Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034894_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:304956316:304965176:1 gene:Zm00001d034894 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent DNA helicase 2 subunit KU80
Sequence	ATGGCTCGCAACAGGGAAGTGGTGATTTTGCTGTTGGATGTTGGGCCTTCGATGCATGGA GTGCTGCTAGAGGTGAAGAACGTATGCTTGACTCTTGTGCATAAGAAGCTAGTTTATAAC AGGAGCGATGAAGTTGGTATTGTCCTCTTTGGTACTAAAGGAACATGCAATGAGCTTGCA AAGGACATTGGGGGCTATAAGCATGTGACGGTCATACATGATATTAAAGTTGTAGATGAA GGAACGGCACAGGCTCTGCAAAACCTTCCATTAGGATCTGCCCCTGGTGATTTTCTGGAT TCTATTGTTGTTGGCTTGGATATGGTGATTAGGAAATTTGGTATTACCAAAGGGAAGCGG CGGCTCTGTCTAATCACTGGTGCACAAGAACTGTTAAGAGATCCGCCTGAGGGGACCAAA GAAGATCAGGTGGACACCATTGCAAACATGTTGAAAAAACACAATATCAAGATGGAGTGC ATTATTTTCAGAGAACCGGGAGTGCATCATAATGATGTAATGGAAGAAAATGACCGACTA TTGCATCAGTTCAGAAATAGATCAGTAGCAAAGGTAGTTCAGGTTGACAACCCAACATCA CTGTTGGGTGCTCTCAAGACAAGAAATGTGCTCCCAGTTACCGTTTTCAGGGGAGATCTG GAAGTGAACTCCAATTTTAAAATAAAGGTGTGGGTTTATAAGAAAACAGCTGAGGAAAAA TTCCCCACTTTGAAGAAGTATTCGGACAAAGCTCCTCCAAATGATAAATTTGCTTCTCAT GAAGTCAAAGTTGATTATGAGTACAAGAGTGTTGTTGAGCCAGACAAAGTTGTTCCACCA GACCAAAGGATTAAGGGGTATCTCTATGGTCCTCAAGTTATTCCTGTATCAAATGCTGAA TGGGAGGCAGTCAAGTTCAAGCCAGAGAAAGGTGTGAAGCTTCTAGGATTTACAGATAGA TCCAGCGTACCACGGCACCAATTTATGAAAGATGTATGCCTGTTTATACCTGAGCCAGGT AACATGAAAGCAAGTCTTGCAGTTTCTGCGATAGCAAGAGCAATGCATCAAATGAACAAG GTTGCTATAGTGCGATGTGTGTGGAGGCAAGGTCAAGGGAATGTTGCTATTGGTGTATTG ACGCCAAACATTTCATCAGTGAACAATATCCAAGATTCATTTTACTTCAATGTGCTCCCA TTTGCTGAGGACATCAGAGAGTTTCAGTTTCGGTCCTTCAGCAGCCTGCCATCATCATCT CAGCCCACTGAAGAACAACAAGAAGCTGCAGATAACCTAGTGAAGATGTTAGACCTAGCA CCACCTGGAAGAGAGGTCCTCAAGCCTGAGTTTACGCCAAATCCCATCTTGGAGAGATTT TACAGTTACCTTGATCTCAAGTCAAAGCAGCCAGATGCAAATGTCCCACCGCTTGAAAGA TCTCTAAGGAGGATAACCGAACCTGATCCTGATGTGGTTGGCCAACAAACACAATTAATC CAGAATTTAAGCAAAGCTTTTGTGCTGAAGGATAACCCCAAGAAAAAGAAAGCACGAACA CAGGACATGTTGGCATATACTGGTGCAGGTGATCAAGCTAAATCTGTAGAGGACAGAGTT CTGGAAAATACACATCCTTCAACAGAGAATGTTGTGGCAATCAGAGATTCAAATCCAGTT CAAGATTTTGAGGCCATGCTGGCTAAGAGATCTAGCTCAACATGGACTCAGAAGGCTATT GGAGATATGCAGAATTACATAGCAGCTTTGTTACAGAACTCCAGTGATGGGGGCAACTAT CAAAAAGCACTTGAATGTTTTGCTTCTCTGCGGAAGGCCTGTATTATTGAACAGGAACCA CAGGAATTCAACCAGTTCCTAACGAAGATTTACGAGAGATTGAAGGAAGGTGATGCTGCC AAGTTCTTTCAACTTCTCTCCTCAAAAAACATTTCACTTATCAACAAAGAGGAAGCGCCT GACAGTGATGTGACTGAAGAGATGGCAAGAAGTTTCTACCTGAAACGAGAAAAGGCGTCT CAGTAG

Peptide Sequence

PEP ID	Zm00001d034894_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:304956316:304965176:1 gene:Zm00001d034894 transcript:Zm00001d034894_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent DNA helicase 2 subunit KU80
Sequence	MARNREVVILLLDVGPSMHGVLLEVKNVCLTLVHKKLVYNRSDEVGIVLFGTKGTCNELA KDIGGYKHVTVIHDIKVVDEGTAQALQNLPLGSAPGDFLDSIVVGLDMVIRKFGITKGKR RLCLITGAQELLRDPPEGTKEDQVDTIANMLKKHNIKMECIIFREPGVHHNDVMEENDRL LHQFRNRSVAKVVQVDNPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTAEEK FPTLKKYSDKAPPNDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGYLYGPQVIPVSNAE WEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLAVSAIARAMHQMNK VAIVRCVWRQGQGNVAIGVLTPNISSVNNIQDSFYFNVLPFAEDIREFQFRSFSSLPSSS QPTEEQQEAADNLVKMLDLAPPGREVLKPEFTPNPILERFYSYLDLKSKQPDANVPPLER SLRRITEPDPDVVGQQTQLIQNLSKAFVLKDNPKKKKARTQDMLAYTGAGDQAKSVEDRV LENTHPSTENVVAIRDSNPVQDFEAMLAKRSSSTWTQKAIGDMQNYIAALLQNSSDGGNY QKALECFASLRKACIIEQEPQEFNQFLTKIYERLKEGDAAKFFQLLSSKNISLINKEEAP DSDVTEEMARSFYLKREKASQ

Transcript Sequence

Transcript ID	Zm00001d034894_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:304956316:304965176:1 gene:Zm00001d034894 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent DNA helicase 2 subunit KU80
Sequence	CTTCCTCCGCACTCCGCCGCGCCGGCCAGTCGTCTTGTCCCCCTCGCCGCCTCCGTGCTC GTCTTGCTCCTTCTCGGCTCCCCACCCCGCCACCTCGTCCCACCCCGCCCCTTGGGTTGA GTTGAGCTACTCAACCGTCAGTCAATTCCTGCACCTGGCGTTGGGCGGGTTTTCATGGGG GCAGCATAAAAGCCTCTTCGGTTCTTCCCCTAGCTCTGCCTCGCGGCAAGTCCCCCTCCG CTACGTTCGCCATGGCTCGCAACAGGGAAGTGGTGATTTTGCTGTTGGATGTTGGGCCTT CGATGCATGGAGTGCTGCTAGAGGTGAAGAACGTATGCTTGACTCTTGTGCATAAGAAGC TAGTTTATAACAGGAGCGATGAAGTTGGTATTGTCCTCTTTGGTACTAAAGGAACATGCA ATGAGCTTGCAAAGGACATTGGGGGCTATAAGCATGTGACGGTCATACATGATATTAAAG TTGTAGATGAAGGAACGGCACAGGCTCTGCAAAACCTTCCATTAGGATCTGCCCCTGGTG ATTTTCTGGATTCTATTGTTGTTGGCTTGGATATGGTGATTAGGAAATTTGGTATTACCA AAGGGAAGCGGCGGCTCTGTCTAATCACTGGTGCACAAGAACTGTTAAGAGATCCGCCTG AGGGGACCAAAGAAGATCAGGTGGACACCATTGCAAACATGTTGAAAAAACACAATATCA AGATGGAGTGCATTATTTTCAGAGAACCGGGAGTGCATCATAATGATGTAATGGAAGAAA ATGACCGACTATTGCATCAGTTCAGAAATAGATCAGTAGCAAAGGTAGTTCAGGTTGACA ACCCAACATCACTGTTGGGTGCTCTCAAGACAAGAAATGTGCTCCCAGTTACCGTTTTCA GGGGAGATCTGGAAGTGAACTCCAATTTTAAAATAAAGGTGTGGGTTTATAAGAAAACAG CTGAGGAAAAATTCCCCACTTTGAAGAAGTATTCGGACAAAGCTCCTCCAAATGATAAAT TTGCTTCTCATGAAGTCAAAGTTGATTATGAGTACAAGAGTGTTGTTGAGCCAGACAAAG TTGTTCCACCAGACCAAAGGATTAAGGGGTATCTCTATGGTCCTCAAGTTATTCCTGTAT CAAATGCTGAATGGGAGGCAGTCAAGTTCAAGCCAGAGAAAGGTGTGAAGCTTCTAGGAT TTACAGATAGATCCAGCGTACCACGGCACCAATTTATGAAAGATGTATGCCTGTTTATAC CTGAGCCAGGTAACATGAAAGCAAGTCTTGCAGTTTCTGCGATAGCAAGAGCAATGCATC AAATGAACAAGGTTGCTATAGTGCGATGTGTGTGGAGGCAAGGTCAAGGGAATGTTGCTA TTGGTGTATTGACGCCAAACATTTCATCAGTGAACAATATCCAAGATTCATTTTACTTCA ATGTGCTCCCATTTGCTGAGGACATCAGAGAGTTTCAGTTTCGGTCCTTCAGCAGCCTGC CATCATCATCTCAGCCCACTGAAGAACAACAAGAAGCTGCAGATAACCTAGTGAAGATGT TAGACCTAGCACCACCTGGAAGAGAGGTCCTCAAGCCTGAGTTTACGCCAAATCCCATCT TGGAGAGATTTTACAGTTACCTTGATCTCAAGTCAAAGCAGCCAGATGCAAATGTCCCAC CGCTTGAAAGATCTCTAAGGAGGATAACCGAACCTGATCCTGATGTGGTTGGCCAACAAA CACAATTAATCCAGAATTTAAGCAAAGCTTTTGTGCTGAAGGATAACCCCAAGAAAAAGA AAGCACGAACACAGGACATGTTGGCATATACTGGTGCAGGTGATCAAGCTAAATCTGTAG AGGACAGAGTTCTGGAAAATACACATCCTTCAACAGAGAATGTTGTGGCAATCAGAGATT CAAATCCAGTTCAAGATTTTGAGGCCATGCTGGCTAAGAGATCTAGCTCAACATGGACTC AGAAGGCTATTGGAGATATGCAGAATTACATAGCAGCTTTGTTACAGAACTCCAGTGATG GGGGCAACTATCAAAAAGCACTTGAATGTTTTGCTTCTCTGCGGAAGGCCTGTATTATTG AACAGGAACCACAGGAATTCAACCAGTTCCTAACGAAGATTTACGAGAGATTGAAGGAAG GTGATGCTGCCAAGTTCTTTCAACTTCTCTCCTCAAAAAACATTTCACTTATCAACAAAG AGGAAGCGCCTGACAGTGATGTGACTGAAGAGATGGCAAGAAGTTTCTACCTGAAACGAG AAAAGGCGTCTCAGTAGGAGCTGGAAGAAGCCGGTAACTCGAAGCGCCTTGGGTTTGGAG GGTATCTGCATGTTTTGAAACTGGGTATCTGGGTGGAACTGGAACTAATACTCAAACTCT CTGGGTTGAGTCACTGTTTTGCTGCACAATCTGCTGCCTACTACGTTTCGACTAGATTCA GCTTTGGGTACTACTGTATGTTGTTTGACTGGAGTAGCATGTCCATAGATCACATACTTC TGCAGTGTTCATTGGAGTGAATGCATGCATGCGGTGAAATGCAGCATGGATAGGTCTAGG AAGAAACATTACCATCATTTCCTAATGTTGGAGCGCTGCCTAGAAAAGGATCTTTTTCTG TAAGTGGTCTGGTGCGTCAAACCCTCCAAAGTCCAAAATAATCCTTTCTACATAACAAGT CCGATGTGTCATTGGACTGTACGATGAGCCAGGTTCGGTACACCATGGTACAACAGACTA ATTCTAAACTTGGGCTTCTTTTCTTTG