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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034869_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:304307771:304308706:-1 gene:Zm00001d034869 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence

ATGGCGTTGCCCATTGAGCATTCCTCAAGGCCGACCCTGGGGTTTCCCTTGGGGACGGCC
CTCTTGCTCCTCGTGATCTTTGCCCTGAGTGGCATGTTCTCGTGCTGCTACCACTGGGAC
AAGCTCCGCTCCCTCCTCCGGTCTCGGCATCCAGGCATGTTCCAGGAGGGCACCTCCGTC
GCGTCCTCGCCGAGCAAGACGACCTGTGATCACAAGCTGGACAGAGCGTGTGGTTTGCCC
GTTATCATGCCTGGGGACAAGGTCCCCAGGTTCTTCGCGAGGCCCTGCCCTCACGAGACG
TCTTTGTGTTTGCCCCAAGCTGCAGAGAAGACGGCTGGAGTTCCGTCGGAGACCAGATCA
TGCATGAGCCGTCCGTCAGTATCTGTATAA

Peptide Sequence

PEP ID

Zm00001d034869_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:304307771:304308706:-1 gene:Zm00001d034869 transcript:Zm00001d034869_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence

MALPIEHSSRPTLGFPLGTALLLLVIFALSGMFSCCYHWDKLRSLLRSRHPGMFQEGTSV
ASSPSKTTCDHKLDRACGLPVIMPGDKVPRFFARPCPHETSLCLPQAAEKTAGVPSETRS
CMSRPSVSV

Transcript Sequence

Transcript ID

Zm00001d034869_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:304307771:304308706:-1 gene:Zm00001d034869 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence

CGTTTTCTCTGGTACCTAATAAGCATATATCCTTTGGGGACATACCTGAAACTTGTATCC
AGAAGGAGTGAATGGGGTAGCTTTCTTGCCACCTTTAGAAAGTCCATTTGATTATTTTCT
CTTGGACAGGACAGGCAGTGAGATGAGCTGCGTCAAGCAAGCACTGCCAGTGCCAGCAGC
AGATATAAGCAGAAGGCAGGTGATGCGAATGGCCGTCCGTCCATGGCGTTGCCCATTGAG
CATTCCTCAAGGCCGACCCTGGGGTTTCCCTTGGGGACGGCCCTCTTGCTCCTCGTGATC
TTTGCCCTGAGTGGCATGTTCTCGTGCTGCTACCACTGGGACAAGCTCCGCTCCCTCCTC
CGGTCTCGGCATCCAGGCATGTTCCAGGAGGGCACCTCCGTCGCGTCCTCGCCGAGCAAG
ACGACCTGTGATCACAAGCTGGACAGAGCGTGTGGTTTGCCCGTTATCATGCCTGGGGAC
AAGGTCCCCAGGTTCTTCGCGAGGCCCTGCCCTCACGAGACGTCTTTGTGTTTGCCCCAA
GCTGCAGAGAAGACGGCTGGAGTTCCGTCGGAGACCAGATCATGCATGAGCCGTCCGTCA
GTATCTGTATAAACACCTGCATGACGCAGTTAGCTGTTACGGTGACCGACTGTGTGTGTA
TATCATATGCTTTTGGTAATACAATACAAAGTGTGCAAACATTCCACTTGTGATATATAC
TATATACAAGATTTAGACAGTGTTAGGACTTATTCGTTTTGTTCTCAATCTATGTGTAAT
AGATGAGATTGAGTGAGTTTAAATTCTAAACAAGTCAAAA