Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034750_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:1:301294514:301300232:-1 gene:Zm00001d034750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pumilio homolog 24
Sequence

ATGGCAGGCGGCGGTCTCCAGGGAGCGAAGAAGCGCAAGCGCGAGCACGCGGAAGGGAAG
GCAAAGCCTCGGAAGCAAGTCAAGGGAGGCGGGGACGGAGCGAAGCGGAAGAGCCACTCG
GCCGCCGGCGGCTACACGGCCCATGGCGGCGCCGGCGAAGTTGTCGCGAGGAAGAAGACC
CCGGTTACCCCCAAGGAGAAGCGCCTCGCGGCCAAGGAAATGTCGGAGGCCAGGAAGATG
AAGAGGAGGCAGCATTACAGCCTTGAGAAGGAACTAACGAAATTGTGGGAAAAGATGAGA
TGTCACGATGTGAGCAAAGAGGAGAGGTCCAAGGCAGTAAGTCAGGCTATCCATAAAATG
GATGGGAAATATTTGGACATTGCCACATCACATGTTACTGCACGTGTTCTTCAAACATGT
GTAAAGTGGTGCTCGGAGTCAGAGAGGGATGCTATCTTTGATGTTCTACAGCCACATTTG
CTTACCCTTTCTTGCAAGAAATATGCCGTTTTTCTTGTAAAGAAGCTTATAGAACTCGCC
TCTAAAAAACAGTTTGCCAGTTTCATATCTTCCCTTCATGGTCGTGTTGCCAACCTTCTT
CATCATACTATTGGAGCTGCAGTCGTTGATTATGCATTTCAGCGAGGAACACAACGTCAG
AAAAGGCAATTGTTAGTTGAACTGTACTCCCCTGAACTTCAGCTATTCAAGGATCTGACT
GTGCAAAGTTCCTCCTGTTTGATAGATACAATTTCCAAGCTTGGGTTGCAGATATCATCT
GTCCTGCTTCATATGACTATTGTGATTGATAAAATCTTGGAGAAAGGTACTGTTGAGTAC
TTAATAGTGCACACGGCCATATTGGAGTACTTTACAATTGCAGATAAGACCTCAGCCTCG
GATGCTATTTGTCAACTTATCCCCCTTCTTACTCAAGGGGCATTAATCATAGATGGAGAT
GAACCTACAAACGCTCCAGAACTACCAAAGAAAGCAAAAGCTAAGAAGAAAAGGTCGAAA
GAGCCACTTATTGTTCGGATCATGCAGACAAGGGAAGGATTAAAACTAGGAATTAGTTGC
GTCAAGTATGGCAGTGCAAAGACTAAGTGGGCGCGAGAATGTATTTCAGGACAGGAAGAA
GATTATTAA

Peptide Sequence

PEP ID

Zm00001d034750_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:1:301294514:301300232:-1 gene:Zm00001d034750 transcript:Zm00001d034750_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pumilio homolog 24
Sequence

MAGGGLQGAKKRKREHAEGKAKPRKQVKGGGDGAKRKSHSAAGGYTAHGGAGEVVARKKT
PVTPKEKRLAAKEMSEARKMKRRQHYSLEKELTKLWEKMRCHDVSKEERSKAVSQAIHKM
DGKYLDIATSHVTARVLQTCVKWCSESERDAIFDVLQPHLLTLSCKKYAVFLVKKLIELA
SKKQFASFISSLHGRVANLLHHTIGAAVVDYAFQRGTQRQKRQLLVELYSPELQLFKDLT
VQSSSCLIDTISKLGLQISSVLLHMTIVIDKILEKGTVEYLIVHTAILEYFTIADKTSAS
DAICQLIPLLTQGALIIDGDEPTNAPELPKKAKAKKKRSKEPLIVRIMQTREGLKLGISC
VKYGSAKTKWARECISGQEEDY

Transcript Sequence

Transcript ID

Zm00001d034750_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:301294514:301300232:-1 gene:Zm00001d034750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pumilio homolog 24
Sequence

CTGCGTCGCCAGAGCGGAGCAACGAGGGGCGCGCGCGATGGCAGGCGGCGGTCTCCAGGG
AGCGAAGAAGCGCAAGCGCGAGCACGCGGAAGGGAAGGCAAAGCCTCGGAAGCAAGTCAA
GGGAGGCGGGGACGGAGCGAAGCGGAAGAGCCACTCGGCCGCCGGCGGCTACACGGCCCA
TGGCGGCGCCGGCGAAGTTGTCGCGAGGAAGAAGACCCCGGTTACCCCCAAGGAGAAGCG
CCTCGCGGCCAAGGAAATGTCGGAGGCCAGGAAGATGAAGAGGAGGCAGCATTACAGCCT
TGAGAAGGAACTAACGAAATTGTGGGAAAAGATGAGATGTCACGATGTGAGCAAAGAGGA
GAGGTCCAAGGCAGTAAGTCAGGCTATCCATAAAATGGATGGGAAATATTTGGACATTGC
CACATCACATGTTACTGCACGTGTTCTTCAAACATGTGTAAAGTGGTGCTCGGAGTCAGA
GAGGGATGCTATCTTTGATGTTCTACAGCCACATTTGCTTACCCTTTCTTGCAAGAAATA
TGCCGTTTTTCTTGTAAAGAAGCTTATAGAACTCGCCTCTAAAAAACAGTTTGCCAGTTT
CATATCTTCCCTTCATGGTCGTGTTGCCAACCTTCTTCATCATACTATTGGAGCTGCAGT
CGTTGATTATGCATTTCAGCGAGGAACACAACGTCAGAAAAGGCAATTGTTAGTTGAACT
GTACTCCCCTGAACTTCAGCTATTCAAGGATCTGACTGTGCAAAGTTCCTCCTGTTTGAT
AGATACAATTTCCAAGCTTGGGTTGCAGATATCATCTGTCCTGCTTCATATGACTATTGT
GATTGATAAAATCTTGGAGAAAGGTACTGTTGAGTACTTAATAGTGCACACGGCCATATT
GGAGTACTTTACAATTGCAGATAAGACCTCAGCCTCGGATGCTATTTGTCAACTTATCCC
CCTTCTTACTCAAGGGGCATTAATCATAGATGGAGATGAACCTACAAACGCTCCAGAACT
ACCAAAGAAAGCAAAAGCTAAGAAGAAAAGGTCGAAAGAGCCACTTATTGTTCGGATCAT
GCAGACAAGGGAAGGATTAAAACTAGGAATTAGTTGCGTCAAGTATGGCAGTGCAAAGAC
TAAGTGGGCGCGAGAATGTATTTCAGGACAGGAAGAAGATTATTAAAAGTTTGAAGGGCC
ACATTATGAAGCTTGCTCTAAGTGATTTTGGATGTCTTTTTCTTATCTGCATTATTTCTA
TTGTTGATGACACAAAGCTTGTTAATAAGATTGTCATTCAAGAGCTGGTAAAACATTTAA
AGCAGCTCATTTTTGACAAGAATGGGAGACGGCCATTGCTGCAACTACTTCACCCTTTTT
GCTCACGCTATCTTTCTCCGAATGATCTAGCTTGTCTGAACTACAATGTGCCTTCTCTTA
GTTCAACAGAGGTTGAGACATCAGAGAGTGCTATAGGAGTTATAACAGAAAATAAATTAG
ATGATGTGACTGCTCAAGATCCCAATGGCTTAGAAGGCAAGCAAATTGTGTTTGAGAGCA
AGAAGGATCCATTACAAAGGCGACATGAACTGTTGATAAAAAGTGAGCTTGCCGAGGCTC
TCGTTCAGTCATGCATTGAAAATGTTGGAGAATTACTTCGAACAAATTTTGGCAAAGAAG
TATTGTATGAGATGGCTGTTGGTGGTAAAGACAACGTTCTGGATGGCCTCACCGATAGGA
TCCACATGTTGCACGATGCAATAGCGTCTGATGCGGCCCAACCGAAGACTGAAGATACGG
AACATGCATTTGAAAACTTCTTTTCCAGCCGTGTAATCAGAAGAATGGTAATCGATTGCC
CAGCGTTTGCAGTCACTCTCTGGAGAAAGGCTCTTCAGGGGAAGTGCAAGATATGGGCTG
AAGGACACAGTTCGAAGGTGGTTGCGAGTTTCCTGGAGTCGCCAAGTACGGAGGTCAAGG
ATCTTGCAAAACCTGAGTTGCAGCCGCTGGTTGATGCTGGCATCCTTAAAGTGCCAGACC
CTAAGGTTGTTCAAAAATGACTCGTGCGCGGGGGCCTTTTTGCGCCAGTAAATGACTCGA
GGACCATCCCTTGTTTAAGGGATACGGATAGGTTTTTTGAAGCTCGTTCTGCCGATAAAA
ATTGTTAAATCACTCGTTCGTGTGTACGCCAGTCCGTTGTACACATACCCTGGATATATG
GTGAATCGGATACGTTATTTTGTTT