Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034730_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:1:300925569:300932505:1 gene:Zm00001d034730 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SBP-transcription factor 17 description:Squamosa promoter-binding-like protein 1
Sequence

ATGTACATGACTCTTAGAATTCTCCTTGCAGCTGATAATGTTCAGCATTCAAATGGCCAG
GAGTTGCTATCCACTCTTTTGAAGAACCTAGGGTCTGTTGCCAAATCACTGGAGCCAAAA
GAACTATGTAAACTCCTGGAGGCATACCAAAGCCTGCAAAATGGATCAAATGCTGGAACC
TCTGGAACAGCTAATGCCACAGAAGAGGCTGCAGGGCCATCTAACTCTAAGTTGCCTTTC
GTGAATGGTAGTCATTGTGGACATGCATCATCATCTGTTGTGCCAGTACAGTCGAAGGCT
ACCATAGTGGTAACTCCAGAGCCCGCATCATGCAAGCTTAAGGATTTTGATCTGAATGAC
ACTTGCAATGATATGGAAGGCTTTGAGGATGGACAAGAAGGTTCACCTACACCTGCCTTT
AAGACAGCTGACTCTCCTAATTGTGCATCATGGATGCAACAAGATTCTACTCAAAGTCCA
CCGCAGACTAGTGGCAACTCAGATTCAACATCAACACAATCATTGTCAAGCTCAAATGGA
GACGCTCAGTGCCGAACTGATAAGATTGTCTTCAAGCTTTTTGACAAAGTTCCCAGTGAT
TTACCCCCAGTTTTGCGGTCACAGATTCTTGGTTGGTTGTCAAGTAGCCCTACTGATATA
GAGAGCCATATTAGACCTGGGTGTATTATTCTAACAATATATCTACGGTTAGTTGAGTCT
GCATGGCAAGAGCTTTCTGAGAATATGAGCCTGCACCTGGATAAGCTTTTGAGTAGCTCC
ACTGACAACTTTTGGGCATCTGGCTTGGTATTTGTGATGGTTCGGCGTCGCTTAGCTTTT
ATGCTCAATGGTCAAATTATGTTGGACAGACCCCTGGCACCCAGTTCTCATCATTACTGC
AAGATTTTATGTGTCAAACCTGTTGCTGCACCTTATTCTGCAACAATAAATTTCAGAGTC
GAAGGATCTAATCTACTCAGTACTTCCTCAAGGCTAATTTGTTCATTTGAAGGACGTTGT
ATATTCCAGGAAGACACAGACTCTGTAGCAGAAAATGATGAGTATGAGGATAGGGCCATC
GAATGCCTCAGTTTTTGTTGTTCCGTTCCTGGTCCAAGAGGAAGAGGATTTATAGAGGTT
GAAGATAGTGGTTTTAGCAATGGCTTCTTCCCCTTCATAATTGCTGAGAAAGACATATGC
TTTGAGGTTTCTGAGCTGGAGAGCATATTTGAGTCCTCCAGTATCGAACATGCAGATGCT
AATGATAATGCCAGGGAACAAGCTCTGGAGTTTCTAAATGAGCTGGGTTGGCTTCTTCAC
AGAGCGAACAGAATGTCTAAAGAGAATGTAACTGATACATCTGTAGCTACCTTTAGCATG
TGGAGATTCAGGAATCTTGGTGTATTTGCCATGGAGCGGGAGTGGTGTGCTGTGATCAAA
ATGCTGTTAGATTTCTTATTTATTGGCCTTGTCGATGTGGGATCCCGATCTCCAGAAGAG
GTGGTGCTTTCAGAAAATTTGTTGCATGCTGCTGTACGGAGGAAGTCTGTTAACATGGTT
AGATTTCTGCTGAGATACAGACCAAACAAAAACTCCAAGGGGACTGCACAGACATACTTA
TTTAGACCTGATGCTCTGGGCCCGTCAATGATTACCCCCCTCCATATAGCAGCTGCCACT
AGTGATGCAGAGGATGTGTTGGATGTGCTGACCGATGATCCTGGACTGATTGGAATTAGT
GCTTGGAGCAATGCACGGGACGGAACAGGTTTTACCCCAGAAGATTATGCTCGGCAGAGA
GGCAATGATGCTTACCTGAATCTGGTCCAAAAGAAGATTGATAAGCATCTTGGCAAAGGC
CGTGTTGTCCTCGGTGTTCCGAGCAGTATATGCTCTGTAATAACTGATGGTGTTAAGCCT
GGCGATGTTAGCCTCGAGATCTGCATGCCAATGTCTGCATCAGTGCCAGGTTGCCTCCTC
TGCAGCCGTAAGGCACGGGTGTATCCGAATTCTACATCGAGGACCTTCCTTTACAGGCCA
GCGATGTTGACTGTGATGGGAGTTGCTGTGGTCTGTGTCTGCGTGGGCATACTCCTCCAT
ACCTTTCCCAGGGTTTATGCCGCGCCCACATTCAGATGGGAGTTGCTGGAGCGTGGACCC
ATGTAA

Peptide Sequence

PEP ID

Zm00001d034730_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:1:300925569:300932505:1 gene:Zm00001d034730 transcript:Zm00001d034730_T009 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SBP-transcription factor 17 description:Squamosa promoter-binding-like protein 1
Sequence

MYMTLRILLAADNVQHSNGQELLSTLLKNLGSVAKSLEPKELCKLLEAYQSLQNGSNAGT
SGTANATEEAAGPSNSKLPFVNGSHCGHASSSVVPVQSKATIVVTPEPASCKLKDFDLND
TCNDMEGFEDGQEGSPTPAFKTADSPNCASWMQQDSTQSPPQTSGNSDSTSTQSLSSSNG
DAQCRTDKIVFKLFDKVPSDLPPVLRSQILGWLSSSPTDIESHIRPGCIILTIYLRLVES
AWQELSENMSLHLDKLLSSSTDNFWASGLVFVMVRRRLAFMLNGQIMLDRPLAPSSHHYC
KILCVKPVAAPYSATINFRVEGSNLLSTSSRLICSFEGRCIFQEDTDSVAENDEYEDRAI
ECLSFCCSVPGPRGRGFIEVEDSGFSNGFFPFIIAEKDICFEVSELESIFESSSIEHADA
NDNAREQALEFLNELGWLLHRANRMSKENVTDTSVATFSMWRFRNLGVFAMEREWCAVIK
MLLDFLFIGLVDVGSRSPEEVVLSENLLHAAVRRKSVNMVRFLLRYRPNKNSKGTAQTYL
FRPDALGPSMITPLHIAAATSDAEDVLDVLTDDPGLIGISAWSNARDGTGFTPEDYARQR
GNDAYLNLVQKKIDKHLGKGRVVLGVPSSICSVITDGVKPGDVSLEICMPMSASVPGCLL
CSRKARVYPNSTSRTFLYRPAMLTVMGVAVVCVCVGILLHTFPRVYAAPTFRWELLERGP
M

Transcript Sequence

Transcript ID

Zm00001d034730_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:300925569:300932505:1 gene:Zm00001d034730 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SBP-transcription factor 17 description:Squamosa promoter-binding-like protein 1
Sequence

CCCCTCCAGTCCTCCACCCCTGCTGACTCCGTTGCTGTGCATTCCTGCCAAAGCTTCCCC
GCCGAATTCCCCAACCTCCCGCCGGATTCGCCCAGCTCGTCGACTCCGGAGTCCGATTCG
TGCACGGAGCAGCGGCCTGGGCCGCCAATTCGCTCGGTTCGGCGCCGCGCTGATTCGCTT
CGGTACTCTCTTTCTGCATGAGCTCGGGTTGGAGGTGGTGCCTCTGATTCCCGCTGGCCC
GAGGCGGAGGCGCGAGGGCATGTGGGTTTCTCTGGTGTGGATCCGGGGCTGCGTGGGCGT
CACGTTCGTCGATTTCCAGAGCGGGAGGGGAGCCGACTAGATCTCTCGGCTCCTGCGGTT
GCTGCGCTCCGTCGGGAGAGTTACCTGTGACCGGAGAAGGTTGCCGGAGGGTTTTGGGAG
GTGAGGGGACATGGAGGCCGCCAGGTTCGGCGCGCGGAGCAGCCACTTGTACGGCAGCGG
GCTGGGCGAGCTTGATCTCAACAGGCGCGAGAGCAGGGTGTTTGGCTGGGATCTCAACGA
GTGGAGCTGGGACAGTCAGCGGTTTACTGCCACGCCGGTGCCTGTTGAGGCGGCGAATGG
CTCTGGACTGAACAGCTCGCCGTCATCGTCCGAGGAAGCCGGGGAAGAGATGGCTAAGAA
TGGTGGCTTGGGAGGTGATACTGACAAGAGGAAAAGGGCCGTGGTCATTGACGACGACGA
CGATGATGAAACGGAGGATCAGGACACGGTCGTGAATGGTGGCGGGTCGCTCAGCCTGAT
AATAGGGGGTAGTGCTGCTGGTGCTGGAGCGATGGAGAACGGCGATGTAAATGAGGATGA
GAGAAATGGAAAGAAGATCAGGGTGCAAGGAGGCGGCTCAAGTGGGCCGGCATGCCAGGT
TGAGGGCTGCGGAGCAGATCTGACTGCAGCGAAGGATTATCACCGCCGGCACAAGGTCTG
CGAGATGCATGCTAAGGCCACCACCGCCGTGGTCGGAAACACTGTCCAGAGGTTCTGCCA
GCAATGCAGTAGATTTCACCTTCTTCAAGAATTTGATGAAGGGAAGCGAAGTTGCCGTCG
ACGCTTAGCAGGCCACAATAAACGGAGGAGAAAAACCCGCCCTGATACTGCAAGTTGTGG
GACTGCTTCAATTGAGGACAAAATCAGCAATTATCTACTGTTGAGCCTTATTGGAATCTG
TGCTAATTTGAACTAACTACTTGTATATCAGGAATGTACATGACTCTTAGAATTCTCCTT
GCAGCTGATAATGTTCAGCATTCAAATGGCCAGGAGTTGCTATCCACTCTTTTGAAGAAC
CTAGGGTCTGTTGCCAAATCACTGGAGCCAAAAGAACTATGTAAACTCCTGGAGGCATAC
CAAAGCCTGCAAAATGGATCAAATGCTGGAACCTCTGGAACAGCTAATGCCACAGAAGAG
GCTGCAGGGCCATCTAACTCTAAGTTGCCTTTCGTGAATGGTAGTCATTGTGGACATGCA
TCATCATCTGTTGTGCCAGTACAGTCGAAGGCTACCATAGTGGTAACTCCAGAGCCCGCA
TCATGCAAGCTTAAGGATTTTGATCTGAATGACACTTGCAATGATATGGAAGGCTTTGAG
GATGGACAAGAAGGTTCACCTACACCTGCCTTTAAGACAGCTGACTCTCCTAATTGTGCA
TCATGGATGCAACAAGATTCTACTCAAAGTCCACCGCAGACTAGTGGCAACTCAGATTCA
ACATCAACACAATCATTGTCAAGCTCAAATGGAGACGCTCAGTGCCGAACTGATAAGATT
GTCTTCAAGCTTTTTGACAAAGTTCCCAGTGATTTACCCCCAGTTTTGCGGTCACAGATT
CTTGGTTGGTTGTCAAGTAGCCCTACTGATATAGAGAGCCATATTAGACCTGGGTGTATT
ATTCTAACAATATATCTACGGTTAGTTGAGTCTGCATGGCAAGAGCTTTCTGAGAATATG
AGCCTGCACCTGGATAAGCTTTTGAGTAGCTCCACTGACAACTTTTGGGCATCTGGCTTG
GTATTTGTGATGGTTCGGCGTCGCTTAGCTTTTATGCTCAATGGTCAAATTATGTTGGAC
AGACCCCTGGCACCCAGTTCTCATCATTACTGCAAGATTTTATGTGTCAAACCTGTTGCT
GCACCTTATTCTGCAACAATAAATTTCAGAGTCGAAGGATCTAATCTACTCAGTACTTCC
TCAAGGCTAATTTGTTCATTTGAAGGACGTTGTATATTCCAGGAAGACACAGACTCTGTA
GCAGAAAATGATGAGTATGAGGATAGGGCCATCGAATGCCTCAGTTTTTGTTGTTCCGTT
CCTGGTCCAAGAGGAAGAGGATTTATAGAGGTTGAAGATAGTGGTTTTAGCAATGGCTTC
TTCCCCTTCATAATTGCTGAGAAAGACATATGCTTTGAGGTTTCTGAGCTGGAGAGCATA
TTTGAGTCCTCCAGTATCGAACATGCAGATGCTAATGATAATGCCAGGGAACAAGCTCTG
GAGTTTCTAAATGAGCTGGGTTGGCTTCTTCACAGAGCGAACAGAATGTCTAAAGAGAAT
GTAACTGATACATCTGTAGCTACCTTTAGCATGTGGAGATTCAGGAATCTTGGTGTATTT
GCCATGGAGCGGGAGTGGTGTGCTGTGATCAAAATGCTGTTAGATTTCTTATTTATTGGC
CTTGTCGATGTGGGATCCCGATCTCCAGAAGAGGTGGTGCTTTCAGAAAATTTGTTGCAT
GCTGCTGTACGGAGGAAGTCTGTTAACATGGTTAGATTTCTGCTGAGATACAGACCAAAC
AAAAACTCCAAGGGGACTGCACAGACATACTTATTTAGACCTGATGCTCTGGGCCCGTCA
ATGATTACCCCCCTCCATATAGCAGCTGCCACTAGTGATGCAGAGGATGTGTTGGATGTG
CTGACCGATGATCCTGGACTGATTGGAATTAGTGCTTGGAGCAATGCACGGGACGGAACA
GGTTTTACCCCAGAAGATTATGCTCGGCAGAGAGGCAATGATGCTTACCTGAATCTGGTC
CAAAAGAAGATTGATAAGCATCTTGGCAAAGGCCGTGTTGTCCTCGGTGTTCCGAGCAGT
ATATGCTCTGTAATAACTGATGGTGTTAAGCCTGGCGATGTTAGCCTCGAGATCTGCATG
CCAATGTCTGCATCAGTGCCAGGTTGCCTCCTCTGCAGCCGTAAGGCACGGGTGTATCCG
AATTCTACATCGAGGACCTTCCTTTACAGGCCAGCGATGTTGACTGTGATGGGAGTTGCT
GTGGTCTGTGTCTGCGTGGGCATACTCCTCCATACCTTTCCCAGGGTTTATGCCGCGCCC
ACATTCAGATGGGAGTTGCTGGAGCGTGGACCCATGTAAGTTTTAGGATGAGCCTTAGCT
GTTGTTTGTAACTTGTAAGCTAAGATCAAAGGAACATGATTACCGTGTGAAGAAGTTCAT
CTGTGTTTAACGCAAGATGCTGTTGCGGCTGTAAGCTTTATATACATCGTCGATTTCAAC
TATATTTACAGC