Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034796_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:302378528:302383638:1 gene:Zm00001d034796 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 9A
Sequence

ATGCTCACCGCGCAGCCGCCACCTGAGGTAGCGGGTGAGGATGACAGCAGTTTCCACCAT
GTCTTCGTGGAGTTTATGACCAAAGCCGCTCAGTTCGAGGAGCTCGCTGAATCTGGGGAG
CGATTGCTTGGGAGATTCCGTGAGGAGCTTGAGTATTTTCGTAGGCCCCAGATTCCTAAG
GAATCAGATGTCATGAATCAGATACTTAAATCCAACTGCACTGTCAGAATGAGGTCCTAT
GTTGAAGCTGGCTGCAGGCTTCACTACCAAAACATCTCAAACATAAATCAGTTAAGCTCA
TCCGAAGCTGGACTTAAAGATCATATAAAGAAAGCTAAGACTTTGCTCGAAGAACTTGAA
TGTCTAGTCGAGAATGTCTATGGCATCACATTAACATCCAGTTTAAGTGCTCTGGAAGTT
TCAGACAGTCATTGCCTCGACAACATGCCAAGCACCGATTGCTATGCCATGGAGGAGGAT
AAACGAGCAGATCATTTGGACATGGACGTATCGCTCGTTACGGTGATGGCCATGGTTCGC
AACATGCTGAAGCTTGACTACACGATGCAGGAGAAGATTGTCACTGCATTGTCCTTGAAA
ACACCAGCATCGGAGCTCGAGGGATACTGCCTCATGTGGGATCTACGCCCGTACATCGAT
GACGACGTGATGCGTCTTGCGTGGAACATGTGTCCTTGA

Peptide Sequence

PEP ID

Zm00001d034796_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:302378528:302383638:1 gene:Zm00001d034796 transcript:Zm00001d034796_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 9A
Sequence

MLTAQPPPEVAGEDDSSFHHVFVEFMTKAAQFEELAESGERLLGRFREELEYFRRPQIPK
ESDVMNQILKSNCTVRMRSYVEAGCRLHYQNISNINQLSSSEAGLKDHIKKAKTLLEELE
CLVENVYGITLTSSLSALEVSDSHCLDNMPSTDCYAMEEDKRADHLDMDVSLVTVMAMVR
NMLKLDYTMQEKIVTALSLKTPASELEGYCLMWDLRPYIDDDVMRLAWNMCP

Transcript Sequence

Transcript ID

Zm00001d034796_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:302378528:302383638:1 gene:Zm00001d034796 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 9A
Sequence

GCTCCGTGGAAGTTTGCTGGCTGCTGAGGCTCGTTCGAGGCGGTGGAGGACAGGCAGGCA
GGCAGCTCTCCGTTCGGCTTGGCTTGGCTTGGACGGCTGCCGCGTCGCGCACCTGCGGGC
GGGCAGTGGCCAGTGGCTGGGCGGTCCGGGGCCGGGGCAGCCAGGGGCGTCGTCGCGCTC
GTAGCCACTGAGGTCGGCGGCGGTGGCACCGTGGCAGTGCGGTGCCGAGAAACCGTCCCA
CCAAGGAGGCTGGGGCACCGAACAGCGAACAACGGAAGAAGAGCAGCTGAACAGGCAGGG
GAGAGGTTCCAGCTATGCTCACCGCGCAGCCGCCACCTGAGGTAGCGGGTGAGGATGACA
GCAGTTTCCACCATGTCTTCGTGGAGTTTATGACCAAAGCCGCTCAGTTCGAGGAGCTCG
CTGAATCTGGGGAGCGATTGCTTGGGAGATTCCGTGAGGAGCTTGAGTATTTTCGTAGGC
CCCAGATTCCTAAGGAATCAGATGTCATGAATCAGATACTTAAATCCAACTGCACTGTCA
GAATGAGGTCCTATGTTGAAGCTGGCTGCAGGCTTCACTACCAAAACATCTCAAACATAA
ATCAGTTAAGCTCATCCGAAGCTGGACTTAAAGATCATATAAAGAAAGCTAAGACTTTGC
TCGAAGAACTTGAATGTCTAGTCGAGAATGTCTATGGCATCACATTAACATCCAGTTTAA
GTGCTCTGGAAGTTTCAGACAGTCATTGCCTCGACAACATGCCAAGCACCGATTGCTATG
CCATGGAGGAGGATAAACGAGCAGATCATTTGGACATGGACGTATCGCTCGTTACGGTGA
TGGCCATGGTTCGCAACATGCTGAAGCTTGACTACACGATGCAGGAGAAGATTGTCACTG
CATTGTCCTTGAAAACACCAGCATCGGAGCTCGAGGGATACTGCCTCATGTGGGATCTAC
GCCCGTACATCGATGACGACGTGATGCGTCTTGCGTGGAACATGTGTCCTTGAAGCATTG
GGGCTTTGAGTTGTTTCTGCTGGGATGGATGTCTGGTCTGTTCATTATTTTCTTATGTAT
GACAACGTGGTTGTGTGTGTTCATGGTCGTCTTCTGGAGACGAGAAACACATGGGTGTTG
TTTGGTTCACATAAATTGGTAACTAATAATATTAGATTATGTTTGT