Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034714_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:300523648:300526443:1 gene:Zm00001d034714 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific phospholipase C1
Sequence	ATGGCTGCCGTGGCCCGCCGCGGCCCCGGGGCGCGCCTCCTCGCGGCGCTCCTCCTGCTG GCGCTGGTCGTCTCCGGGCACTGCCTGGACGCGCACCACCGCGGGCTGAAGCGCCGGCGG CGGAAGCACGAGATCCATTCCCCGGTCAAGACGGTGGTGGTGGTGGTGATGGAGAACCGC AGCTTCGACCACATCCTCGGCTGGCTCCGCCGCACCCGCCCCGACATCGACGGCCTCACG GGCCGCGAGTCGAACCGCCTCAACGCCTCCGACCCCGCATCCCCGGAGATCTTCGTCACC GACGAGGCCGGCTACGTAGACTCCGACCCCGGCCACGGCTTCGAGGACATCCGGGAGCAG ATCTTCGGCTCCGCCGACACCTCCGCGGTGCCGCCCCCAATGTCCGGATTCGCCCAGAAC GCGCGCGGCATGGGCCTCGGCATGCCGCAGAACGTCATGAGCGGCTTCAAGCCCGACGCC GTCCCCATCTACGCCTCCCTCGCCGACGACTTCGCCGTGTTCGACCGCTGGTTCGCCTCC GTGCCCACCTCCACGCAGCCCAACCGCCTGTTCGTCCACTCGGCGACCTCCCACGGCCTC ACCTTTAACGCCCGCAAGGACCTCATCCATGGTTTCCCGCAGAAGACCATCTTTGACAGC CTCGAGGAGAATGGCCTGTCTTTTGGCATCTACTACCAGAACATCCCGGCCACGCTCTTC TACCAGAGCCTCCGCCGCCTAAAGCACCTCATTAAGTTCCACCAGTACAGCCTCAAGTTC AAGTTGCACGCCAAGTTGGGGAAGCTGCCAAATTATGTGGTGATTGAACAAAGGTACTTT GATTGCGAGATGTTCCCAGCAAACGATGATCATCCCTCGCATGATGTGGCAAGGGGACAG AGGTTCGTCAAAGAGGTGTATGAAACACTGAGAGCCAGTCCGCAGTGGAACGAGACGGCC CTGATTATCACATATGATGAGCATGGTGGATTCTATGACCATGTACCTACGCCGGTCGTT GGAGTGCCCCAGCCTGATGGAATAGTTGGGCCTGATCCATACTACTTCAAGTTCGAACGG CTTGGGGTGCGTGTTCCCACCTTTCTCATCTCACCTTGGATAGAGAAGGGCACTGTGATC CATGAACCAAATGGTCCACAGGATACCTCGCAATATGAGCATTCGTCCATCCCTGCAACA GTAAAGAAGCTATTCAATTTACATTCTAACTTTCTGACAAAGAGAGATGCATGGGCTGGG ACCTTTGAGAGCTACTTCAAAATCCGGAAAACACCAAGAACTGACTGTCCAGAGAAGCTC CCAGAGGTGACGAAGTCATTGCGACCATTTGGTCCCAAGGAAGATTCGTCTCTCTCGGAA TTTCAAGTGGAGTTGATTCAACTTGCTTCACAGCTCAACGGTGATCACGTACTGAACACG TACCCAGATATTGGCAGGACCATGACTGTCGGGGAAGCAAACCGCTACGCAGAGGATGCT GTCGCCAGGTTCCTGGAAGCTGGTCGGATTGCTTTGAGAGCTGGTGCAAATGAATCTGCT TTGGTGACGATGAGGCCTGCTCTCACCAGCAGGGCCTCAATGTCCTCTGGTTTATCATCA GAGCTCTAG

Peptide Sequence

PEP ID	Zm00001d034714_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:300523648:300526443:1 gene:Zm00001d034714 transcript:Zm00001d034714_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific phospholipase C1
Sequence	MAAVARRGPGARLLAALLLLALVVSGHCLDAHHRGLKRRRRKHEIHSPVKTVVVVVMENR SFDHILGWLRRTRPDIDGLTGRESNRLNASDPASPEIFVTDEAGYVDSDPGHGFEDIREQ IFGSADTSAVPPPMSGFAQNARGMGLGMPQNVMSGFKPDAVPIYASLADDFAVFDRWFAS VPTSTQPNRLFVHSATSHGLTFNARKDLIHGFPQKTIFDSLEENGLSFGIYYQNIPATLF YQSLRRLKHLIKFHQYSLKFKLHAKLGKLPNYVVIEQRYFDCEMFPANDDHPSHDVARGQ RFVKEVYETLRASPQWNETALIITYDEHGGFYDHVPTPVVGVPQPDGIVGPDPYYFKFER LGVRVPTFLISPWIEKGTVIHEPNGPQDTSQYEHSSIPATVKKLFNLHSNFLTKRDAWAG TFESYFKIRKTPRTDCPEKLPEVTKSLRPFGPKEDSSLSEFQVELIQLASQLNGDHVLNT YPDIGRTMTVGEANRYAEDAVARFLEAGRIALRAGANESALVTMRPALTSRASMSSGLSS EL

Transcript Sequence

Transcript ID	Zm00001d034714_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:300523648:300526443:1 gene:Zm00001d034714 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific phospholipase C1
Sequence	GCCGCCGCCCGTACGCAGAAGCAAAGCAACTGCTTAAATTGAAAAAGAAAGGAAGGAAAA AAAACAGAGAGCTCACCAATTCAACTGAACAGCAAGCGCACCTACCCTACCTGCAAGCGC ACCGCCCGCCGTCGAAGGCGAAGACCTAGTTCCCGGTCCGTCGCGATGGCTGCCGTGGCC CGCCGCGGCCCCGGGGCGCGCCTCCTCGCGGCGCTCCTCCTGCTGGCGCTGGTCGTCTCC GGGCACTGCCTGGACGCGCACCACCGCGGGCTGAAGCGCCGGCGGCGGAAGCACGAGATC CATTCCCCGGTCAAGACGGTGGTGGTGGTGGTGATGGAGAACCGCAGCTTCGACCACATC CTCGGCTGGCTCCGCCGCACCCGCCCCGACATCGACGGCCTCACGGGCCGCGAGTCGAAC CGCCTCAACGCCTCCGACCCCGCATCCCCGGAGATCTTCGTCACCGACGAGGCCGGCTAC GTAGACTCCGACCCCGGCCACGGCTTCGAGGACATCCGGGAGCAGATCTTCGGCTCCGCC GACACCTCCGCGGTGCCGCCCCCAATGTCCGGATTCGCCCAGAACGCGCGCGGCATGGGC CTCGGCATGCCGCAGAACGTCATGAGCGGCTTCAAGCCCGACGCCGTCCCCATCTACGCC TCCCTCGCCGACGACTTCGCCGTGTTCGACCGCTGGTTCGCCTCCGTGCCCACCTCCACG CAGCCCAACCGCCTGTTCGTCCACTCGGCGACCTCCCACGGCCTCACCTTTAACGCCCGC AAGGACCTCATCCATGGTTTCCCGCAGAAGACCATCTTTGACAGCCTCGAGGAGAATGGC CTGTCTTTTGGCATCTACTACCAGAACATCCCGGCCACGCTCTTCTACCAGAGCCTCCGC CGCCTAAAGCACCTCATTAAGTTCCACCAGTACAGCCTCAAGTTCAAGTTGCACGCCAAG TTGGGGAAGCTGCCAAATTATGTGGTGATTGAACAAAGGTACTTTGATTGCGAGATGTTC CCAGCAAACGATGATCATCCCTCGCATGATGTGGCAAGGGGACAGAGGTTCGTCAAAGAG GTGTATGAAACACTGAGAGCCAGTCCGCAGTGGAACGAGACGGCCCTGATTATCACATAT GATGAGCATGGTGGATTCTATGACCATGTACCTACGCCGGTCGTTGGAGTGCCCCAGCCT GATGGAATAGTTGGGCCTGATCCATACTACTTCAAGTTCGAACGGCTTGGGGTGCGTGTT CCCACCTTTCTCATCTCACCTTGGATAGAGAAGGGCACTGTGATCCATGAACCAAATGGT CCACAGGATACCTCGCAATATGAGCATTCGTCCATCCCTGCAACAGTAAAGAAGCTATTC AATTTACATTCTAACTTTCTGACAAAGAGAGATGCATGGGCTGGGACCTTTGAGAGCTAC TTCAAAATCCGGAAAACACCAAGAACTGACTGTCCAGAGAAGCTCCCAGAGGTGACGAAG TCATTGCGACCATTTGGTCCCAAGGAAGATTCGTCTCTCTCGGAATTTCAAGTGGAGTTG ATTCAACTTGCTTCACAGCTCAACGGTGATCACGTACTGAACACGTACCCAGATATTGGC AGGACCATGACTGTCGGGGAAGCAAACCGCTACGCAGAGGATGCTGTCGCCAGGTTCCTG GAAGCTGGTCGGATTGCTTTGAGAGCTGGTGCAAATGAATCTGCTTTGGTGACGATGAGG CCTGCTCTCACCAGCAGGGCCTCAATGTCCTCTGGTTTATCATCAGAGCTCTAGTAGATT GCTCCGGTCTACCCATAAACTACACATTGGCATTCGCTCTGATTCAGCTGTGGCTGAATC AGAGCTCTTGTGTAACGTGGTAAGAGAGCCTACCACTTGGCGGTGTAGTGCAAATATGAT ACTATAGCATCATGTAACAGACAGCATGGTTTTGTAAATAGACGTCATGATATTGGACAT CTGGATTCTGATACAGTATATGTCGAAGTCCCCTCCTGGATAGTGTGTAGTGGGGATTTC TAAAGCATTGTGGAATTGTACCTATTCTGTATTCAGTCTGTATTTTACTGTACTGTACCT GCTTGTCAAGCAGCTGAACTGCACTTTGGAGTGATGTATCATATGCTACTTAAACAAATA TGTTTATGTGCC