Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034778_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:302094745:302097912:-1 gene:Zm00001d034778 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane and coiled-coil domain-containing protein 5B
Sequence

ATGTCGTCGTCGGCGAAGGCCAAGGCCAAGGCGAGCGGCGGCAAGCGGGCTGCGGCGGCG
AAGGACCCCGCCGAGGCGGTCGTTTCCGACAAGAGGCGGCGGGAGCGCGGCGGCATGGAC
GACTCCGACCACGAGTTCGACAGTGACATGAAGGAGATCGTCACGCTGCTGAAGCACATC
AAGGACAAGGCCCACAAGGACGGCCAGAAGAAGACCGAGCAGGCCATTTCCAGCGTGGCA
ACAGAGATTCAGACTATGGTACAGGACACCAAGAATAGGCTTGAGAAAGAAAGGCAGAGT
TTTCTGAAAGCATTGTCAAAGACTTCAAAAGAGTGCGAAAGTTTGTTGAAGAATGAGTAC
ACCAAATTTCTAGCAACACATGACAAGTTCTGCAAAGATAAAGTTGCACACATACAGAAT
TTCAAAGACCTGTTCTCAAAGTTTGAAGATGATAAAGAGAAATTGCTTGTGCAGTATGAA
CTGCAAAGGAAGAAGGAGAAGGCTACTCTATCTGAACTTGAGAAAACATTTTCAGAGAAG
ATAGCAAATGCTGAAGAATCTCTGAAGAAGATGAAGCAGGATGATAAATCAATCCACATC
CTTCGCAAGTCCATTGGCTCATTTCTGAGTGGTGACCCTGATGATCAGTCTGGTCAAGAT
GATGACTGA

Peptide Sequence

PEP ID

Zm00001d034778_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:302094745:302097912:-1 gene:Zm00001d034778 transcript:Zm00001d034778_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane and coiled-coil domain-containing protein 5B
Sequence

MSSSAKAKAKASGGKRAAAAKDPAEAVVSDKRRRERGGMDDSDHEFDSDMKEIVTLLKHI
KDKAHKDGQKKTEQAISSVATEIQTMVQDTKNRLEKERQSFLKALSKTSKECESLLKNEY
TKFLATHDKFCKDKVAHIQNFKDLFSKFEDDKEKLLVQYELQRKKEKATLSELEKTFSEK
IANAEESLKKMKQDDKSIHILRKSIGSFLSGDPDDQSGQDDD

Transcript Sequence

Transcript ID

Zm00001d034778_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:302094745:302097912:-1 gene:Zm00001d034778 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane and coiled-coil domain-containing protein 5B
Sequence

GTCCCTAAATTCTCTGGGCCCAACGTCTCCCTCCACTCCCCTTGTCGGCCTTCGCCGTCC
ATTTCAAAAACCCGCGAAACCAAAGCACGGCGTCACGACCGCAGCATCCCCAGAGGCGGC
AAGGCGGTCTCTCTCGGGCCCGGGCACCAGAGGCGATGTCGTCGTCGGCGAAGGCCAAGG
CCAAGGCGAGCGGCGGCAAGCGGGCTGCGGCGGCGAAGGACCCCGCCGAGGCGGTCGTTT
CCGACAAGAGGCGGCGGGAGCGCGGCGGCATGGACGACTCCGACCACGAGTTCGACAGTG
ACATGAAGGAGATCGTCACGCTGCTGAAGCACATCAAGGACAAGGCCCACAAGGACGGCC
AGAAGAAGACCGAGCAGGCCATTTCCAGCGTGGCAACAGAGATTCAGACTATGGTACAGG
ACACCAAGAATAGGCTTGAGAAAGAAAGGCAGAGTTTTCTGAAAGCATTGTCAAAGACTT
CAAAAGAGTGCGAAAGTTTGTTGAAGAATGAGTACACCAAATTTCTAGCAACACATGACA
AGTTCTGCAAAGATAAAGTTGCACACATACAGAATTTCAAAGACCTGTTCTCAAAGTTTG
AAGATGATAAAGAGAAATTGCTTGTGCAGTATGAACTGCAAAGGAAGAAGGAGAAGGCTA
CTCTATCTGAACTTGAGAAAACATTTTCAGAGAAGATAGCAAATGCTGAAGAATCTCTGA
AGAAGATGAAGCAGGATGATAAATCAATCCACATCCTTCGCAAGTCCATTGGCTCATTTC
TGAGTGGTGACCCTGATGATCAGTCTGGTCAAGATGATGACTGAAGATGCTCTCACCAAA
TGGTTTCTAGTTTGAGATCTATGTGGATAATATGTTATTGGAGAATAGATATCAGTTCAT
AGGGGAGGCAAGGATTAGGGAGTTGATAGTTTGTGACTGCACAACTCAGTGTGTTTAGCT
TTCATCGGCTGGAGCTGTGATGTTCTGGAGAATGGTTTCAGGTTATTTTCTTGTTGGTGG
ATTTTAGTATTTTACGGCAAGATGCTTAGACGCTTTACAATT