Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034886_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:304715056:304719918:1 gene:Zm00001d034886 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 5 description:Heat stress transcription factor A-1a
Sequence	ATGCAGGGCGGTGTCATGGCCCATGCCGCCGCCGCCGCGGCGGCCGCGTCGACGGTGACC ACGGCGGTGGCGCCCCCAGTCACGGCGCACGCGGTGGCGGTGGCGCCCCCGGTCACGGCG CACGCTGCGGCGGCGGCGGGCAACGGCAGCGCCACCGCCGCGCCGCCGCCACCGTTCCTC ATGAAGACCTACGAGGTGGTGGACGACCCGGCCACGGACGACGTCATATCCTGGGGCCCC GGGAACAACAGCTTCATCGTCTGGAACACGCCCGAGTTCGCCCGGGACCTCCTGCCCAAG TACTTCAAGCACAGCAACTTCTCCTCCTTCGTCAGGCAGCTCAACACCTACGGGTTTAGA AAGGTTGATCCAGACAGATGGGAATTTGCAAATGAGGGTTTTCTGAGAGGACAGAAGCAT CTGCTGAAGACTATCAACAGAAGGAAACCATCCTTGCAGGGGAACAGCCAACCACAGCAA CCTCAGTCGCAGAACGCTCCTGTGCCTTCCTGTGTAGAGGTTGGTAAGTTTGGGTTGGAG GAAGAGATTGAACGGCTGAAGAGGGATAAGAATGTTCTTATGCAAGAGCTTGTCAGGCTG AGACAGCAACAGCAAACAACTGACCATCAGCTGCAGACTTTGGGCAAGCGTCTTCAAGGG ATGGAGTCACGGCAGCAACAGATGATGTCTTTCCTGGCTAAAGCAATGCAAAGTCCTGGT TTCCTAGCGCAGTTTGTACAGCAAAATGAGAAGAGCAGAAGAAGAATAGTAGCGGCGAAC AAGAAAAGGCGGCTGCCCAGGCAAGATGGTGGCCTAGACTCCGAAAGTGCTGCTGCTTCG TTGGACGGTCAAATCATCAAGTATCAGCCTCTGATCAACGAAGCAGCCAAAGCAATGCTA AGGAAGATACTAAAGCTAGATTCTTCGCATAGGTTGGAATCTATGGGCAATTCAGAGAAT GGCAATTTTCTGCTGGAGAATTATATGCCAGGCGCTCAAGCCTTTGAGAGCTCTTCGTCA ACAAGAAACTCTGGGGTCACCCTTTCAGAGGTTTCAGCTAACCCAGGTTTGCCGTATGGC GGCGGCGGCGGCACGAGCTCTGGGCTGTCAGCCATCTGCCCTCCTGAAATCCAGTGCCCA GTTGTGATGGACAACATGTCGTCTAACCAAGTGCCCAGCATGAGTGCTGTGCCTCCTGTT TCGAAGGCTACAATTGACATGGGTATTCCTGAATTCTCAGCTCTGGCAGACTTGGTGAAT GAAGGCTCCGTCGATATCCCTGGAGGGGCCTTTGAGATGCCTGGTCCTGAGTTTCCTCTG CCAGAAGGCGATGACAGTGTCCCCATCGAGACCGATGAGACCATGTACAACAACAACGAC GAGACTCAGAGCCTTCCAGGCATCATCGACTCCTTCTGGGAGCAGTTCCTGGTAGGCAGC CCTCTCTCTGCCGATAACGATGAAGTTGATTCGGGGTCGCCACAGGAGAACGGATGGAGC AAAGTGGGGAACATCGGTGATCTTACAGAACAGATGGGCCTTCTGTCATCAACAAATCAC CGCGACTCAGGGAATGGGCTGTAG

Peptide Sequence

PEP ID	Zm00001d034886_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:304715056:304719918:1 gene:Zm00001d034886 transcript:Zm00001d034886_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 5 description:Heat stress transcription factor A-1a
Sequence	MQGGVMAHAAAAAAAASTVTTAVAPPVTAHAVAVAPPVTAHAAAAAGNGSATAAPPPPFL MKTYEVVDDPATDDVISWGPGNNSFIVWNTPEFARDLLPKYFKHSNFSSFVRQLNTYGFR KVDPDRWEFANEGFLRGQKHLLKTINRRKPSLQGNSQPQQPQSQNAPVPSCVEVGKFGLE EEIERLKRDKNVLMQELVRLRQQQQTTDHQLQTLGKRLQGMESRQQQMMSFLAKAMQSPG FLAQFVQQNEKSRRRIVAANKKRRLPRQDGGLDSESAAASLDGQIIKYQPLINEAAKAML RKILKLDSSHRLESMGNSENGNFLLENYMPGAQAFESSSSTRNSGVTLSEVSANPGLPYG GGGGTSSGLSAICPPEIQCPVVMDNMSSNQVPSMSAVPPVSKATIDMGIPEFSALADLVN EGSVDIPGGAFEMPGPEFPLPEGDDSVPIETDETMYNNNDETQSLPGIIDSFWEQFLVGS PLSADNDEVDSGSPQENGWSKVGNIGDLTEQMGLLSSTNHRDSGNGL

Transcript Sequence

Transcript ID	Zm00001d034886_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:304715056:304719918:1 gene:Zm00001d034886 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSF-transcription factor 5 description:Heat stress transcription factor A-1a
Sequence	TTTTCCAATTCCCCTTTCCTCTCAATCGCATACACCAGCGGCGGCGCCGGGACCCCGAAA ACCCTCTCCCCGCACACCACGGCCAACAGGAACCACTCCGCTCCTCCGAGCCCTAGCCGT CCCGGGCCGGGTCGGGCTCCCCTACATGACGCCGGCGTGAGGCAAGTGCTTAGTGGATCG CGCTGGTGGGAGGATGCAGGGCGGTGTCATGGCCCATGCCGCCGCCGCCGCGGCGGCCGC GTCGACGGTGACCACGGCGGTGGCGCCCCCAGTCACGGCGCACGCGGTGGCGGTGGCGCC CCCGGTCACGGCGCACGCTGCGGCGGCGGCGGGCAACGGCAGCGCCACCGCCGCGCCGCC GCCACCGTTCCTCATGAAGACCTACGAGGTGGTGGACGACCCGGCCACGGACGACGTCAT ATCCTGGGGCCCCGGGAACAACAGCTTCATCGTCTGGAACACGCCCGAGTTCGCCCGGGA CCTCCTGCCCAAGTACTTCAAGCACAGCAACTTCTCCTCCTTCGTCAGGCAGCTCAACAC CTACGGGTTTAGAAAGGTTGATCCAGACAGATGGGAATTTGCAAATGAGGGTTTTCTGAG AGGACAGAAGCATCTGCTGAAGACTATCAACAGAAGGAAACCATCCTTGCAGGGGAACAG CCAACCACAGCAACCTCAGTCGCAGAACGCTCCTGTGCCTTCCTGTGTAGAGGTTGGTAA GTTTGGGTTGGAGGAAGAGATTGAACGGCTGAAGAGGGATAAGAATGTTCTTATGCAAGA GCTTGTCAGGCTGAGACAGCAACAGCAAACAACTGACCATCAGCTGCAGACTTTGGGCAA GCGTCTTCAAGGGATGGAGTCACGGCAGCAACAGATGATGTCTTTCCTGGCTAAAGCAAT GCAAAGTCCTGGTTTCCTAGCGCAGTTTGTACAGCAAAATGAGAAGAGCAGAAGAAGAAT AGTAGCGGCGAACAAGAAAAGGCGGCTGCCCAGGCAAGATGGTGGCCTAGACTCCGAAAG TGCTGCTGCTTCGTTGGACGGTCAAATCATCAAGTATCAGCCTCTGATCAACGAAGCAGC CAAAGCAATGCTAAGGAAGATACTAAAGCTAGATTCTTCGCATAGGTTGGAATCTATGGG CAATTCAGAGAATGGCAATTTTCTGCTGGAGAATTATATGCCAGGCGCTCAAGCCTTTGA GAGCTCTTCGTCAACAAGAAACTCTGGGGTCACCCTTTCAGAGGTTTCAGCTAACCCAGG TTTGCCGTATGGCGGCGGCGGCGGCACGAGCTCTGGGCTGTCAGCCATCTGCCCTCCTGA AATCCAGTGCCCAGTTGTGATGGACAACATGTCGTCTAACCAAGTGCCCAGCATGAGTGC TGTGCCTCCTGTTTCGAAGGCTACAATTGACATGGGTATTCCTGAATTCTCAGCTCTGGC AGACTTGGTGAATGAAGGCTCCGTCGATATCCCTGGAGGGGCCTTTGAGATGCCTGGTCC TGAGTTTCCTCTGCCAGAAGGCGATGACAGTGTCCCCATCGAGACCGATGAGACCATGTA CAACAACAACGACGAGACTCAGAGCCTTCCAGGCATCATCGACTCCTTCTGGGAGCAGTT CCTGGTAGGCAGCCCTCTCTCTGCCGATAACGATGAAGTTGATTCGGGGTCGCCACAGGA GAACGGATGGAGCAAAGTGGGGAACATCGGTGATCTTACAGAACAGATGGGCCTTCTGTC ATCAACAAATCACCGCGACTCAGGGAATGGGCTGTAGTGTATCTTAATTAATATACGGTA GACTGGGATTATCGGTAATAAGCGTCGCCTGCAGTTTTTGTTATTTTTCCTTTTGGCCAA AAAATGATATGCCGGTATATCAACCACTCGCTCGACCTATATGCGCGGGAGGGGCAGTCT TCCAGCTGAGCTCTGAATGCCACAGCCACCTGCTTGTATCAATCTATGATGTTGGCAGTC TTGAGAACACCACTGTGACTTGTTAAATCTGTATGCTTATTCCCACTCTAGTTGCTG