Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034670_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:1:299438367:299441658:1 gene:Zm00001d034670 gene_biotype:protein_coding transcript_biotype:protein_coding description:hAT transposon superfamily
Sequence	ATGCAGCAGCGTTCGTGCTCTTGCCTGATGGAGAGGGACGCGGTTCTGGAGGACGCGGCG GCGGGGGATGGGGAGGAGCAGGACCAGGACCAGGAAGAGGTGGTGGTGCCGATCGGAGCG CAGAAGCACGATCCGGCGTGGAAGCACTGCGTCATGGTGCGCTCCGACGGCCGGATGCGC CTCAAGTGCGCCTACTGCGGCAAGCACTTTCTCGGCGGTGGTATCCACCGCTTCAAGGAG CACCTGGCCCGCCGCCCCGGGAACGCCTGCTGCTGCCCCAGTGTGCCCCGCGACGTCCAG GACACCATGCTCCGCAGCCTCGCCGCCGTCGCTGCCAAGAAGATGCAGCGCAAGCTCGCC GCCGCCAGCACGACGCCCGCCTCTGTCTCTACGGCTAGCGGGGGTACCGGCAGCCCCATC CACATGATCTCGCTCAACGAGGTGCTCGACTTCGAGGCCGTGCCGCTCGAGGAGCAGAGG CCTCCGGTTCCGGAGGGCAGCATTAGGGGGAGTACCAGCGGTAAGAAGAAGAGGAAGCAG GTGACCTACGCCCCTGCTCCGCCACTTATACCCCAGATCCGGCCGCAGCATGTTCGGTCT ACCCCTCAGAACAATCTTCTTCACGGGCTGCAGCATGTTCCGCCTACTCCTCAGACCAAC CCTCTTCATCAGGTTGTCATGGCAGTGAACGCAGTGACACCAGCAGAGCATTTCGAACAT GCTGCCCCCTCGGAGAAGGAGCATGTTTCCGTGGCAGTTGGGAGGTTCTTGTATGACGCC GGTGTGCCATTGGAAGCGGTGAACTCGGTCTACTTCCAACCGATGCTCGAGGCCATTGCG GCGGCAGGGGGGAGGCCTGAGACGCTCTCGTACCATGACTTTCGCGGTCACATTCTTAAG AGGTCACTCGACGACGTGACGGCTCGCTTGGAGTTCTTCAGGGGGTCATGGACCAGGACG GGCTGCTCGGTGTTGGCTGACGAGTGGATCACTGATAAAGGCAGAACCTTGATAAACTTC TCCGTGTATTGCCCGGAAGGTACTATGTTCCTCAAGTCGGTGGATGCAACCAGCATCGTC ACATCTTCAGATGCACTGTACGAGCTACTAAAAAGTGCAGTCGAGGAAATTGGCGAGAAA AAAGTTGTCCAGGTTATCACAAACAATTCTGAGGTCCATGCAGCTGCCGGAAAAAAGCTA GGTGAAACATTCCCCACATTGTTCTGGTCTCCATGCACTTTCCAGTGTGTTGATGGCATG CTCGAAGATTTCAGTAAGGTGGAGGCAATTAGTGAGATAATAAGTAATGCAAAGGCCATT ACGGGATTTGTCTACAACAGCGCATATGCGTTGAATCTGATGAAGAAGTATCTGCAAGGG AAGGATCTGCTGGTTCCTGCGGAGACTCGTGCGGCTATGAACTTTGTGACGTTGAAGAAT ATGTACGGTTTGAGGGAGGCTTTGCAAGCTATGGTCAACTCGGATGAATGGATAGACTTG TTGCCAAAGAAAGGAGGGATTGAAGCAAGCAATCTTGTTAATAATTTGCAGTTTTGGAAC TCCTGTGCTGCCGTCGTTCACATCACTGAGCAACTTGTGCACCTTCTTAAGCTAGTCGGT AACCCCAAGAGGCCTTCTATGGGTTATGTATATGCTGGACTGTACAAGGCAAAAGCAGCA ATCAAAAAAGAGCTGGTGAGTAAGAACGATTACATGGTTTACTGGAATATTATCGACTGG AGGTGGGACAACCAGACACCACAGCCACTTCATTCAGCTGGTTTCTTCCTGAACCCTCTA TTTTTTGATGGAATTCGAGGTGACATATCAAATGGAATATTCTCAGGAATGCTAGACTGC ATAGAAAGGCTGGTACCTGATGTGAAAATCCAAGATAAAGTACAGCGAGAGCTCCACATA TACCGGAGTGAAACAGCAGTGGATTTTCGTAGGCAGATGGCTGTCCGATCTAGACGAACT TTACCTCCTGCTGAATGGTGGTATACATATGGAGGAGCTTGCCCAAATTTAACACGTCTA GCGGTCCGTATTCTCAGTCAAACCTGCAGCGCAAGAGGATGTGACCGGACGAACATTCAT TTTGAACAAGTTCATGATGAAAGAATGAATAGTTTTGAGCGTCAGCGAATGCATGACCTC ACCTTTGTACAATACAACCTACGGCTTCAGCAAAGACAACAACACAAGGCGAAAGCGTTT GATCCTCTCTCTGTGGACTACATAGACGTAGTCGATGATTGGGCTGTGGATAGACCTGCA ATGTTCTCTGGCCCAGCTGAGCAGCCAAACTGGATGGAGATTAATCAATCAGGCAACCGA ATGACATCAAGGGAACCAACTGAAGATGAATTCGAATCCTTCATTGAAGGAGTTGATGAC GAAATGATCCAAGGTGCTGCACAGGGCTTCCATGAAGATGGTGATGATCCTGCTTGTGGC TGA

Peptide Sequence

PEP ID	Zm00001d034670_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:1:299438367:299441658:1 gene:Zm00001d034670 transcript:Zm00001d034670_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:hAT transposon superfamily
Sequence	MQQRSCSCLMERDAVLEDAAAGDGEEQDQDQEEVVVPIGAQKHDPAWKHCVMVRSDGRMR LKCAYCGKHFLGGGIHRFKEHLARRPGNACCCPSVPRDVQDTMLRSLAAVAAKKMQRKLA AASTTPASVSTASGGTGSPIHMISLNEVLDFEAVPLEEQRPPVPEGSIRGSTSGKKKRKQ VTYAPAPPLIPQIRPQHVRSTPQNNLLHGLQHVPPTPQTNPLHQVVMAVNAVTPAEHFEH AAPSEKEHVSVAVGRFLYDAGVPLEAVNSVYFQPMLEAIAAAGGRPETLSYHDFRGHILK RSLDDVTARLEFFRGSWTRTGCSVLADEWITDKGRTLINFSVYCPEGTMFLKSVDATSIV TSSDALYELLKSAVEEIGEKKVVQVITNNSEVHAAAGKKLGETFPTLFWSPCTFQCVDGM LEDFSKVEAISEIISNAKAITGFVYNSAYALNLMKKYLQGKDLLVPAETRAAMNFVTLKN MYGLREALQAMVNSDEWIDLLPKKGGIEASNLVNNLQFWNSCAAVVHITEQLVHLLKLVG NPKRPSMGYVYAGLYKAKAAIKKELVSKNDYMVYWNIIDWRWDNQTPQPLHSAGFFLNPL FFDGIRGDISNGIFSGMLDCIERLVPDVKIQDKVQRELHIYRSETAVDFRRQMAVRSRRT LPPAEWWYTYGGACPNLTRLAVRILSQTCSARGCDRTNIHFEQVHDERMNSFERQRMHDL TFVQYNLRLQQRQQHKAKAFDPLSVDYIDVVDDWAVDRPAMFSGPAEQPNWMEINQSGNR MTSREPTEDEFESFIEGVDDEMIQGAAQGFHEDGDDPACG

Transcript Sequence

Transcript ID	Zm00001d034670_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:299438367:299441658:1 gene:Zm00001d034670 gene_biotype:protein_coding transcript_biotype:protein_coding description:hAT transposon superfamily
Sequence	ATTTCGGGTTCTTCTGGTTTATCTCGCTCCCGCCCCCGGGCATCGGCTGATTGGGGATTT AGTAGGACACGCGAATCCAATTGTGCCGTTCCTGACGCTGACGCCCGGCGGTGATGGCTG ATGCAGCAGCGTTCGTGCTCTTGCCTGATGGAGAGGGACGCGGTTCTGGAGGACGCGGCG GCGGGGGATGGGGAGGAGCAGGACCAGGACCAGGAAGAGGTGGTGGTGCCGATCGGAGCG CAGAAGCACGATCCGGCGTGGAAGCACTGCGTCATGGTGCGCTCCGACGGCCGGATGCGC CTCAAGTGCGCCTACTGCGGCAAGCACTTTCTCGGCGGTGGTATCCACCGCTTCAAGGAG CACCTGGCCCGCCGCCCCGGGAACGCCTGCTGCTGCCCCAGTGTGCCCCGCGACGTCCAG GACACCATGCTCCGCAGCCTCGCCGCCGTCGCTGCCAAGAAGATGCAGCGCAAGCTCGCC GCCGCCAGCACGACGCCCGCCTCTGTCTCTACGGCTAGCGGGGGTACCGGCAGCCCCATC CACATGATCTCGCTCAACGAGGTGCTCGACTTCGAGGCCGTGCCGCTCGAGGAGCAGAGG CCTCCGGTTCCGGAGGGCAGCATTAGGGGGAGTACCAGCGGTAAGAAGAAGAGGAAGCAG GTGACCTACGCCCCTGCTCCGCCACTTATACCCCAGATCCGGCCGCAGCATGTTCGGTCT ACCCCTCAGAACAATCTTCTTCACGGGCTGCAGCATGTTCCGCCTACTCCTCAGACCAAC CCTCTTCATCAGGTTGTCATGGCAGTGAACGCAGTGACACCAGCAGAGCATTTCGAACAT GCTGCCCCCTCGGAGAAGGAGCATGTTTCCGTGGCAGTTGGGAGGTTCTTGTATGACGCC GGTGTGCCATTGGAAGCGGTGAACTCGGTCTACTTCCAACCGATGCTCGAGGCCATTGCG GCGGCAGGGGGGAGGCCTGAGACGCTCTCGTACCATGACTTTCGCGGTCACATTCTTAAG AGGTCACTCGACGACGTGACGGCTCGCTTGGAGTTCTTCAGGGGGTCATGGACCAGGACG GGCTGCTCGGTGTTGGCTGACGAGTGGATCACTGATAAAGGCAGAACCTTGATAAACTTC TCCGTGTATTGCCCGGAAGGTACTATGTTCCTCAAGTCGGTGGATGCAACCAGCATCGTC ACATCTTCAGATGCACTGTACGAGCTACTAAAAAGTGCAGTCGAGGAAATTGGCGAGAAA AAAGTTGTCCAGGTTATCACAAACAATTCTGAGGTCCATGCAGCTGCCGGAAAAAAGCTA GGTGAAACATTCCCCACATTGTTCTGGTCTCCATGCACTTTCCAGTGTGTTGATGGCATG CTCGAAGATTTCAGTAAGGTGGAGGCAATTAGTGAGATAATAAGTAATGCAAAGGCCATT ACGGGATTTGTCTACAACAGCGCATATGCGTTGAATCTGATGAAGAAGTATCTGCAAGGG AAGGATCTGCTGGTTCCTGCGGAGACTCGTGCGGCTATGAACTTTGTGACGTTGAAGAAT ATGTACGGTTTGAGGGAGGCTTTGCAAGCTATGGTCAACTCGGATGAATGGATAGACTTG TTGCCAAAGAAAGGAGGGATTGAAGCAAGCAATCTTGTTAATAATTTGCAGTTTTGGAAC TCCTGTGCTGCCGTCGTTCACATCACTGAGCAACTTGTGCACCTTCTTAAGCTAGTCGGT AACCCCAAGAGGCCTTCTATGGGTTATGTATATGCTGGACTGTACAAGGCAAAAGCAGCA ATCAAAAAAGAGCTGGTGAGTAAGAACGATTACATGGTTTACTGGAATATTATCGACTGG AGGTGGGACAACCAGACACCACAGCCACTTCATTCAGCTGGTTTCTTCCTGAACCCTCTA TTTTTTGATGGAATTCGAGGTGACATATCAAATGGAATATTCTCAGGAATGCTAGACTGC ATAGAAAGGCTGGTACCTGATGTGAAAATCCAAGATAAAGTACAGCGAGAGCTCCACATA TACCGGAGTGAAACAGCAGTGGATTTTCGTAGGCAGATGGCTGTCCGATCTAGACGAACT TTACCTCCTGCTGAATGGTGGTATACATATGGAGGAGCTTGCCCAAATTTAACACGTCTA GCGGTCCGTATTCTCAGTCAAACCTGCAGCGCAAGAGGATGTGACCGGACGAACATTCAT TTTGAACAAGTTCATGATGAAAGAATGAATAGTTTTGAGCGTCAGCGAATGCATGACCTC ACCTTTGTACAATACAACCTACGGCTTCAGCAAAGACAACAACACAAGGCGAAAGCGTTT GATCCTCTCTCTGTGGACTACATAGACGTAGTCGATGATTGGGCTGTGGATAGACCTGCA ATGTTCTCTGGCCCAGCTGAGCAGCCAAACTGGATGGAGATTAATCAATCAGGCAACCGA ATGACATCAAGGGAACCAACTGAAGATGAATTCGAATCCTTCATTGAAGGAGTTGATGAC GAAATGATCCAAGGTGCTGCACAGGGCTTCCATGAAGATGGTGATGATCCTGCTTGTGGC TGAGGCTATATAGATTGACAGCCAGTTAACCTGTAAGCTAATGTTGCATGGCTAAAATCT GGGGTTGCCTGCTGTATTTTTTCGAAACAAGGCCATCTTATTGTGTATCTTATACTTGGT GTCTATTTGGGCTAGTTGTAGAGATATTTTAGTGTCCAGATATCTTCCCGAGTCCATCGT TGGTCTACGACACACATTTTTGTCACAATAAAGTTTGAGGTTTCAGTTCCTGGGCCATTT TTAAAGATATTTTAGGGGGTGTTTGGTTTAC