Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034832_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:1:303279393:303289233:-1 gene:Zm00001d034832 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable acyl-activating enzyme 16 chloroplastic
Sequence

ATGCGACCACCACGTCCTGGCGAAGGCCACGAGGCCGCCCGACGCGACACGGCCACCTCA
GCTCACCTGTCCTGTCCCTCACCAATGCCGGGCGTCGTCGCTCTCTACCGGTCCCGGCTC
CCTATATACTCGAGCCGAGCGAGCGAGGCAAACGAGATGAGCCTCTGGATCGCCGGCACA
GGCGCGATGCTCGCCGCCTCCGCCTCGTCCGGTCAGATGGCCGGCCTCTGCGTCCCGCGC
CGCTCACCCACTCCTCCGCTCCTCGCCCGTCGCGGCCGCGGCCGCGGCCGATTGCTTCCT
CGTCGCCCGGCCACGCTACTCCGCCGCGACCTCCGCCCCGCCGCCGCCGCGTCTCCGCCG
CCCCAGTCCGCCGGCTCCGCGATAGAACATCAAGTACGTAAAAAGTGCTCACCTCTACTG
GAGAGTGCTCTGCTGCCTGGTGGAAGTGATTCGACTCTGCATGAATGGAAGGCTGTTCCA
GATATTTGGAGGACAGCAGCAGAAAAATATGCTGACCTCGTAGCTGTGGTAGATCCTTAC
CATGAACCGCCAACGGAATGGACGTATACACAGCTTGAGCAAGAAATATTGGATTTTTCT
CAAGGTCTAAGGGCCATTGGTGTTGCTCCGGATGAAAAGCTAGCACTTTTTGCTGATAAC
TCATGTCGTTGGCTAGTTGCAGATCAAGGAATCATGGCAACCGGTGCTATAAATGTTGTT
AGGGGAACAAGATCATCTGATGAAGAATTGTTTCAAATATACACTCATTCAGAAAGCATT
GCACTTGTTGTGGACAGTCCTCAATTCTTTAACCGGCTTGCAGAGTCTTTCATGTCAAGG
ATTAATACAAGATTCATTGTTCTTCTTTGGGGTGACAAATCATGCATAGATAGCCAAGCT
ATTAAGGATATACCACTTTATGGATACAAGGATATCATCGAACTTGGTCGAGAAAGCCGC
AATGCACTGTTTCTTTCCGACGAGCAAGGTCAGCAAGATGTCTTTGAATCTATTAGTCCT
GAAGATGTGGCCACACTAATATATACTAGTGGAACAAGTGGCACACCAAAAGGCGTAATG
CTTACCCACCGAAATCTCTTGCATCAGATAAATAATCTGTGGGAGATTGTACCAGCAGAA
CCTGGTGATAGGTTCCTAAGCATGCTTCCAACATGGCATGCATATGAGCGTGCTTGTGAG
TACTTCATCTTCTCGTATGGTATCCAGCAAGTTTACACTACTGTTAAGTACCTGAAGGAA
GATTTGCAGCGTTACCAGCCTCAATATATTATATCAGTACCACTGGTCTACGAAACTCTG
TACATTTCAATTCATAGGCAGATTTCATCCAGTTCTGCTGCTCGAAAAATTATTGCTCTT
TCACTTATCAAGATAAGTTTCCTATATATGGAGGCAAAGAAGATCTATGAGGGAACAGTT
TTATCAAACAATCTTGTCAAACCATCAGTCATCGCCTATATGATGAAGTGGCTGTGGGCA
AGATTGGTTGCTGCATTTCTTTGGCCTTTACATAATCTGGCGAAGATTCTAGTATACAAG
AAAATTCATTCAGCAATCGGGATTTCAAAGGCTGGTATTAGTGGCGGTGGAAGTCTTCCG
ATGCATGTTGATAAGTTTTTTGAGGCCATTGGCATTAAAGTACAAAACGGCTATGGCCTT
ACTGAGACTTCTCCTGTTGTTGCTGCTAGACGACCATTCTGTAATGTTCTTGGGACAGTT
GGTCACCCAATAAAGCATACTGAAATCAAGATTTTTGACATTGAGACTGGTGAGGTCCTT
CCAGATGGTTCAAAGGGGATTGTGAAAATTAAAGGACCACAAGTAATGAAGGGATACTAT
AAGAACCCATCGGCTACAAATGAAGCTTTTGATCAAGAGGGTTGGTTCAGCACTGGAGAT
GTAGGTTGGATAGTACCTCATCATGCCATGGGGCCAAGTCGCCAGTGTGGAGGGATGATT
GTTCTTGAAGGGCGTGCAAAGGATACAATAGTCCTATCTACAGGTGAAAATGTTGAACCT
GCTGAGATCGAGGAAGCAGCCAGCAGGAGTACCTTGATTAATCAGATAGTTGTGATCGGG
CAGGATCAACGGCGTCTTGGTGCCATAATTGTTCCCAACAATGATGAAGTTCTGGCAGAA
GCAAAAAGGAAGTCCATCCTTGGTGAGGATGGCGAGCTAGCGAAAGATAAGGTCATGAAC
ATGCTATATGATGAATTGAGAACCTGGACAGCGCACTGCTCCTTCCGTGTCGGGCCAATT
CTGGTTGTCGACGAACCATTCACGATTGACAATGGTCTGATGACACCCACCATGAAAATA
AGGAGGGACAAAGTGACAGACAAGTACAGGAGGGAGATCGAAGCCTTGTTCAAGTGA

Peptide Sequence

PEP ID

Zm00001d034832_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:1:303279393:303289233:-1 gene:Zm00001d034832 transcript:Zm00001d034832_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable acyl-activating enzyme 16 chloroplastic
Sequence

MRPPRPGEGHEAARRDTATSAHLSCPSPMPGVVALYRSRLPIYSSRASEANEMSLWIAGT
GAMLAASASSGQMAGLCVPRRSPTPPLLARRGRGRGRLLPRRPATLLRRDLRPAAAASPP
PQSAGSAIEHQVRKKCSPLLESALLPGGSDSTLHEWKAVPDIWRTAAEKYADLVAVVDPY
HEPPTEWTYTQLEQEILDFSQGLRAIGVAPDEKLALFADNSCRWLVADQGIMATGAINVV
RGTRSSDEELFQIYTHSESIALVVDSPQFFNRLAESFMSRINTRFIVLLWGDKSCIDSQA
IKDIPLYGYKDIIELGRESRNALFLSDEQGQQDVFESISPEDVATLIYTSGTSGTPKGVM
LTHRNLLHQINNLWEIVPAEPGDRFLSMLPTWHAYERACEYFIFSYGIQQVYTTVKYLKE
DLQRYQPQYIISVPLVYETLYISIHRQISSSSAARKIIALSLIKISFLYMEAKKIYEGTV
LSNNLVKPSVIAYMMKWLWARLVAAFLWPLHNLAKILVYKKIHSAIGISKAGISGGGSLP
MHVDKFFEAIGIKVQNGYGLTETSPVVAARRPFCNVLGTVGHPIKHTEIKIFDIETGEVL
PDGSKGIVKIKGPQVMKGYYKNPSATNEAFDQEGWFSTGDVGWIVPHHAMGPSRQCGGMI
VLEGRAKDTIVLSTGENVEPAEIEEAASRSTLINQIVVIGQDQRRLGAIIVPNNDEVLAE
AKRKSILGEDGELAKDKVMNMLYDELRTWTAHCSFRVGPILVVDEPFTIDNGLMTPTMKI
RRDKVTDKYRREIEALFK

Transcript Sequence

Transcript ID

Zm00001d034832_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:303279393:303289233:-1 gene:Zm00001d034832 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable acyl-activating enzyme 16 chloroplastic
Sequence

GACGCAGAGTCTGGTGGGCCCGTCGCGGCCGCTCCGCCTCGATGCGACCACCACGTCCTG
GCGAAGGCCACGAGGCCGCCCGACGCGACACGGCCACCTCAGCTCACCTGTCCTGTCCCT
CACCAATGCCGGGCGTCGTCGCTCTCTACCGGTCCCGGCTCCCTATATACTCGAGCCGAG
CGAGCGAGGCAAACGAGATGAGCCTCTGGATCGCCGGCACAGGCGCGATGCTCGCCGCCT
CCGCCTCGTCCGGTCAGATGGCCGGCCTCTGCGTCCCGCGCCGCTCACCCACTCCTCCGC
TCCTCGCCCGTCGCGGCCGCGGCCGCGGCCGATTGCTTCCTCGTCGCCCGGCCACGCTAC
TCCGCCGCGACCTCCGCCCCGCCGCCGCCGCGTCTCCGCCGCCCCAGTCCGCCGGCTCCG
CGATAGAACATCAAGTACGTAAAAAGTGCTCACCTCTACTGGAGAGTGCTCTGCTGCCTG
GTGGAAGTGATTCGACTCTGCATGAATGGAAGGCTGTTCCAGATATTTGGAGGACAGCAG
CAGAAAAATATGCTGACCTCGTAGCTGTGGTAGATCCTTACCATGAACCGCCAACGGAAT
GGACGTATACACAGCTTGAGCAAGAAATATTGGATTTTTCTCAAGGTCTAAGGGCCATTG
GTGTTGCTCCGGATGAAAAGCTAGCACTTTTTGCTGATAACTCATGTCGTTGGCTAGTTG
CAGATCAAGGAATCATGGCAACCGGTGCTATAAATGTTGTTAGGGGAACAAGATCATCTG
ATGAAGAATTGTTTCAAATATACACTCATTCAGAAAGCATTGCACTTGTTGTGGACAGTC
CTCAATTCTTTAACCGGCTTGCAGAGTCTTTCATGTCAAGGATTAATACAAGATTCATTG
TTCTTCTTTGGGGTGACAAATCATGCATAGATAGCCAAGCTATTAAGGATATACCACTTT
ATGGATACAAGGATATCATCGAACTTGGTCGAGAAAGCCGCAATGCACTGTTTCTTTCCG
ACGAGCAAGGTCAGCAAGATGTCTTTGAATCTATTAGTCCTGAAGATGTGGCCACACTAA
TATATACTAGTGGAACAAGTGGCACACCAAAAGGCGTAATGCTTACCCACCGAAATCTCT
TGCATCAGATAAATAATCTGTGGGAGATTGTACCAGCAGAACCTGGTGATAGGTTCCTAA
GCATGCTTCCAACATGGCATGCATATGAGCGTGCTTGTGAGTACTTCATCTTCTCGTATG
GTATCCAGCAAGTTTACACTACTGTTAAGTACCTGAAGGAAGATTTGCAGCGTTACCAGC
CTCAATATATTATATCAGTACCACTGGTCTACGAAACTCTGTACATTTCAATTCATAGGC
AGATTTCATCCAGTTCTGCTGCTCGAAAAATTATTGCTCTTTCACTTATCAAGATAAGTT
TCCTATATATGGAGGCAAAGAAGATCTATGAGGGAACAGTTTTATCAAACAATCTTGTCA
AACCATCAGTCATCGCCTATATGATGAAGTGGCTGTGGGCAAGATTGGTTGCTGCATTTC
TTTGGCCTTTACATAATCTGGCGAAGATTCTAGTATACAAGAAAATTCATTCAGCAATCG
GGATTTCAAAGGCTGGTATTAGTGGCGGTGGAAGTCTTCCGATGCATGTTGATAAGTTTT
TTGAGGCCATTGGCATTAAAGTACAAAACGGCTATGGCCTTACTGAGACTTCTCCTGTTG
TTGCTGCTAGACGACCATTCTGTAATGTTCTTGGGACAGTTGGTCACCCAATAAAGCATA
CTGAAATCAAGATTTTTGACATTGAGACTGGTGAGGTCCTTCCAGATGGTTCAAAGGGGA
TTGTGAAAATTAAAGGACCACAAGTAATGAAGGGATACTATAAGAACCCATCGGCTACAA
ATGAAGCTTTTGATCAAGAGGGTTGGTTCAGCACTGGAGATGTAGGTTGGATAGTACCTC
ATCATGCCATGGGGCCAAGTCGCCAGTGTGGAGGGATGATTGTTCTTGAAGGGCGTGCAA
AGGATACAATAGTCCTATCTACAGGTGAAAATGTTGAACCTGCTGAGATCGAGGAAGCAG
CCAGCAGGAGTACCTTGATTAATCAGATAGTTGTGATCGGGCAGGATCAACGGCGTCTTG
GTGCCATAATTGTTCCCAACAATGATGAAGTTCTGGCAGAAGCAAAAAGGAAGTCCATCC
TTGGTGAGGATGGCGAGCTAGCGAAAGATAAGGTCATGAACATGCTATATGATGAATTGA
GAACCTGGACAGCGCACTGCTCCTTCCGTGTCGGGCCAATTCTGGTTGTCGACGAACCAT
TCACGATTGACAATGGTCTGATGACACCCACCATGAAAATAAGGAGGGACAAAGTGACAG
ACAAGTACAGGAGGGAGATCGAAGCCTTGTTCAAGTGACACGCGGAGCGCGTGCGCACCC
ATCAGAGTTCCCTTTTCCGAGTACAAGACGGCAACCGTACGGCGTACATACAGACACCTG
CAAGCTGCAATGCGTCCATGTACCATGTATACGTACGTACTTGCGTACGGTCGGAAGATG
ACTGGGTTGGAACTGGAAGAGATGATATGGCGGAGCGGCCGGTGGGAGAACACCATGAGA
CTTGTTACTAGACTCGAATGTTCGTAGGTTGCATGAGCAAAATGACATGTGTTCCACAAT
TGCATCATTCAATAAGCGATTCACTGAGCCAGATAAGGTCTTGTTCGGTTAGTTCTCAAT
CCATATATATGGATTGAGTGAGTTTAAATCCCAAACAAGTCAAACTTCTTCTTAATTTTT
TTCAATCTCATCCAATCCATATGTAATGACAATAACCGAACAAGGCATGAATCAATAAAA
TTCTCC