Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034865_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:304197047:304201731:1 gene:Zm00001d034865 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence

ATGGCTGCGCAAGAAGAGAAGACCGCTGTTGTTGTTGCTGCTGCTGCCGATGTCGCGACA
GAGGAGCCTACGCCGGCGGCGGAGCAGCAACCTCAGCCGGCTGGGGCGGCGCGCAGGGCA
GGACCATCGGCGCCCGGCGGGGCTCCGCCCAACCCCTTCGACTTCTCCACCATGATGAAC
CTTCTCAATGACCCTAGCATCAAGGAGATGGCAGAGCAGATCGCCAAGGACCCGGCGTTC
ACGGAGATGGCGGAGCAGCTGCAGAAGACGGTGGTGTCCCCGCGGCAGCAACAGCAGCAG
CAGGCGCGGCAGCAGCAGCAGCAGCTGGACCCGCAGAAGTACGTGGCGACGATGCAGCAG
CTGATGCAGAACCCGCAGTTCGTGGCCATGGCGGAGCGGCTAGGCAGCGCGCTGATGCAG
GACCCTGCCATGTCCGCCATGCTGGGGGGCCTCACCAACCCGGCGCACAAGGAGCAGCTG
GAGGCCCGCGTCGCGCGCATGAAGGAGGACCCCACGCTCAAGCCCATCCTCGACGAGATC
GAGTCCGGCGGCCCCGCCGCCATGATGAAGTACTGGAACGACCCTGAGGCTCTGCAGAAG
TTCGGCCGCGCGATGGGCGTCGGCGTCGGCCCGTCCGGCGAGGCCGGCGGCGCAGAGCAC
GCCGAGGCGGAGGACGACGCCGGGGAGGAAGGCGAGTACGAGGACGAGTCCATCGTCCAC
CACACCGCCAGCGTTGGCGACGTCGAGGGCCTCAAGAAAGCGCTGGAGGACGGCGCGGAC
AAGGACGAGGAGGACTCGGAAGGGCGGCGTGGCCTCCACTTCGCGTGCGGCTACGGCGAG
CTCCAGTGCGCGCAGGCGCTCCTGGAGGCCGGCGCCGCGGTGGACGCCGTCGACAAGAAC
AAGAACACCGCGCTGCACTACGCCGCCGGATACGGCCGCAAGGACTGCGTCGCGCTCCTG
CTCGAGAGCGGCGCCGCCGTGACGCTGCAGAACCTGGACGGGAAGACGCCCATCGACGTG
GCCAAGCTCAACAACCAGGATGACGTCCTCAAGCTGCTGGAGAAGCACGCCTTCCTCCGC
CGCCAAAGCACCGTCTCCAGGTACCGTCCGCTTCCGCGGCGACGAGCCCGTGGAGACACC
CGCTACACCAGCAACGACGACACCCTCACCCTCGGCCTCGCGCGGCGGAGGCGCGACGCC
ACCGGCAACGCTGCTCTCCGCTGCCACGGTACCGTCGCGGAGCCCTCTACCCCGCCGTGG
CAGCGCGACGCCCAAGACGACGTGTGCTCGACGACCGGCCACGACCCCAGGCCGCAGCAC
GGCGCCGCGGCCGCTCGTGCCGTGCTCGATGACGACGAGACGCCTGGCGCTGACGCCTAC
GCCGCCATGGTCGCCAGCCGACTCAGGGAGCGCGACCTGACGCGCGCGGAGGCGCTCTTC
GGCGCGGCGCCCGCGGCTGCCCGGGGGCTGTATCTGGATACCGCCATGCTCGACGGGTAC
GCCAAGGCCGGCCGCGTCGATCGCGCGCGCGAGCTGTTCGACGCGATGCCGGTGAAGAAC
GTCGTCACTTGGACCTCTATGGTTTCCGGGTACTTCCGCGCCGGCCGCGTTCAGGAGGCG
CGGGAGCTGTTTGACGTCATGCCTGAACGGAATGACTATTCGTGGACGACGGTGGTGCAG
GGGTACGCGCGCAATGGGATGCTCAGGGAGGCGAGGGAGATGTTTGATCGGATGCCTCAG
AGGAATGTGGTCGCTTGGACGGCCATGGTTAAGGCCTACGTTGACTGTGGGCAGATTCAG
CAGGCGTGGGAATTGTTTGATATGATGCCTGAGAGGAACTCGTATTCCTGGAATGCCATG
ATTTCTGGTTTTCTCAGCATTGGGAAAGTGGCTGAAGCAGTTCAGTTGTTTGAGAGGATG
CCACACAGACACAAGAATGTGGTTTCTTGGACTACAATGGTCGCTGGCTTGGCAAATAAT
GGACTTGCTTGCAGGGCAAGAGAGTTCTTTGATCGGATGCCAGCGAAGGACACTGCGGCA
TGGAATGCCATTATCACCGTTTATGCCAACAATGGCCAGCTGAATGAGGCGCAGAGATTA
TTTGATTCAATGCTTGCAAAAGACCTGGTGACCTGGAGTACCATCATTGAGGCATATTCG
AAGAATGAGCGTAAGCATGAAGCCTTAAACATGTTTCTACTTATGCGCCATTCAGCAGTG
TCTCCTAACATTAGAACATTAATTAGTATCCTGGTTATATCTGAGAGCACAGTCGAAGTT
AAGCAAATTCACGGGTTGGTCATTGCACTTGGATTCCTGTCAGAAACTTCCTTAGGAAAT
GCTCTGCTCACAATGTATTCAAGAAGTGGAGATCTGATGTCTGCCTGGTTTGCCTTCAAA
AGGTTGGAACAGAAGGATGCCATAACATGGACGTCGATAGTGCAAGCTTTTGCAGACCAT
GGCTGTGGTTACCATGCCTTACTGGGGTTTGCTCAGATGCTGAGACATGGGTATAAACCA
AGTTCGACTACCTTCACTGCTGTGCTGTCTGCTTGTAGGCATGTGGGGTTGGTTGGGAAA
GGTCGCAAGATGTTTAAATCCATCTACCATGTTTATGGATTGGAACCAACCATTGAGCAC
TATTCTTGTCTTGTGGACCTTCTAGGTCGAGCAGGGTATGTAAGGGAAGCCAAGGAACTT
GTCGATGGTATGCAGCAGGGTATGCGCGATGAGGCCATTCTTGCGACGCTCCTGGGAGCC
TGTGTGGTGCATAATGAGGTAGAGGTAGCAAGAGAAGTGGGTGAGGATCTTGTCAGATTT
GACCCCTCTGGTACCGGAGGCTACAGGCTCCTGGCCAATGTATTTGCATCGCATGGAATG
TGGGATGAAACAGCAAATGTGTGGAAGGTCATGAGGGGCAGTAAGGCAAAGAGGACTCCT
GGTTTTAGTCAGATTGAGGTGAACATGAGGAATCATGTGTTCTACTCAAGGGATCAAGAG
CATCCACAATGTGCTGAAATATATGAGATGCTGATTGACACAATTGCTCCTCAGATGAAG
GGTTCATCATGCGTGGGACTCTGGGAACTGACCCTCTTGTCCGATCCACGCGAATCGACT
GCCTGGTGA

Peptide Sequence

PEP ID

Zm00001d034865_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:304197047:304201731:1 gene:Zm00001d034865 transcript:Zm00001d034865_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence

MAAQEEKTAVVVAAAADVATEEPTPAAEQQPQPAGAARRAGPSAPGGAPPNPFDFSTMMN
LLNDPSIKEMAEQIAKDPAFTEMAEQLQKTVVSPRQQQQQQARQQQQQLDPQKYVATMQQ
LMQNPQFVAMAERLGSALMQDPAMSAMLGGLTNPAHKEQLEARVARMKEDPTLKPILDEI
ESGGPAAMMKYWNDPEALQKFGRAMGVGVGPSGEAGGAEHAEAEDDAGEEGEYEDESIVH
HTASVGDVEGLKKALEDGADKDEEDSEGRRGLHFACGYGELQCAQALLEAGAAVDAVDKN
KNTALHYAAGYGRKDCVALLLESGAAVTLQNLDGKTPIDVAKLNNQDDVLKLLEKHAFLR
RQSTVSRYRPLPRRRARGDTRYTSNDDTLTLGLARRRRDATGNAALRCHGTVAEPSTPPW
QRDAQDDVCSTTGHDPRPQHGAAAARAVLDDDETPGADAYAAMVASRLRERDLTRAEALF
GAAPAAARGLYLDTAMLDGYAKAGRVDRARELFDAMPVKNVVTWTSMVSGYFRAGRVQEA
RELFDVMPERNDYSWTTVVQGYARNGMLREAREMFDRMPQRNVVAWTAMVKAYVDCGQIQ
QAWELFDMMPERNSYSWNAMISGFLSIGKVAEAVQLFERMPHRHKNVVSWTTMVAGLANN
GLACRAREFFDRMPAKDTAAWNAIITVYANNGQLNEAQRLFDSMLAKDLVTWSTIIEAYS
KNERKHEALNMFLLMRHSAVSPNIRTLISILVISESTVEVKQIHGLVIALGFLSETSLGN
ALLTMYSRSGDLMSAWFAFKRLEQKDAITWTSIVQAFADHGCGYHALLGFAQMLRHGYKP
SSTTFTAVLSACRHVGLVGKGRKMFKSIYHVYGLEPTIEHYSCLVDLLGRAGYVREAKEL
VDGMQQGMRDEAILATLLGACVVHNEVEVAREVGEDLVRFDPSGTGGYRLLANVFASHGM
WDETANVWKVMRGSKAKRTPGFSQIEVNMRNHVFYSRDQEHPQCAEIYEMLIDTIAPQMK
GSSCVGLWELTLLSDPRESTAW

Transcript Sequence

Transcript ID

Zm00001d034865_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:304197047:304201731:1 gene:Zm00001d034865 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence

GGGCGTCTCTGGTCGGTCGCTTTCCCTCCTCAGCTTCAGCCTTCAGCTCCTCTCCTTTCC
TCTCCTCTCCTCTCCTCTCCTCTCCACAGCTGCAGCCAGAGCCACCCACCTTATCGTCAT
CCTCGCTCGCTCCTCATCGCCAGCGCCTCCTCCTCCTCCTCCTTCTTCCCCACCGCTGCC
GACATGGCTGCGCAAGAAGAGAAGACCGCTGTTGTTGTTGCTGCTGCTGCCGATGTCGCG
ACAGAGGAGCCTACGCCGGCGGCGGAGCAGCAACCTCAGCCGGCTGGGGCGGCGCGCAGG
GCAGGACCATCGGCGCCCGGCGGGGCTCCGCCCAACCCCTTCGACTTCTCCACCATGATG
AACCTTCTCAATGACCCTAGCATCAAGGAGATGGCAGAGCAGATCGCCAAGGACCCGGCG
TTCACGGAGATGGCGGAGCAGCTGCAGAAGACGGTGGTGTCCCCGCGGCAGCAACAGCAG
CAGCAGGCGCGGCAGCAGCAGCAGCAGCTGGACCCGCAGAAGTACGTGGCGACGATGCAG
CAGCTGATGCAGAACCCGCAGTTCGTGGCCATGGCGGAGCGGCTAGGCAGCGCGCTGATG
CAGGACCCTGCCATGTCCGCCATGCTGGGGGGCCTCACCAACCCGGCGCACAAGGAGCAG
CTGGAGGCCCGCGTCGCGCGCATGAAGGAGGACCCCACGCTCAAGCCCATCCTCGACGAG
ATCGAGTCCGGCGGCCCCGCCGCCATGATGAAGTACTGGAACGACCCTGAGGCTCTGCAG
AAGTTCGGCCGCGCGATGGGCGTCGGCGTCGGCCCGTCCGGCGAGGCCGGCGGCGCAGAG
CACGCCGAGGCGGAGGACGACGCCGGGGAGGAAGGCGAGTACGAGGACGAGTCCATCGTC
CACCACACCGCCAGCGTTGGCGACGTCGAGGGCCTCAAGAAAGCGCTGGAGGACGGCGCG
GACAAGGACGAGGAGGACTCGGAAGGGCGGCGTGGCCTCCACTTCGCGTGCGGCTACGGC
GAGCTCCAGTGCGCGCAGGCGCTCCTGGAGGCCGGCGCCGCGGTGGACGCCGTCGACAAG
AACAAGAACACCGCGCTGCACTACGCCGCCGGATACGGCCGCAAGGACTGCGTCGCGCTC
CTGCTCGAGAGCGGCGCCGCCGTGACGCTGCAGAACCTGGACGGGAAGACGCCCATCGAC
GTGGCCAAGCTCAACAACCAGGATGACGTCCTCAAGCTGCTGGAGAAGCACGCCTTCCTC
CGCCGCCAAAGCACCGTCTCCAGGTACCGTCCGCTTCCGCGGCGACGAGCCCGTGGAGAC
ACCCGCTACACCAGCAACGACGACACCCTCACCCTCGGCCTCGCGCGGCGGAGGCGCGAC
GCCACCGGCAACGCTGCTCTCCGCTGCCACGGTACCGTCGCGGAGCCCTCTACCCCGCCG
TGGCAGCGCGACGCCCAAGACGACGTGTGCTCGACGACCGGCCACGACCCCAGGCCGCAG
CACGGCGCCGCGGCCGCTCGTGCCGTGCTCGATGACGACGAGACGCCTGGCGCTGACGCC
TACGCCGCCATGGTCGCCAGCCGACTCAGGGAGCGCGACCTGACGCGCGCGGAGGCGCTC
TTCGGCGCGGCGCCCGCGGCTGCCCGGGGGCTGTATCTGGATACCGCCATGCTCGACGGG
TACGCCAAGGCCGGCCGCGTCGATCGCGCGCGCGAGCTGTTCGACGCGATGCCGGTGAAG
AACGTCGTCACTTGGACCTCTATGGTTTCCGGGTACTTCCGCGCCGGCCGCGTTCAGGAG
GCGCGGGAGCTGTTTGACGTCATGCCTGAACGGAATGACTATTCGTGGACGACGGTGGTG
CAGGGGTACGCGCGCAATGGGATGCTCAGGGAGGCGAGGGAGATGTTTGATCGGATGCCT
CAGAGGAATGTGGTCGCTTGGACGGCCATGGTTAAGGCCTACGTTGACTGTGGGCAGATT
CAGCAGGCGTGGGAATTGTTTGATATGATGCCTGAGAGGAACTCGTATTCCTGGAATGCC
ATGATTTCTGGTTTTCTCAGCATTGGGAAAGTGGCTGAAGCAGTTCAGTTGTTTGAGAGG
ATGCCACACAGACACAAGAATGTGGTTTCTTGGACTACAATGGTCGCTGGCTTGGCAAAT
AATGGACTTGCTTGCAGGGCAAGAGAGTTCTTTGATCGGATGCCAGCGAAGGACACTGCG
GCATGGAATGCCATTATCACCGTTTATGCCAACAATGGCCAGCTGAATGAGGCGCAGAGA
TTATTTGATTCAATGCTTGCAAAAGACCTGGTGACCTGGAGTACCATCATTGAGGCATAT
TCGAAGAATGAGCGTAAGCATGAAGCCTTAAACATGTTTCTACTTATGCGCCATTCAGCA
GTGTCTCCTAACATTAGAACATTAATTAGTATCCTGGTTATATCTGAGAGCACAGTCGAA
GTTAAGCAAATTCACGGGTTGGTCATTGCACTTGGATTCCTGTCAGAAACTTCCTTAGGA
AATGCTCTGCTCACAATGTATTCAAGAAGTGGAGATCTGATGTCTGCCTGGTTTGCCTTC
AAAAGGTTGGAACAGAAGGATGCCATAACATGGACGTCGATAGTGCAAGCTTTTGCAGAC
CATGGCTGTGGTTACCATGCCTTACTGGGGTTTGCTCAGATGCTGAGACATGGGTATAAA
CCAAGTTCGACTACCTTCACTGCTGTGCTGTCTGCTTGTAGGCATGTGGGGTTGGTTGGG
AAAGGTCGCAAGATGTTTAAATCCATCTACCATGTTTATGGATTGGAACCAACCATTGAG
CACTATTCTTGTCTTGTGGACCTTCTAGGTCGAGCAGGGTATGTAAGGGAAGCCAAGGAA
CTTGTCGATGGTATGCAGCAGGGTATGCGCGATGAGGCCATTCTTGCGACGCTCCTGGGA
GCCTGTGTGGTGCATAATGAGGTAGAGGTAGCAAGAGAAGTGGGTGAGGATCTTGTCAGA
TTTGACCCCTCTGGTACCGGAGGCTACAGGCTCCTGGCCAATGTATTTGCATCGCATGGA
ATGTGGGATGAAACAGCAAATGTGTGGAAGGTCATGAGGGGCAGTAAGGCAAAGAGGACT
CCTGGTTTTAGTCAGATTGAGGTGAACATGAGGAATCATGTGTTCTACTCAAGGGATCAA
GAGCATCCACAATGTGCTGAAATATATGAGATGCTGATTGACACAATTGCTCCTCAGATG
AAGGGTTCATCATGCGTGGGACTCTGGGAACTGACCCTCTTGTCCGATCCACGCGAATCG
ACTGCCTGGTGA