Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034777_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:1:302038546:302052675:1 gene:Zm00001d034777 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nicotinate phosphoribosyltransferase 2
Sequence

ATGGCGGCGGCGAACGGGGACGCGTGCCGCAGCGTCGGCGGGGTGCCGCGCCCGACGAAC
CCCATGGTGACGCCGCTGCTCACCGACCTGTACCAGTTCACCATGGCCTACGCCTACTGG
AAGGCCGGCAAGCACCTCGACCGCGCAGTCTTTGATCTCTACTTCCGGAAAAATCCATTT
GGCGGGGAGTTCACCATCTTCGGTGGCCTCGAGGAATGTATAAGGTTCATTGCTAACTTC
AAGTTCACGGAGGAGGAAATCAAATTTCTTCGATCTGTCATGCCTGCATGTGAGGATGAC
TTCTTTGAGTACCTCCGTTCGATTGACTGCTCAGACGTGGAGGTTTATGCCATACCAGAG
GGTTATGCTGTGTTCCCTAAAGTTCCACTGATGAGAATTGAAGGACCTGTTGCTGTTGTC
CAGCTTCTTGAAACTCCATTTCTAAGTCTTGTCAACTATGCTTCTCTGGTTACCACGAAT
GCGGCACGGCACCGACTTGTAGCTGGGAAGTCAAAGAATTTACTTGAATTTGGACTTCGA
CGGGCTCAAGGGCCTGATGGAGGAATCAGTGCATCAAGATATTGTTATATGGGAGGATTT
GATGCAACAAGCAATGTTGCAGCAGGAAGATTGTTTGGGATACCAATACGTGGGACTCAT
TCACATGCATTTGTGAGCTCCTTCATGGGTCTTGATGAAATTACTGACAAAACACTTACT
AGTTCTGATGGTTCAAACACATGTGAAGATTTTATCTCTCTGGTGCAGAACTGGCTGATC
AGGATTCAGGATTCTAGTTCATTGCATGGCACCTTTGGAGAAACGAGCCAAAGTGAGTTG
GCTGCATTCACGTCATATGCACTGGCATTTCCAAATTCCTTCCTGGCCTTGGTTGACACA
TATGATGTCATGAGAAGCGGAGTGCCAAACTTCTGTGCTGTTGCTTTGGCCCTCAATGAT
ATGGGGTATAAGGCAGTCGGAATTAGGTTGGACTCTGGTGATTTAGCATACCTATCCGTT
GAGGCCCGCAAGTTCTTCCATGCAGTTGAAAAAGAATTTGTAGTTGTTGGCTTTGGGAAA
ACAAGTATCACAGCAAGCAATGATCTTAATGAAGAAACTATAGATGCTCTGAACAAGCAG
GGCCATGAGGTAGATGCATTTGGTATTGGCACCTACCTAGTTACATGCTATGCACAAGCT
GCACTTGGTTGTGTATTCAAATTAGTTGAGATTAACAAACAGCCTCGTATTAAACTTTCT
GAAGATGTCATGAAGGTATCGATACCATGTAAGAAAAAATGCTACAGATTGTATGGCAAA
GAAGGGTATCCGTTGGTTGATATAATGACCGGAGAAGATGAGCCAGGTCCAAAGATGGTG
GGTTTTATGATTTACCATTCGTTTATAGATTGGTGA

Peptide Sequence

PEP ID

Zm00001d034777_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:1:302038546:302052675:1 gene:Zm00001d034777 transcript:Zm00001d034777_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nicotinate phosphoribosyltransferase 2
Sequence

MAAANGDACRSVGGVPRPTNPMVTPLLTDLYQFTMAYAYWKAGKHLDRAVFDLYFRKNPF
GGEFTIFGGLEECIRFIANFKFTEEEIKFLRSVMPACEDDFFEYLRSIDCSDVEVYAIPE
GYAVFPKVPLMRIEGPVAVVQLLETPFLSLVNYASLVTTNAARHRLVAGKSKNLLEFGLR
RAQGPDGGISASRYCYMGGFDATSNVAAGRLFGIPIRGTHSHAFVSSFMGLDEITDKTLT
SSDGSNTCEDFISLVQNWLIRIQDSSSLHGTFGETSQSELAAFTSYALAFPNSFLALVDT
YDVMRSGVPNFCAVALALNDMGYKAVGIRLDSGDLAYLSVEARKFFHAVEKEFVVVGFGK
TSITASNDLNEETIDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLS
EDVMKVSIPCKKKCYRLYGKEGYPLVDIMTGEDEPGPKMVGFMIYHSFIDW

Transcript Sequence

Transcript ID

Zm00001d034777_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:302038546:302052675:1 gene:Zm00001d034777 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nicotinate phosphoribosyltransferase 2
Sequence

ATCACAGGAGCACGCGACGCGCGCCACAGGAAGGAAGGGGAAAAACATGGCGGCGGCGAA
CGGGGACGCGTGCCGCAGCGTCGGCGGGGTGCCGCGCCCGACGAACCCCATGGTGACGCC
GCTGCTCACCGACCTGTACCAGTTCACCATGGCCTACGCCTACTGGAAGGCCGGCAAGCA
CCTCGACCGCGCAGTCTTTGATCTCTACTTCCGGAAAAATCCATTTGGCGGGGAGTTCAC
CATCTTCGGTGGCCTCGAGGAATGTATAAGGTTCATTGCTAACTTCAAGTTCACGGAGGA
GGAAATCAAATTTCTTCGATCTGTCATGCCTGCATGTGAGGATGACTTCTTTGAGTACCT
CCGTTCGATTGACTGCTCAGACGTGGAGGTTTATGCCATACCAGAGGGTTATGCTGTGTT
CCCTAAAGTTCCACTGATGAGAATTGAAGGACCTGTTGCTGTTGTCCAGCTTCTTGAAAC
TCCATTTCTAAGTCTTGTCAACTATGCTTCTCTGGTTACCACGAATGCGGCACGGCACCG
ACTTGTAGCTGGGAAGTCAAAGAATTTACTTGAATTTGGACTTCGACGGGCTCAAGGGCC
TGATGGAGGAATCAGTGCATCAAGATATTGTTATATGGGAGGATTTGATGCAACAAGCAA
TGTTGCAGCAGGAAGATTGTTTGGGATACCAATACGTGGGACTCATTCACATGCATTTGT
GAGCTCCTTCATGGGTCTTGATGAAATTACTGACAAAACACTTACTAGTTCTGATGGTTC
AAACACATGTGAAGATTTTATCTCTCTGGTGCAGAACTGGCTGATCAGGATTCAGGATTC
TAGTTCATTGCATGGCACCTTTGGAGAAACGAGCCAAAGTGAGTTGGCTGCATTCACGTC
ATATGCACTGGCATTTCCAAATTCCTTCCTGGCCTTGGTTGACACATATGATGTCATGAG
AAGCGGAGTGCCAAACTTCTGTGCTGTTGCTTTGGCCCTCAATGATATGGGGTATAAGGC
AGTCGGAATTAGGTTGGACTCTGGTGATTTAGCATACCTATCCGTTGAGGCCCGCAAGTT
CTTCCATGCAGTTGAAAAAGAATTTGTAGTTGTTGGCTTTGGGAAAACAAGTATCACAGC
AAGCAATGATCTTAATGAAGAAACTATAGATGCTCTGAACAAGCAGGGCCATGAGGTAGA
TGCATTTGGTATTGGCACCTACCTAGTTACATGCTATGCACAAGCTGCACTTGGTTGTGT
ATTCAAATTAGTTGAGATTAACAAACAGCCTCGTATTAAACTTTCTGAAGATGTCATGAA
GGTATCGATACCATGTAAGAAAAAATGCTACAGATTGTATGGCAAAGAAGGGTATCCGTT
GGTTGATATAATGACCGGAGAAGATGAGCCAGGTCCAAAGATGGTGGGTTTTATGATTTA
CCATTCGTTTATAGATTGGTGAAAGGCTCCTATGTCGTCACCCTTTCAATGAATCAAAGA
GAGCGTACGTTGTTCCACAGCATGTTGAGGAATTATTGAAGTGCTACTGGCCTGGAAATT
CATGTATGGAACCTCCCACCTGACGAATTCACGGGAGGAGCTTCCATCCATCCATGAGAT
TAGGACTCGGTGTATTCACCATCTGGACCGAATGAGGCCAGACCATATGAGGCGGCTGAA
CCCGACGCCTTACAAGGTAAGCGTGAGTGCTAAGCTGTATGACTTCATCCATTTCTTGTG
GCTCAACGAAGCGCCTGTCGGAGAACTGCAATGATGAAATGAAGTGGCGGTAGGGTCGGA
TCCCAAACCTAACTCTAATAAGCTGCTCCGCTTATGGGTGCCGTCGGAGCAAATAACAAA
CTGTTGCCGCCGGTGCAATTTCTGCAGTAGTTTTACCATCGCCTGCGCTCTAGTAAAATG
TGAGTATGTGCTGGTGCATCTGTCAAAACAGACCATAGCTGAAGTGTTACGTACTGGGAA
CAAGAGGATACCCATACCGAGTTAGATCTATATGACTGAACTAATTGCAATGAGGAGCAA
TCACTAAATTTG