Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034627_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:1:298408163:298411932:-1 gene:Zm00001d034627 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 15 description:PHD finger protein ALFIN-LIKE 2
Sequence

ATGTGGACGATTTCTGCAGCTTCTGCGACCCAGGTGAATAAGGAGAACTTGTGTCTCTAC
GGCCTTCCCAACGGTAGCTGGGAGGTCTCGCCGCCGGCGGACGAGGTTCCTCCGGAGTTG
CCCGAGCCGGCGCTCGGCATCAACTTTGCGCGCGATGGCATGCAGCGCCGCGACTGGCTC
TCACTCGTCGCGGTCCACTCTGACTCGTGGCTCATCTCAGTCGCCTTCTTCTACGGCGCC
CGCCTCAACGCCAACGACCGGAAGCGCTTATTCAGCATGATCAGTGATCTTCCTTCTGTC
TTTGAAGCATTTGCGGACAGGAAACACGTCAGGGATAGGTCTGGCGTTGATAGCAGCGGC
AAGTCCAGGCACTCATCAAAGAGAGGAAACGATGGCCATGCGAAGAACTCCAGGGCAGCA
GCTCCTGCTGCCAAAGAGTACGACGACGACGATGACGAGGAGGACGAGGAACACACGGAA
ACCTTTTGTGGAAGCTGCGGCGGCCTCTACAACGCGAACGAGTTCTGGATCGGCTGCGAC
ATCTGCGAGCGGTGGTTCCACGGGAAGTGCGTGCGGATCACCCCTGCCAAAGCGGACCAC
ATAAAGCACTACAAGTGCCCGGACTGCAGCTCGAAGAAAATAAGGCAGTAG

Peptide Sequence

PEP ID

Zm00001d034627_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:1:298408163:298411932:-1 gene:Zm00001d034627 transcript:Zm00001d034627_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 15 description:PHD finger protein ALFIN-LIKE 2
Sequence

MWTISAASATQVNKENLCLYGLPNGSWEVSPPADEVPPELPEPALGINFARDGMQRRDWL
SLVAVHSDSWLISVAFFYGARLNANDRKRLFSMISDLPSVFEAFADRKHVRDRSGVDSSG
KSRHSSKRGNDGHAKNSRAAAPAAKEYDDDDDEEDEEHTETFCGSCGGLYNANEFWIGCD
ICERWFHGKCVRITPAKADHIKHYKCPDCSSKKIRQ

Transcript Sequence

Transcript ID

Zm00001d034627_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:298408163:298411932:-1 gene:Zm00001d034627 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 15 description:PHD finger protein ALFIN-LIKE 2
Sequence

GCAAGGCAGCCGAATCCCAACTCCTGTGTGTGCCTGCCAACGCCTCGTCGCCCGCCGCCG
CCGCTGCTTCGCCCCTCTCCGCCAGCCGCTCCCGCTCGGAGCACGCCGCCGCCGGCGTGG
GCGCGCACCGACGGCCGTCGTGTCGCATGGATATGGCCCCCGCGGCCGTCTCCTCCAACC
CGCGCTCGGTCGAGGAAATCTTCAAAGACTTCTCCGGCCGGCGCGCGGGGCTCGTCCGCG
CCCTCACCTCCGATGTGGACGATTTCTGCAGCTTCTGCGACCCAGGTGAATAAGGAGAAC
TTGTGTCTCTACGGCCTTCCCAACGGTAGCTGGGAGGTCTCGCCGCCGGCGGACGAGGTT
CCTCCGGAGTTGCCCGAGCCGGCGCTCGGCATCAACTTTGCGCGCGATGGCATGCAGCGC
CGCGACTGGCTCTCACTCGTCGCGGTCCACTCTGACTCGTGGCTCATCTCAGTCGCCTTC
TTCTACGGCGCCCGCCTCAACGCCAACGACCGGAAGCGCTTATTCAGCATGATCAGTGAT
CTTCCTTCTGTCTTTGAAGCATTTGCGGACAGGAAACACGTCAGGGATAGGTCTGGCGTT
GATAGCAGCGGCAAGTCCAGGCACTCATCAAAGAGAGGAAACGATGGCCATGCGAAGAAC
TCCAGGGCAGCAGCTCCTGCTGCCAAAGAGTACGACGACGACGATGACGAGGAGGACGAG
GAACACACGGAAACCTTTTGTGGAAGCTGCGGCGGCCTCTACAACGCGAACGAGTTCTGG
ATCGGCTGCGACATCTGCGAGCGGTGGTTCCACGGGAAGTGCGTGCGGATCACCCCTGCC
AAAGCGGACCACATAAAGCACTACAAGTGCCCGGACTGCAGCTCGAAGAAAATAAGGCAG
TAGGTCCCAGTGTGCACCGCCGGCCATCGCTGACCTGTCTGATCCCAAACCATACTCCAT
TGCTTGCCTGCCTTGCCCCAAGGTCGCAGCTAGCAGATGCGAATTCCTTCATTTGTGGGG
GGTTGTTGTGTGATGGATAGCCTGGTAGGAAGAGGCAAAGGACTGATATATAATGACTCG
TTTATTGT