Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034817_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:1:302864909:302869482:1 gene:Zm00001d034817 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform
Sequence

ATGATAAAGCAATTTCTTGGACGTCTCCCCAAGAAGCCATCCAAATCTGGAGATAAGGAT
CCTATTGGCCGGCCCAGCCCCTCGGTGTCGCACCAGCCATTGGGTCCGAGAGCTGGAGAC
AGGGCCACCAACTTGAGTAGCCATCCACCGGTTATCTCCAGCTCTGGGCTCAGTTATGGG
AGTGGCATGCATGTCGGCAATGCATACACGAAGGCACACGTGAACGGTGATTCGGCCGCT
TCAGCATTTCGGTCGTTGCCGAGCTTCAAGGACGTGCCCAACACAGAGAAACAGAACTTG
TTTAATGAGAAGTTGAACTTGTGCTGCGCCCAATTTGACTTCACCGATCCAACAAAGAAC
ATAAAGGAGAAGGAGATAAAGAGGCAAACTTTGGTGGAGCTCGTTGACTATATTGCCTCG
GCCAGTGGGAAATTTTCTGAGGCAAGCATGCAAGAGATCACAAAAATGGTTTCTGCAAAC
CTGTTCAGGACGCTGAGTACTCCTCCTAGAGACAACAAAGTGGATGGCTTTGATGTGGAT
GAGGAGGAGCCTGTCATGGACCCTGCATGGCCACACTTGCAGATTGTCTATGAGTTGTTC
TTGAGATTCATTCAGTCTCAAGAGACAGACGCCAAGTTGGCTAAACGGTACATTGATCAT
TCGTTTGTTCTGAGGCTACTTGACCTCTTTGATTCAGAAGACCCTAGGGAGAGAGAGTAC
CTCAAGATGATACTTCACCGTGTCTATGGAAAGTTCATGGTTCATCGGCCCTATATTCGG
AAAGCCATTAACAACATTTTCTATCAGTTCATCTATGAAACTGAAAAACACAATGGAATC
GCAGAGTTATTGGAGATTTTGGGAAGTATCATCAATGGGTTTGCATTGCCACTTAAGGAA
GAGCATAAATTGTTCCTTGTTCGAGCTTTAATTCCACTTCACAAGCCAAAGTGCATCGCG
ATGTATCATCAGCAATTATCTTACTGTATCACCCAGTTTGTCGAAAAAGATTGCAAACTT
GCAGATACAGTTATCAGAGGCCTGCTAAAATATTGGCCAATCACTAATAGCTCCAAGGAG
GTGCTGTTTCTGGGGGAGTTGGAAGAGATATTGGAAGCTACGCAACCTGCAGAGTTTCAG
AAATGCATGGTCCCTCTCTTCCGCCAGATCGCACGTTGCCTGAATAGCTCACACTTTCAG
GTTGCTGAGCGGGCGCTATTTTTGTGGAATAACGACCACATCGAGAGTCTGATCAAACAA
AACAGCAGGGTTATATTGCCTATCATCTTTCCTGCACTGGAGAGAAATGCCAGTGGGCAC
TGGAACCAAGCTGTGCAAAGCCTCACTCTAAACGTCCGAAAACTGTTCTCTGACAATGAC
CCTGGACTATTCACGGAGAGTCTGCGGAAATACGAGGAAGAGAAAGCGAGAGAGAAGGAG
GTTAAGTCGAAGCAAGAGGCCACATGGAGACGCCTTGAAGAGATGGCATCAGCGAAAGCG
ACAAGCGGCGCGGCAGTTCTCGTCTCTCGACCCTTATCCCGGCAGTCTTCGGCTGTGTAG

Peptide Sequence

PEP ID

Zm00001d034817_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:1:302864909:302869482:1 gene:Zm00001d034817 transcript:Zm00001d034817_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform
Sequence

MIKQFLGRLPKKPSKSGDKDPIGRPSPSVSHQPLGPRAGDRATNLSSHPPVISSSGLSYG
SGMHVGNAYTKAHVNGDSAASAFRSLPSFKDVPNTEKQNLFNEKLNLCCAQFDFTDPTKN
IKEKEIKRQTLVELVDYIASASGKFSEASMQEITKMVSANLFRTLSTPPRDNKVDGFDVD
EEEPVMDPAWPHLQIVYELFLRFIQSQETDAKLAKRYIDHSFVLRLLDLFDSEDPREREY
LKMILHRVYGKFMVHRPYIRKAINNIFYQFIYETEKHNGIAELLEILGSIINGFALPLKE
EHKLFLVRALIPLHKPKCIAMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPITNSSKE
VLFLGELEEILEATQPAEFQKCMVPLFRQIARCLNSSHFQVAERALFLWNNDHIESLIKQ
NSRVILPIIFPALERNASGHWNQAVQSLTLNVRKLFSDNDPGLFTESLRKYEEEKAREKE
VKSKQEATWRRLEEMASAKATSGAAVLVSRPLSRQSSAV

Transcript Sequence

Transcript ID

Zm00001d034817_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:302864909:302869482:1 gene:Zm00001d034817 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform
Sequence

GTTTGGGTAGGGACCTCCACCCCTCACACCTGATCGCCTTTGTTCTAGCTGTTCATTTTG
TACCGGGGGACCATTTTTTGCTTTGACTGCGGGTTGAAGCCGCTCGATTTGCTCACCAGA
AATTCAGATTTTCGAGTGGAATTCGCTTAATATAGCAATGCACTAGGGTTTACTGTGCAC
CACTAGGCTACTGCCTCTGCTATTAGGAAGCCGACATCTGTTGTTTCCGAAGTCTTTCAA
GTCTCTGTTGGGTGGCGTTGCTATTGTGGGTGTGATAACATGATAAAGCAATTTCTTGGA
CGTCTCCCCAAGAAGCCATCCAAATCTGGAGATAAGGATCCTATTGGCCGGCCCAGCCCC
TCGGTGTCGCACCAGCCATTGGGTCCGAGAGCTGGAGACAGGGCCACCAACTTGAGTAGC
CATCCACCGGTTATCTCCAGCTCTGGGCTCAGTTATGGGAGTGGCATGCATGTCGGCAAT
GCATACACGAAGGCACACGTGAACGGTGATTCGGCCGCTTCAGCATTTCGGTCGTTGCCG
AGCTTCAAGGACGTGCCCAACACAGAGAAACAGAACTTGTTTAATGAGAAGTTGAACTTG
TGCTGCGCCCAATTTGACTTCACCGATCCAACAAAGAACATAAAGGAGAAGGAGATAAAG
AGGCAAACTTTGGTGGAGCTCGTTGACTATATTGCCTCGGCCAGTGGGAAATTTTCTGAG
GCAAGCATGCAAGAGATCACAAAAATGGTTTCTGCAAACCTGTTCAGGACGCTGAGTACT
CCTCCTAGAGACAACAAAGTGGATGGCTTTGATGTGGATGAGGAGGAGCCTGTCATGGAC
CCTGCATGGCCACACTTGCAGATTGTCTATGAGTTGTTCTTGAGATTCATTCAGTCTCAA
GAGACAGACGCCAAGTTGGCTAAACGGTACATTGATCATTCGTTTGTTCTGAGGCTACTT
GACCTCTTTGATTCAGAAGACCCTAGGGAGAGAGAGTACCTCAAGATGATACTTCACCGT
GTCTATGGAAAGTTCATGGTTCATCGGCCCTATATTCGGAAAGCCATTAACAACATTTTC
TATCAGTTCATCTATGAAACTGAAAAACACAATGGAATCGCAGAGTTATTGGAGATTTTG
GGAAGTATCATCAATGGGTTTGCATTGCCACTTAAGGAAGAGCATAAATTGTTCCTTGTT
CGAGCTTTAATTCCACTTCACAAGCCAAAGTGCATCGCGATGTATCATCAGCAATTATCT
TACTGTATCACCCAGTTTGTCGAAAAAGATTGCAAACTTGCAGATACAGTTATCAGAGGC
CTGCTAAAATATTGGCCAATCACTAATAGCTCCAAGGAGGTGCTGTTTCTGGGGGAGTTG
GAAGAGATATTGGAAGCTACGCAACCTGCAGAGTTTCAGAAATGCATGGTCCCTCTCTTC
CGCCAGATCGCACGTTGCCTGAATAGCTCACACTTTCAGGTTGCTGAGCGGGCGCTATTT
TTGTGGAATAACGACCACATCGAGAGTCTGATCAAACAAAACAGCAGGGTTATATTGCCT
ATCATCTTTCCTGCACTGGAGAGAAATGCCAGTGGGCACTGGAACCAAGCTGTGCAAAGC
CTCACTCTAAACGTCCGAAAACTGTTCTCTGACAATGACCCTGGACTATTCACGGAGAGT
CTGCGGAAATACGAGGAAGAGAAAGCGAGAGAGAAGGAGGTTAAGTCGAAGCAAGAGGCC
ACATGGAGACGCCTTGAAGAGATGGCATCAGCGAAAGCGACAAGCGGCGCGGCAGTTCTC
GTCTCTCGACCCTTATCCCGGCAGTCTTCGGCTGTGTAGCGAATTTTCATGTGGTGGTCG
TGAGAACATTGTACAGGATTGAGTTGTATATACGAGGTATATTAAGGTGGGCAAATTGAC
AAATGATATCGTCGGAGAAGCCAGCCAGATGGGTTACAGGGCTAGGCACACATCATTTTC
TTGGTCCCGAATCTGGGCTTCTGCTAAGATCTACAGCTGGTCGCGGTATCATCATTATGT
TTATCCTTGTCAGGAGTTGGCTATGATTCAATTGTTTTCACCTGCTGGTCCTGCAGTCTT
GCCATGCATGGGTATCTGTTTCTGGAGACAAAAAATCGGTGGAAGTCGATAGAACTTAGA
GCCTGGAAACGAGTCGTGCTGTTGTTCTTGGAGTCTGGAATTGTTGCGTTTCTTTCTAGT
ACAATTCATGTGTTGTCATCATTAGAAGTTAAATCCTTTGTGCTCATCATCATCATACGT
ATGTGGATCCAATTATAAATGCCTGATAAATGGTTAAGGGT