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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034663_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:299194181:299196764:-1 gene:Zm00001d034663 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alpha-expansin4 description: alpha-expansin4
Sequence

ATGGCGGCAATGCCGGCGCCGCTTCTGCCTCTGCTTCTGCTGGTGGTGGCCGCGGCGATG
ACGCTCTCCCCCGCCGCCGCCCGCATTCCCGGCGTGTACGTCGGCGGCGGCGGCGGCTGG
CAGAGCGCGCACGCCACGTTCTACGGCGGCAGCGACGCTTCGGGCACCATGGGCGGCGCC
TGCGGGTACGGCAACCTGTACAGCCAGGGGTACGGCGTGAACAACGCGGCGCTGAGCACG
GCGCTGTTCGACGAGGGGCTCCGCTGCGGCGCGTGCTTCGAGATCAGGTGCGAGGAGCAG
CCCGGGTGGCGGTGGTGCCGGCCAGGGAGGCCCTCCATCCTGGTCACGGCCACCAACTTC
TGCCCGCCAAACTACGCGCTCCCCTCCGACGACGGCGGCTGGTGCAACCCGCCCCGCCCG
CACTTCGACCTCGCCATGCCCATGTTCCTCCACATCGCCGAGTACCGCGCCGGCATCGTC
CCCGTCTCCTACCGCCGGGTGCCGTGCCGCAAGTCCGGCGGGGTGCGGTTCACCATCAAC
GGCTTCCGGTACTTCAACCTGGTGCTGATCACGAACGTGGCCGGCGCGGGGGACGTGGTG
CGCGCGAGCGTCAAGGCGGCCAGCACCGGGTGGCTGCCCATGTCCAGGAACTGGGGCCAG
AACTGGCAGTCCAACGCCATCCTCGTCGGCCAGGCGCTCTCCTTCCGCGTCACCGCCAGC
GACCGCCGCACCTCCACCTCCTGGAACGCCGCCCCGAGCACCTGGCAGTTCGGCCAGACC
TTCGAGGGCAAGAACTTCAGGGTCTGA

Peptide Sequence

PEP ID

Zm00001d034663_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:299194181:299196764:-1 gene:Zm00001d034663 transcript:Zm00001d034663_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alpha-expansin4 description: alpha-expansin4
Sequence

MAAMPAPLLPLLLLVVAAAMTLSPAAARIPGVYVGGGGGWQSAHATFYGGSDASGTMGGA
CGYGNLYSQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVTATNF
CPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTIN
GFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQALSFRVTAS
DRRTSTSWNAAPSTWQFGQTFEGKNFRV

Transcript Sequence

Transcript ID

Zm00001d034663_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:299194181:299196764:-1 gene:Zm00001d034663 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:alpha-expansin4 description: alpha-expansin4
Sequence

GCCCCTCCCCACACCTCCGCTCCCGGCCTGTGCCGCCGTCGCCACCGCTCGCTCGCCCGC
CTGCCTGCCTGCCTGGGCCCGCAGCACCGACTCTGACAGCGCCCGTCCTGCTTCCTGTAC
CGGCAGGCGAGGGAGAGGACTCAGGGAGTGTGATGGCGGCAATGCCGGCGCCGCTTCTGC
CTCTGCTTCTGCTGGTGGTGGCCGCGGCGATGACGCTCTCCCCCGCCGCCGCCCGCATTC
CCGGCGTGTACGTCGGCGGCGGCGGCGGCTGGCAGAGCGCGCACGCCACGTTCTACGGCG
GCAGCGACGCTTCGGGCACCATGGGCGGCGCCTGCGGGTACGGCAACCTGTACAGCCAGG
GGTACGGCGTGAACAACGCGGCGCTGAGCACGGCGCTGTTCGACGAGGGGCTCCGCTGCG
GCGCGTGCTTCGAGATCAGGTGCGAGGAGCAGCCCGGGTGGCGGTGGTGCCGGCCAGGGA
GGCCCTCCATCCTGGTCACGGCCACCAACTTCTGCCCGCCAAACTACGCGCTCCCCTCCG
ACGACGGCGGCTGGTGCAACCCGCCCCGCCCGCACTTCGACCTCGCCATGCCCATGTTCC
TCCACATCGCCGAGTACCGCGCCGGCATCGTCCCCGTCTCCTACCGCCGGGTGCCGTGCC
GCAAGTCCGGCGGGGTGCGGTTCACCATCAACGGCTTCCGGTACTTCAACCTGGTGCTGA
TCACGAACGTGGCCGGCGCGGGGGACGTGGTGCGCGCGAGCGTCAAGGCGGCCAGCACCG
GGTGGCTGCCCATGTCCAGGAACTGGGGCCAGAACTGGCAGTCCAACGCCATCCTCGTCG
GCCAGGCGCTCTCCTTCCGCGTCACCGCCAGCGACCGCCGCACCTCCACCTCCTGGAACG
CCGCCCCGAGCACCTGGCAGTTCGGCCAGACCTTCGAGGGCAAGAACTTCAGGGTCTGAT
GCATGGGATGGGATGCGATGGGATGGGACTTGGGAGAAGAAGCCAAAACTCTTTTCTTTC
TTTCTTTCTTTCTTCTTATACGTAATTATTACTACTCACTCCTGCTACCGTACTACTGCT
ACTGGAGTACTAAGCGCGTGTTACTGTGTTAGAGGGTGGTGGGTGTTGTCAATGCCTGTT
TTAAGGTCACGCCTTCCGCCCGCCTTAATCCCAGGTCCAGGTCCTCTCTGAAAAAATGGA
GTCTTTTCTTCTGAACAAGATGTGTGGATGGGATTCTCTAGAGTTTGTCAGGGTATATTG
CCGTCTCTTCGGTCCCTAGCACTTCTCTATGCATCAAGTTTGTGCCTTTGGCTTGGGGGT
G