Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034919_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:305598350:305602628:-1 gene:Zm00001d034919 gene_biotype:protein_coding transcript_biotype:protein_coding description:RuBisCO large subunit-binding protein subunit alpha
Sequence	ATGGCCACCATTCCGACCACCGATTCTGGCCTCGTCCTCAGTTCCTCCGCTCTCCTCCGG AGGACTAGGAGGGCCGCCTCATCCGTCACCGCCAGGCTGCCAGCCGTCGCCCGCCGTCGC CCGCAGCTCCTCGTGCGTGCCTCCGCCAAGGAGATCGCCTTTGACCAGGGCTCCAGAGCC GCCCTTCAGGCCGGCGTCGAGAAGCTCGCCGCCGCGGTCGGCGTCACCCTCGGACCCAGA GGAAGGAATGTTGTCTTGGATGAGTTTGGAACCCCCAAAGTGGTCAATGATGGAGTTACC ATTGCCCGCGCTATTGAGCTTGCTGATCCCATGGAGAATGCTGGTGCTTCCTTGATTCGT GAAGTTGCTAGCAAGACGAATGACTCGGCTGGTGATGGAACCACAACTGCCTCTGTTCTC GCTAGGGAGATCATCAAATTGGGCATGTTGAGCATTACTTCAGGGGCAAATCCAGTGTCC GTTAAGAAGGGCATTGATAAGACTGTTCAGAAATTGGTGGAGGAACTTGAGAAGAAATCA AGGCCGGTCAAGGGTAGTGGGGATATTAAAGCTGTTGCTGCCATATCAGCTGGAAATGAT GAATTTGTTGGGACTATGATCGCCGAAGCTATTGACAAGGTTGGCCCTGATGGTGTCCTC TCAATTGAGTCGTCATCGTCGTTTGAGACCACAGTTGAAGTTGAAGAAGGGATGGAGCTT GACAGAGGATATATCTCCCCTCAGTTTGTCACTAACCTTGAAAAATCTATTGTTGAGTTC GAAAATGCTCGGATTCTTGTCACTGATCAGAAGATATCATCGATAAAAGAAATTATTCCT CTGTTGGAGCAGACAACACAGTTAAGAGCACCACTTCTTATAATTGCAGAGGATGTAAGT GGCGAGGCGCTGGCAACATTAGTCATAAACAAGCTTAGAGGAATTTTAAATGTGGCTGCA ATCAAAGCTCCTGGTTTTGGTGAGAGGCGTAAAGCTCTTCTTCAGGACATTGCCATTGTT ACAGGTGCTGAATATCAATCCAAAGATCTTGGTCTACTAGTTGAGGATACAACAGTGGAG CAGCTTGGCATAGCTCGGAAAGTTACAATCTCAAGTTCCTCGACGACCATTATAGCAGAT GCTGCTAGCAAAGACGATATCCAGGCCAGAATCGCGCAGCTGAAGAGAGAGCTTTCTCAG ACGGACTCGACGTATGACTCTGAGAAGTTGGCAGAGAGAATTGCAAAGCTTTCTGGTGGA GTTGCTGTGGTTAAGGTTGGAGCATCGACCGAGGCAGAGCTAGAGGACCGCAAGCTCCGC ATAGAGGACGCGAAGAATGCGACTTTTGCAGCAATAGAGGAAGGTATTGTTCCAGGAGGC GGTGCAGCATATGTTCATCTATCGACATTCGTACCGGCTATCAAGGAGACGTTGGATGAT CCTGAGGAGCGCCTAGGTGCTGATATCATTCAGAAGGCTTTGGTGGCACCTGCAGCGCTG ATAGCCCATAATGCTGGGGTGGAAGGTGAGGTGATTGTGGATAAAATCCGGGAAAGCGAG TGGGAGTTCGGTTACAACGCCATGGCGGACAAGCACGAGAACCTGGTGGAGGCTGGTGTG ATCGACCCTGCCAAAGTGACTAGGTGCGCCCTGCAGAACGCTGCCTCCGTGGCTGGAATG GTGCTGACTACCCAAGCAATCGTTGTGGAGAAGCCCAAGAAGGCTCCAGCAGCAGCTGCT GCAGCGGCACCATAG

Peptide Sequence

PEP ID	Zm00001d034919_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:305598350:305602628:-1 gene:Zm00001d034919 transcript:Zm00001d034919_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RuBisCO large subunit-binding protein subunit alpha
Sequence	MATIPTTDSGLVLSSSALLRRTRRAASSVTARLPAVARRRPQLLVRASAKEIAFDQGSRA ALQAGVEKLAAAVGVTLGPRGRNVVLDEFGTPKVVNDGVTIARAIELADPMENAGASLIR EVASKTNDSAGDGTTTASVLAREIIKLGMLSITSGANPVSVKKGIDKTVQKLVEELEKKS RPVKGSGDIKAVAAISAGNDEFVGTMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEL DRGYISPQFVTNLEKSIVEFENARILVTDQKISSIKEIIPLLEQTTQLRAPLLIIAEDVS GEALATLVINKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEYQSKDLGLLVEDTTVE QLGIARKVTISSSSTTIIADAASKDDIQARIAQLKRELSQTDSTYDSEKLAERIAKLSGG VAVVKVGASTEAELEDRKLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTFVPAIKETLDD PEERLGADIIQKALVAPAALIAHNAGVEGEVIVDKIRESEWEFGYNAMADKHENLVEAGV IDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKKAPAAAAAAAP

Transcript Sequence

Transcript ID	Zm00001d034919_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:305598350:305602628:-1 gene:Zm00001d034919 gene_biotype:protein_coding transcript_biotype:protein_coding description:RuBisCO large subunit-binding protein subunit alpha
Sequence	ACCCTCTAGAAGCCTCCGGGTCGCTCGGTGTGGGTTGCTAACTACTCGCAGCAGCCAGAG GCCAGATCCAGCCGCCAACCCCCCAAACAAAACCCTAGGCCACCATTCTGACCACCAGGC ACAAGCAGAGCAGAAGCAGACATGGCCACCATTCCGACCACCGATTCTGGCCTCGTCCTC AGTTCCTCCGCTCTCCTCCGGAGGACTAGGAGGGCCGCCTCATCCGTCACCGCCAGGCTG CCAGCCGTCGCCCGCCGTCGCCCGCAGCTCCTCGTGCGTGCCTCCGCCAAGGAGATCGCC TTTGACCAGGGCTCCAGAGCCGCCCTTCAGGCCGGCGTCGAGAAGCTCGCCGCCGCGGTC GGCGTCACCCTCGGACCCAGAGGAAGGAATGTTGTCTTGGATGAGTTTGGAACCCCCAAA GTGGTCAATGATGGAGTTACCATTGCCCGCGCTATTGAGCTTGCTGATCCCATGGAGAAT GCTGGTGCTTCCTTGATTCGTGAAGTTGCTAGCAAGACGAATGACTCGGCTGGTGATGGA ACCACAACTGCCTCTGTTCTCGCTAGGGAGATCATCAAATTGGGCATGTTGAGCATTACT TCAGGGGCAAATCCAGTGTCCGTTAAGAAGGGCATTGATAAGACTGTTCAGAAATTGGTG GAGGAACTTGAGAAGAAATCAAGGCCGGTCAAGGGTAGTGGGGATATTAAAGCTGTTGCT GCCATATCAGCTGGAAATGATGAATTTGTTGGGACTATGATCGCCGAAGCTATTGACAAG GTTGGCCCTGATGGTGTCCTCTCAATTGAGTCGTCATCGTCGTTTGAGACCACAGTTGAA GTTGAAGAAGGGATGGAGCTTGACAGAGGATATATCTCCCCTCAGTTTGTCACTAACCTT GAAAAATCTATTGTTGAGTTCGAAAATGCTCGGATTCTTGTCACTGATCAGAAGATATCA TCGATAAAAGAAATTATTCCTCTGTTGGAGCAGACAACACAGTTAAGAGCACCACTTCTT ATAATTGCAGAGGATGTAAGTGGCGAGGCGCTGGCAACATTAGTCATAAACAAGCTTAGA GGAATTTTAAATGTGGCTGCAATCAAAGCTCCTGGTTTTGGTGAGAGGCGTAAAGCTCTT CTTCAGGACATTGCCATTGTTACAGGTGCTGAATATCAATCCAAAGATCTTGGTCTACTA GTTGAGGATACAACAGTGGAGCAGCTTGGCATAGCTCGGAAAGTTACAATCTCAAGTTCC TCGACGACCATTATAGCAGATGCTGCTAGCAAAGACGATATCCAGGCCAGAATCGCGCAG CTGAAGAGAGAGCTTTCTCAGACGGACTCGACGTATGACTCTGAGAAGTTGGCAGAGAGA ATTGCAAAGCTTTCTGGTGGAGTTGCTGTGGTTAAGGTTGGAGCATCGACCGAGGCAGAG CTAGAGGACCGCAAGCTCCGCATAGAGGACGCGAAGAATGCGACTTTTGCAGCAATAGAG GAAGGTATTGTTCCAGGAGGCGGTGCAGCATATGTTCATCTATCGACATTCGTACCGGCT ATCAAGGAGACGTTGGATGATCCTGAGGAGCGCCTAGGTGCTGATATCATTCAGAAGGCT TTGGTGGCACCTGCAGCGCTGATAGCCCATAATGCTGGGGTGGAAGGTGAGGTGATTGTG GATAAAATCCGGGAAAGCGAGTGGGAGTTCGGTTACAACGCCATGGCGGACAAGCACGAG AACCTGGTGGAGGCTGGTGTGATCGACCCTGCCAAAGTGACTAGGTGCGCCCTGCAGAAC GCTGCCTCCGTGGCTGGAATGGTGCTGACTACCCAAGCAATCGTTGTGGAGAAGCCCAAG AAGGCTCCAGCAGCAGCTGCTGCAGCGGCACCATAGGGTTCTTTCACCATGTAATAATAC TTTCTAGTGAAAAACAATTTTACTAGGCATGGAACAGGCACGTTAGAGTGACGAGGAGAA AAAACTATTTTTGTCATGCGTGGGCCGGAATAAATTGAGTCAGGAATTGCATGGATTTTG GGCCAGGACGATTTGCAAATTGGTTGGATTAGAGTGTGGATGGCTGATTGGACATTGTAT CCTATCTGCATTCTGTTCACTCAGTTGGCTAATTCACATTTCTCTC