Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034710_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:1:300423290:300426735:1 gene:Zm00001d034710 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 330 description:Zinc finger CCCH domain-containing protein 42
Sequence

ATGAATCCCCTCACGCAGGTGAAGCGGACGCAGATTATCAACCAGAAGGAGGCGCTCCTG
GGCATCGGCGAGGACGCGTCGTGGCACGCCAAGTTTAAGGACTCGGCCTACGTCTACGTC
GGCGGCGTCCCCTTCGACCTCACCGAGGGCGACCTCCTCGCCATCTTTGCGCAGTATGGT
GAGGTTGTCGACGTGAACCTCGTGCGCGACAAGGGCACCGGAAAATCCAAGGGGTTCGCG
TTCCTCGCGTACGAGGACCAGAGAAGCACGATTCTTGCTGTTGACAATTTGAATGGAGCT
AAAGTTCTTGGGAGGATCATAAAGGTTGACCATGTGAGCAAGTACAAGAAGAAGGAAGAG
GAAGATGAGGAGGAGCTGCAGAAGAAGAGGGAGGCCCGTGGAGTCTGCTATGCTTTCCAG
AAAGGCGAGTGCAACCGCGGAGCTTCCTGCAGATATTCACATGATGAGCAGAGAAATGCA
AACACCGGTTGGGGTTCTAAAGAGGATAGTGGTGCACGATGGGAGCATGACAAACACAGT
GATGTACCGAAGAGTCGAGGCATGTGCTATGCTTTCCAGAAGGGAGAGTGCAACCGTGGA
GCATCCTGCAAATTTTTGCATGACGAGCAGAGAAATGCAAACAGTCGTCGGGACTCTAGG
GATGGTGGACCATCGAGATCAGAGCGGTATGGAGACCGAGAATCTAGGAGTAGGCATGAT
GATAGAAGAGCAGAAGATCGGGACAGATTCAGGCGTGACAACTCACCTGAGAGATCACGA
GGTGAGAGGCAGAGGGACGATGACAGATCCGACAGAGGAAGAGAAGCAAAATCAGAAAGA
CGCAGATATGATGTGGAACATGAGGATCGCAAGCGGTCAAGGCACGGCAGAGAGTGA

Peptide Sequence

PEP ID

Zm00001d034710_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:1:300423290:300426735:1 gene:Zm00001d034710 transcript:Zm00001d034710_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 330 description:Zinc finger CCCH domain-containing protein 42
Sequence

MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYG
EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEE
EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEDSGARWEHDKHS
DVPKSRGMCYAFQKGECNRGASCKFLHDEQRNANSRRDSRDGGPSRSERYGDRESRSRHD
DRRAEDRDRFRRDNSPERSRGERQRDDDRSDRGREAKSERRRYDVEHEDRKRSRHGRE

Transcript Sequence

Transcript ID

Zm00001d034710_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:300423290:300426735:1 gene:Zm00001d034710 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 330 description:Zinc finger CCCH domain-containing protein 42
Sequence

AATCCGCCGCTGTTCGAGTAGTCGGCGGCGCGGCGCCGGCGGCCGGGGCGGCGGCGATGA
ATCCCCTCACGCAGGTGAAGCGGACGCAGATTATCAACCAGAAGGAGGCGCTCCTGGGCA
TCGGCGAGGACGCGTCGTGGCACGCCAAGTTTAAGGACTCGGCCTACGTCTACGTCGGCG
GCGTCCCCTTCGACCTCACCGAGGGCGACCTCCTCGCCATCTTTGCGCAGTATGGTGAGG
TTGTCGACGTGAACCTCGTGCGCGACAAGGGCACCGGAAAATCCAAGGGGTTCGCGTTCC
TCGCGTACGAGGACCAGAGAAGCACGATTCTTGCTGTTGACAATTTGAATGGAGCTAAAG
TTCTTGGGAGGATCATAAAGGTTGACCATGTGAGCAAGTACAAGAAGAAGGAAGAGGAAG
ATGAGGAGGAGCTGCAGAAGAAGAGGGAGGCCCGTGGAGTCTGCTATGCTTTCCAGAAAG
GCGAGTGCAACCGCGGAGCTTCCTGCAGATATTCACATGATGAGCAGAGAAATGCAAACA
CCGGTTGGGGTTCTAAAGAGGATAGTGGTGCACGATGGGAGCATGACAAACACAGTGATG
TACCGAAGAGTCGAGGCATGTGCTATGCTTTCCAGAAGGGAGAGTGCAACCGTGGAGCAT
CCTGCAAATTTTTGCATGACGAGCAGAGAAATGCAAACAGTCGTCGGGACTCTAGGGATG
GTGGACCATCGAGATCAGAGCGGTATGGAGACCGAGAATCTAGGAGTAGGCATGATGATA
GAAGAGCAGAAGATCGGGACAGATTCAGGCGTGACAACTCACCTGAGAGATCACGAGGTG
AGAGGCAGAGGGACGATGACAGATCCGACAGAGGAAGAGAAGCAAAATCAGAAAGACGCA
GATATGATGTGGAACATGAGGATCGCAAGCGGTCAAGGCACGGCAGAGAGTGATGCCATG
AAAGAAGTGTTTACAAAGAACACAAATGGTGCAAGAGGCCGTGGGGGATTGACGTTTGTA
CTCTTAAATTGCAACACAACCAGTGCTGTTAAATTTTGATATTTGAATGTAGTTGCCTTC
GGCTGCTGCTCGTGCTGCTGCTTTATTCAGATAAGTTTCTTTATATGCCTCCATTTGATT
ACATCTGGTGTTCTTTTTCGCTCTTCAGATCGGTGTCATTTTTAGTTATCATCACTGAAA
CCGTCTGACTGGATTGTGTTGGTGCCAATTGCGTGGTTTTTGCCGAGGAAGTTGTTTACT
GGTTAATCTTCAGCTAGGATGGTGGGCGCGCCTCCGCAAGGACCACAATGCCTGTTCTGG
CTACGCGCTGATGAACAATGAAAATGATGCTGTATTTTGCAGAACCACTGTTACCTGCAA
CAGCATCAGCAGCAGCATGTGCAACCCAAAAGGAGCCGTATTCCCCAGTAGAAATTTTGT
ACTGGACAGAGGCACGGTTCCAAAAGGTTCGGCCCTAAAAATTGCTCTGCAATGTCAGTG
GTCCAGCGTAGATGATGATGATCGCTTCTAACATAGTCTATAAAAAATGCATACTGGAGA
TTTGGTACTAGATAACAAGAGGACCTTGAGTACCGAGTTTTTTCCGGTGAAAGATTGATG
GGCGATGCCACAGCCTGAAGACGAAGAGGATGTAAAGAAAAAAACTCGCCAATTAAGGGC
TTGTTCGGTTATTCCTATCCCATATGGATTGGATGAGATTGGAAAAAATTGTGAAAGATT
TTGACTTGTTTGGGATTGAAACCCATCCAATCCCACCCAATCCACATGGATTGAGAGCAA
AACGAACAAGCCCTAAGAATTGATGATGTTGTAGTACAAATTCCAGGCCTTCGGTTGATT
TTCTAAGAGTTAGTTTGGTTAATTT