACAAGATAGCCAGACAAAGAAAATTTCAGCTATAATGCAGCTTGACCAGAGTAAATCA GCAACACTACCAGAACTGAAGGTCAAATACTCGCAAGCTCCTGCTGTTGTGAAAAATGCA GTAGCTAGTAGAGAGAGAAAAGAGGTTTCAGCTGGAGCTAAATCTCTTCGTACAACAGAA ACTGCTAGTGTAAAGGAAACCAACGGTAACATCTCAAGGATGAACAGCAGCGACGATAAT GTGGTGGTTGAGAAGACCGTTGTGATGCTCGAAGATGAGGCGGTCATTCTACATTCTGGA AGAAATGCAGCAAAGGAAACTTGTAGTGATGACAGGACAGAGAAGCCCAGCCCAGAATCG GAGTACATAGCTATCAGGGCTCCGCTGTCTCCAGTTATTCTTCCGGAGGCTGAGAGATCT GATGACCTGGGGAGCTCATATGAGGTGGTGACTGAGTGTCTAAAGGATGAACCTGAGGAG CCAACCTTGGGCGCCGTGGAGAAACCTTACCAGGCCCCCTTTGCTAGGGTGACATCGCTG GAGAATGCATCAGACAACAGTCCATTACCTGAATCACTTGCGCATGCAAATAGCATTAAG GCTCGAGTGCCTGAGCCTGTGTACACAGTTTCAGTTGAGGGCCATGTGGTAAGTGAAAAG CCTCGAAGCAAAGAGCCAAAAGGCTTGAGGAAACTTTTGAAATTTGGCAGGAAAAGCCAT GCTGAGGGCGCAATGGATTCATCAGTTGACGAAGCCTCAGCAGGAGATGGTTCGATGCTG AAGAATCTCATTTCTCAAGATGACTCTGGTGCGTCTTCTTCCTTCTCGGTCCTTCTCCCT ACTGTCACCGTTCCGCAGCAAGCACAAGGTGATTGTTCTGTGAGCACAAGGT