Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034808_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:302533836:302535390:1 gene:Zm00001d034808 gene_biotype:protein_coding transcript_biotype:protein_coding description:30S ribosomal protein S6 alpha chloroplastic
Sequence

ATGCCGCCACCCATGGCACTGCTGCCGCTCTCCTCCGCATCCGCGTCCGCCGCGCTGCCG
CCCTTCCGCTCCTGCCCGCCCGCTGCGATGCTGCTTCGCCTCCCCTCCCCCGCCCCCTCC
CATTTCGCCCGCCCCCGCGCGGTCTCCACTGGGTACGCGGCGTCCTTCTACGGCGGCTCG
GCGATGTCCGCGGCCGGCGGCGCGGACGAGGAGGAGGAGGTCGGCTACGAGTCGGGGTTC
GGCCCGGGGCTAGGGCTGGGCGGCGGCGGCCTCGGGATGTCGGCCGCGGAAGCCGCGCTG
GCGCTGGAGGAGCGCGAGATGCCGCCCTGCCCACCCGGCCTCCGCCAGTACGAGACCATG
GTCGTGCTCCGCCCCGACATGTCCGAGGAGGAGCGCCTCGCCTTCATCCAGCGCTACGAG
GAGCTGCTCGTCGCCGGCGGCGCCATGTACGTGGAGGTCTTCAACCGCGGTGTCATCCCG
CTGGCATACAGCATCAGGAAGAGGAACAGCCGCACCGGGCTGCCGTCCACCTACTACGAC
GGCATCTACCTCCTCATCACCTACTTCACCAAGCCGGAGTCCATGGACGCCCTGCAGCTT
AAGCTCAACGCCGACGACGACGTCATCCGCTCCACCAGCTTCAAGGTCCGCCAGCGGAAG
GCCGTCTAG

Peptide Sequence

PEP ID

Zm00001d034808_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:302533836:302535390:1 gene:Zm00001d034808 transcript:Zm00001d034808_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:30S ribosomal protein S6 alpha chloroplastic
Sequence

MPPPMALLPLSSASASAALPPFRSCPPAAMLLRLPSPAPSHFARPRAVSTGYAASFYGGS
AMSAAGGADEEEEVGYESGFGPGLGLGGGGLGMSAAEAALALEEREMPPCPPGLRQYETM
VVLRPDMSEEERLAFIQRYEELLVAGGAMYVEVFNRGVIPLAYSIRKRNSRTGLPSTYYD
GIYLLITYFTKPESMDALQLKLNADDDVIRSTSFKVRQRKAV

Transcript Sequence

Transcript ID

Zm00001d034808_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:302533836:302535390:1 gene:Zm00001d034808 gene_biotype:protein_coding transcript_biotype:protein_coding description:30S ribosomal protein S6 alpha chloroplastic
Sequence

CTTATCTATCGAGTGGACGCGACGCCAACAGCGTCAGCGCCTCCTCCCGCTCTCCGGCTC
CTGTCCTGCTCGCGCTCGTCGCCCCCCTGCCGCTCGGCTCCCCTTGGCCCCTCCAATGCC
GCCACCCATGGCACTGCTGCCGCTCTCCTCCGCATCCGCGTCCGCCGCGCTGCCGCCCTT
CCGCTCCTGCCCGCCCGCTGCGATGCTGCTTCGCCTCCCCTCCCCCGCCCCCTCCCATTT
CGCCCGCCCCCGCGCGGTCTCCACTGGGTACGCGGCGTCCTTCTACGGCGGCTCGGCGAT
GTCCGCGGCCGGCGGCGCGGACGAGGAGGAGGAGGTCGGCTACGAGTCGGGGTTCGGCCC
GGGGCTAGGGCTGGGCGGCGGCGGCCTCGGGATGTCGGCCGCGGAAGCCGCGCTGGCGCT
GGAGGAGCGCGAGATGCCGCCCTGCCCACCCGGCCTCCGCCAGTACGAGACCATGGTCGT
GCTCCGCCCCGACATGTCCGAGGAGGAGCGCCTCGCCTTCATCCAGCGCTACGAGGAGCT
GCTCGTCGCCGGCGGCGCCATGTACGTGGAGGTCTTCAACCGCGGTGTCATCCCGCTGGC
ATACAGCATCAGGAAGAGGAACAGCCGCACCGGGCTGCCGTCCACCTACTACGACGGCAT
CTACCTCCTCATCACCTACTTCACCAAGCCGGAGTCCATGGACGCCCTGCAGCTTAAGCT
CAACGCCGACGACGACGTCATCCGCTCCACCAGCTTCAAGGTCCGCCAGCGGAAGGCCGT
CTAGTTAGACGGGTTGCCTCCTCCGCCTTCAGGCCCTGAACACTGTTTTGTTCACATACC
ATACTACAAGAAATCTGCTGTACAAGAATCCACCTTTGCCATGATTGTTGAGTTTTTTTT
TTTTGAAT