Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034835_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:303405801:303411247:1 gene:Zm00001d034835 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA binding protein
Sequence

ATGGAGACTGAAAGGTCCGCGCATAATAAAGTGCATATTCAGTCTGGTAATGCTTCAAGG
AAAACTGAGGGATTTATACAACAGAGCATCAATGCCAATCGACAAAAGAATGGGACATCA
GTACAACATTCTGAAAGCTTCACCACTTCTGCTCGAAGAACTGCTGGTGGCTTTCCACCA
GCACCTACAACGGAGGATAAATTCAAAGCTGCAAGGCTTTCATCCAGTAATGAAGCTGCA
CCCAGAAAAGAGGGGGTTGGACAGCGAATCAGTAACATTAGCATATCGCTTCAAAAGAGA
ACTGAGAACACAAACAAAGATGTCGCGAAGAAAGAAGTTGGCACCTCCTCTCCATTGCCT
CCAAATCCTGCTAATGCTATGCATAAGGGAAATGGCAAGGTTGGTAGGCCAATGGACAAC
ACACAAGGATCCATGCAGAGATTTGGCAGCCCATCAACATCAAGTGCAACATGGGGGATG
GATAGAGGAGCACCTAGGTCATCCATCCCAAGCCCGAGCATTACAATACGGAGACCGAAT
GGCATGGTACGACCAGCTGAAAATCTTTCTGTCTCTGCTAAGAAACCTGATGCAGGAGGC
CTTTCACCTGCTATGGGTAAGGAAAAGGAACAAGGTGGAAGGTTGCTGCAAGCTAATATT
TCAACTGATCAGAAACTGGCAGCTGAAAGTCGTTCTGCCTCTGCTAAGAAACCTGATGCA
GGAGGCCTTTCACCTGCTATGGGTAAGGAAAAGGAACAAGGTGGAAGATTGCTGCAAGCT
AATATTTCAACTGATCAGAAACTGGCAGCTGAAAGTCGTTCTGTCTCTGCTAAGAAACCT
GATGCAGGAGGCCTTTCACCTGCTATGGGTAAGGAAAAGGAACAGGGTGGAAGGTTGCTG
CAAGGTAATATTTCAACTGATCAGAAACTGGGAGCTGAAAACCGTTCTGTCTCTGCTAAG
AAACCTGATGCAGGAGGCCTTTCACCTGCTATGGGCAAGGAAAAGGAACAAGGTGGAAGG
TTGCTGCAGGCTAATATTTCAACTGATCAGAAACTGGTTATGTCAAAGCCTCCAGCTGTG
GAGAAAGCTGCAGATGGGAGAGCTGAAAGGATGGAGAAGGTCAGAGATGGGGCACCAGAT
ATTGCCAAGAAAGAGGACAAAAAGAGTGATCGGCATGAGAAAAAGAAAAGGAAAGAGAAA
GATAAACACAAAGAGAAGAAAAAGGAGAAAGAGGCAAAGAAGGAGAAAAGGGAACATAAC
CACAAAGAGCATAATAAAACAAGAGAAAACAGTATAAGTTATCCCATAGATAGTCTTAAC
TTGAAGCACTCGGTCCCTCCTTTAGCCCCACCAGTTGATGATGGAAAATCTGTTGTGCCT
GATGAGAACCTGAAGAAGCGAAAGAACCATGAAACGAATGGTTACTTTTCTTTTTTTCTT
TTGCACTTAACAGCATGCGAGTCTTGTATGACACCATTATCCTTTTTTATGGTGCTTTAT
ATTATAAGACTTCTGATGCTGCTGTACAGACAACCTTGA

Peptide Sequence

PEP ID

Zm00001d034835_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:303405801:303411247:1 gene:Zm00001d034835 transcript:Zm00001d034835_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA binding protein
Sequence

METERSAHNKVHIQSGNASRKTEGFIQQSINANRQKNGTSVQHSESFTTSARRTAGGFPP
APTTEDKFKAARLSSSNEAAPRKEGVGQRISNISISLQKRTENTNKDVAKKEVGTSSPLP
PNPANAMHKGNGKVGRPMDNTQGSMQRFGSPSTSSATWGMDRGAPRSSIPSPSITIRRPN
GMVRPAENLSVSAKKPDAGGLSPAMGKEKEQGGRLLQANISTDQKLAAESRSASAKKPDA
GGLSPAMGKEKEQGGRLLQANISTDQKLAAESRSVSAKKPDAGGLSPAMGKEKEQGGRLL
QGNISTDQKLGAENRSVSAKKPDAGGLSPAMGKEKEQGGRLLQANISTDQKLVMSKPPAV
EKAADGRAERMEKVRDGAPDIAKKEDKKSDRHEKKKRKEKDKHKEKKKEKEAKKEKREHN
HKEHNKTRENSISYPIDSLNLKHSVPPLAPPVDDGKSVVPDENLKKRKNHETNGYFSFFL
LHLTACESCMTPLSFFMVLYIIRLLMLLYRQP

Transcript Sequence

Transcript ID

Zm00001d034835_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:303405801:303411247:1 gene:Zm00001d034835 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA binding protein
Sequence

TGGATCCCCCCGCGCGCGGAGGGGAATTCGGCGCCCAGATCCCCGCGATTCCGGCGCCGG
CGCCGGGCATGAGAGGCCGTAGGGCATGCCTGTGGTGGTGGCCCCTGGCGCGGGACGAGT
GAGCCGGCGGCGGGAGGACGAGGAACAGGACCTGTGGCTGAGGCTGAGGCCTGAGAGGAG
CAGTCGTCAAGTAGGAGGAGGAGGAGGTCGGGGTGGGTGATCCGAGGCCCGAGGCGGCCG
TGCCATGTCTCGCTGCTTCCCGTTTCCGCCACCACGATATGAGAAGACCGTGCGCCCCGA
CGCCCAGCTAGCCTCGCAGCAGCAGCAGCTTGACAAGGTGGAACAACACCCCCACCCCAC
CCCGCACCCTGCCTTACTGATCGATCGCCTCGTCGTCCACTCGTGCTAGGTGCTACTGAC
TATCTCATATAGGATAGGAATAGGATGGACTGACTTGGACGCATTAGGCCTGTACTTACA
TGCTATTATCCCCCCAAGTCTCAGCTTAGCTGGCATTCAATTGGGAGAAATAAGGAGCTA
GACCAGGCTGGTTAGGGTTCCTGTCTGAGAAATTCTAGCAGCGTTTTAGCTCCCGTAGCT
GAGATCGCGGGCGTTACAGGATCCATAAGGCGTTCTATGTCGCATCCTTTCCGGTTTGCC
GGTTGGGGGGCAAACTAGAACTAGGAAAGTGTTAAGTCTTGCTGAATCAGTATTTACTCC
TTTCCAGAGTTCGCGGAAGCCGGTCAGGGCCTCCGACTTTAATAGCAATAGGCGTTATAG
TAGGACGCACAATGCGTTACTTTGGGGATCCTTTGTGTGGCTGGTTCAGTGATTGAGATA
GATTTGGAAAGAGTTTGTTTTGCTGAATTGTTATTCAATACTTCACTAAGGCGTGTCCCT
GTTTACATGAAATGCATATGTCACAAATTCCGAACATTTTTTGGGGTTATTCGTTAGGTT
GATATTGCAGGTTAGATTTTAGTGCAATTATCATGGCAACAGAATTCGCTTTTGAAAGGC
AGCTTAATATGATTACCAAGGCTAAAAAATTGTCTACGTGTGTACAAACTAGAATGTGAA
TAATTGTTATAGTCAGATGTCGTTTCTGGTAGCTACCAACTGTGGGAAAAAAATGTTCAA
GCCATCAATAGAGAGTAGACCACCTTGCATCGATATCTTTTCATCTATAGTTGAAGGCAA
ACACGAAGAGTTAGATTGGTTAGTCTGTTTGTGTTCTACTATTGTCATTTCATGATTCAT
GACATGGTGGGATATGCTTTAGATATTTAATCAGCATATTTCCTGTTTTGGACTTGTTAT
CTGTCCTTATCCTTATATGAAATCAGTGCCAGGGCACCATAGAGGGTACCATGAAATTGC
TGGTGTCATACTACATTCCAAATGAATAATGGCTGCATACAGCCCAGTAGCTACTTTGTT
TGCTGTATTCATTGGCTTGGGGGTCCTTATATCATTGTTCTTGGCAACTCAAGTTATGTA
TCCCATTCTTTTTGCTGTGTTTTGGACTCCACATGATCAATTTTTTGTGTCTTCTGACAG
TTGATTATAATTAAATGACAAACTAAAAATATGGCCTGAAACAGTACATTTTGGATTGCC
AGTGCCTAATACCAAGTTTTAACAAGATTAACAATGCAAAATTGCTCCCTCGGACAATAC
TGGAATCTATGAACCTGATACTAGTGCAAGAAAATTCAGAAATGTTGTTACACGACAGTA
CCATGTAACTTAAATATTGTAGGCCTGTAGCACTTGTTAGGGCTAGTTTAGAAACTCAAA
TCCTCTTCGGGATTGAAGGGGATTGGAGAGGAAATTAGTTCATTTCCACCTCAATCCCCT
CCAATCCCAAATGGGATTTGAGGTTCCCAAAGTAGCCCTTAAGATGGATAAGTTTTGCCT
GGAGCTTTGTGTTGTTATAGAAGTTTTATTGATCATGTTTACTATGAGTAGGTTTGGCTG
TAGGCTCTAGCCAATGCAGAAAAAAAAAGATGTATAAAAGTGTGATGGTTTAGGCTTTTT
AACCGATCACTATTGTTTGGTGAAATTGATTGCATGATTTTCGGACATCCCATGGCCTGT
CTAATCCTTCCATGCATATGGATGCAGCCTAATAAAAATTTGCACAGGTTAACCTAATTT
GTGGTTACTATTGAAGACATTAACTTGAGAGCGCATAAAGTACTAATAGGCTAATAACTA
TCTTGTTCCTTTCATAGTTCATAGGTCAAAGTTGTAGTTGGAAAACCAGCTATCTCCTAA
TTTATTTCCAGTTTTTGTGAATTTGGTTCAAATGTAGCATGTCCCTTGCACATATGAGAA
GGTAGATGTCCTAATAGGGTGTCAATGTAGTTCAGTGATCTGTATTGCATATTGCCTATA
CTTTGCACCTTGCAGATTTGTTGTACCATGGATACAACTTTATTTGCAGTTAATAACTTG
TCATTCAGTATGCTTTTAGGCAGTGTGGCCTTGAATAGTTGTGCAAATGGAGTATTGATG
TCACCGTTCACCCTAAAACATCACTGTTCATCGTTTTGTACATTTTAGTTAATGGTTATT
TTATGTACTGTATTTCACTAAGGCTTGCTCCTGGCCTTTATTTTTTACTCATTTGCTAGT
TTTTTTTTTCTGTAACTGGCGTTTACTTGACTTGAAACAACGTTGTCATCTCAGGAGAAA
CACAAAGAGAAGAAACATAAGAAGGACAAGAAGGACAAAGATAGAAAGGAAGGTAAAGAA
AAGAAGGATAAAGACAGGAGTAGGGATAAGCACAAAGATAAGAAAGATCGTAAAGAAAAA
CACAAAGACGAGAAAAAAGACAAGAGCAAAGATAAAAACAGGGAGTCAGGCGAAGGAATT
CAAAGAAATGACGAGGCTCTCCATGGTCAGAAGGTTGGAGAGAGCAGCAGGGGGTCTGAA
GAAATTAAGGATCTTAAATTCAGGGAGGAGTTGGTCAGAGGAGTACAGGATGAGAAAGGG
GCAGCGAGTCAAACTATTGAAAATTATGCTGTTTCAAATGATCGAAATCGCAAAGGCTTC
ATTGCTTCACCTGCAATGGAGACTGAAAGGTCCGCGCATAATAAAGTGCATATTCAGTCT
GGTAATGCTTCAAGGAAAACTGAGGGATTTATACAACAGAGCATCAATGCCAATCGACAA
AAGAATGGGACATCAGTACAACATTCTGAAAGCTTCACCACTTCTGCTCGAAGAACTGCT
GGTGGCTTTCCACCAGCACCTACAACGGAGGATAAATTCAAAGCTGCAAGGCTTTCATCC
AGTAATGAAGCTGCACCCAGAAAAGAGGGGGTTGGACAGCGAATCAGTAACATTAGCATA
TCGCTTCAAAAGAGAACTGAGAACACAAACAAAGATGTCGCGAAGAAAGAAGTTGGCACC
TCCTCTCCATTGCCTCCAAATCCTGCTAATGCTATGCATAAGGGAAATGGCAAGGTTGGT
AGGCCAATGGACAACACACAAGGATCCATGCAGAGATTTGGCAGCCCATCAACATCAAGT
GCAACATGGGGGATGGATAGAGGAGCACCTAGGTCATCCATCCCAAGCCCGAGCATTACA
ATACGGAGACCGAATGGCATGGTACGACCAGCTGAAAATCTTTCTGTCTCTGCTAAGAAA
CCTGATGCAGGAGGCCTTTCACCTGCTATGGGTAAGGAAAAGGAACAAGGTGGAAGGTTG
CTGCAAGCTAATATTTCAACTGATCAGAAACTGGCAGCTGAAAGTCGTTCTGCCTCTGCT
AAGAAACCTGATGCAGGAGGCCTTTCACCTGCTATGGGTAAGGAAAAGGAACAAGGTGGA
AGATTGCTGCAAGCTAATATTTCAACTGATCAGAAACTGGCAGCTGAAAGTCGTTCTGTC
TCTGCTAAGAAACCTGATGCAGGAGGCCTTTCACCTGCTATGGGTAAGGAAAAGGAACAG
GGTGGAAGGTTGCTGCAAGGTAATATTTCAACTGATCAGAAACTGGGAGCTGAAAACCGT
TCTGTCTCTGCTAAGAAACCTGATGCAGGAGGCCTTTCACCTGCTATGGGCAAGGAAAAG
GAACAAGGTGGAAGGTTGCTGCAGGCTAATATTTCAACTGATCAGAAACTGGTTATGTCA
AAGCCTCCAGCTGTGGAGAAAGCTGCAGATGGGAGAGCTGAAAGGATGGAGAAGGTCAGA
GATGGGGCACCAGATATTGCCAAGAAAGAGGACAAAAAGAGTGATCGGCATGAGAAAAAG
AAAAGGAAAGAGAAAGATAAACACAAAGAGAAGAAAAAGGAGAAAGAGGCAAAGAAGGAG
AAAAGGGAACATAACCACAAAGAGCATAATAAAACAAGAGAAAACAGTATAAGTTATCCC
ATAGATAGTCTTAACTTGAAGCACTCGGTCCCTCCTTTAGCCCCACCAGTTGATGATGGA
AAATCTGTTGTGCCTGATGAGAACCTGAAGAAGCGAAAGAACCATGAAACGAATGGTTAC
TTTTCTTTTTTTCTTTTGCACTTAACAGCATGCGAGTCTTGTATGACACCATTATCCTTT
TTTATGGTGCTTTATATTATAAGACTTCTGATGCTGCTGTACAGACAACCTTGATATGCG
GCCTACAAAGTTGCCGAGACCAGCACTCCCCAGCAATCGTGTGGAGAATGGTACAGCATC
TCATGTAGCCGCGCCACTCTCTTCTGTGAAGCAGGAAGCCATAAATATTGAAAAGGCTGA
AAGGCTCCACAAGGAAGAGAAGGTCAATGGCAACCAACAGGGTCAGCAGCGAGGTCCAGT
CGATCCGGTGGCTGCTTATGAGAATGGCACAAGCTCTAGGAAGCCACCTCACCCCGACTG
CAAGTATCTTAGCCAGATATACAGCATTCCTGAAGCACCTCAAATGATGGAATTGCCTGG
GCAGGAAGGTGAGGACTGGCTGTTCGACAAAGGCGGCACCCAGCCAAGGAAGCCGGCCAG
TTCAGCGCCTGAGGCTGATGGAGTCCCCCAAGTGTGGGCTCAGGCTCTGAAAATTGACCA
TGCTGATGTCATTGCTCTGCCATACGTGATACCCTTTTAGCTGAGTGACAATCACCTGTG
AAGCTGAGACATCAATGAACAACAGCAACTTTGTGTGGCTGGGATGTGTTGCCAGCTTTT
ACAAGTAGCTTGTGTGGCATAGATAGATAGCTTCATGCACCACTCCCTTTGCCGTGGGCG
TGCTGCGTGGAAAGTCGAACAAACAGTGTTGGCTGCCAGGAGGCTGGGATCTGTAATGGA
GTTGGTTAGGTGTTATCGCTGCACAATTTTGATCTGTTGAGGTGTAATAACATTTTTAAT
ACCAAAGATGTACATTAGAGAGAGGAGGGAGAGGGAAAAGACTTGAGATTCTTCTTCATT
TATTACAGTAGTTGGATGGATTTGAGC