Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034606_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:297653338:297656301:1 gene:Zm00001d034606 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IWS1/SPN1-transcription factor 1 description:Transcription factor IIS protein
Sequence	ATGGAGAGGGAGCTACTGGAGACGTTCGATGCGGCCAAGAAGGCGGCCGACGCTACGGCA GGACAGGGCGACTCGCCGGAGGCTGGCCGCTGCCTCGACGCGCTGCACCGGCTGCGCGAC ATACGCGTCAACACCGACATCCTCGTCTCCACGCAGGTTGGCAAACGTCTTCGACCTCTT ACTAAGCACCCTCACTCGGGCATTCAGGCAGTCGCATCAGACCTTTTTGGGTACTGGAAA AAGGTTGTCCTTGAAGAGACAGGAAAGAAAAATGGGAGCTCAGAGAATGAAAAATCAATG GACTCTTCAGGAAAGGTTGAGAAGGTGAGGCCCATGAAGGTTGAAAAGAATTCTGCATCA GCAAGCATGAAGGTTGAGAAAAGAGATGTGGATGATAGGGGTCAGAAGCCTGACAATGTC AAAGTTGAGAAGACCGCTAGTAATGGTTCCAGAACTCAATCTGTGAAGGTAGAAAGGGTA TCCAAAGAAGTCAACAGAACTGATGCAAAGAAGCCAGCATCTGTCCCCAATGGTCCCCCA AAGCTTACATCTCTTGTCAAATGCAATGATCCTACCCGAGATAAAATCCGGGAACTCCTT GCTGAAGCCTTTGCAAAGGTTCCCAGAGAGACTAGTAATGATGACCGAGATGAAGTGAGA AACATCTTGGATGAAGTTGATGCATGCGACCCATTCAGAGTTGCTGTGACAGTAGAGTCT GCACTATTTGAGAGGTTTGGGCGTTCCACTGGGGCCCACAAGGCAAAATACAGGTCAATC ATGTTCAACCTGAGGGCTGAAAACAACACTGATTTTCGGAGAAGGGTTCTCATTGGTCAA GTGACCCCAGAGAGGCTTCCAGACATATCCCCTGATGAGATGGCTAGTGATGCAAGGAAG CAAGAGAATTTGCAGATCAAGGAGAAGGCTCTGTTTGACTGTGAGCGGGGAGCAGCACCA AAGGCAACAACGGATCAGTTCAAATGTGGCAGATGTGGACAGCGGAAGACAACTTACTAT CAGCTGCAGACTCGGAGTGCTGATGAACCAATGACGACATTCGTCACATGTGTGAACTGC AACAATCACTGGAAGTTCTGCTGA

Peptide Sequence

PEP ID	Zm00001d034606_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:297653338:297656301:1 gene:Zm00001d034606 transcript:Zm00001d034606_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IWS1/SPN1-transcription factor 1 description:Transcription factor IIS protein
Sequence	MERELLETFDAAKKAADATAGQGDSPEAGRCLDALHRLRDIRVNTDILVSTQVGKRLRPL TKHPHSGIQAVASDLFGYWKKVVLEETGKKNGSSENEKSMDSSGKVEKVRPMKVEKNSAS ASMKVEKRDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTDAKKPASVPNGPP KLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVES ALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASDARK QENLQIKEKALFDCERGAAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNC NNHWKFC

Transcript Sequence

Transcript ID	Zm00001d034606_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:297653338:297656301:1 gene:Zm00001d034606 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IWS1/SPN1-transcription factor 1 description:Transcription factor IIS protein
Sequence	TTTTTCTCTTTCCTCCTGCCTCCTGCAAGCCACGCGACGCCACACACAGGATAGCAGGGA CGGCGGCGCGGAGCTAGGGTTTTGATCCGCCACGCCGGCTAGGCTGCACCATCCCGACGA AGCCATGGAGAGGGAGCTACTGGAGACGTTCGATGCGGCCAAGAAGGCGGCCGACGCTAC GGCAGGACAGGGCGACTCGCCGGAGGCTGGCCGCTGCCTCGACGCGCTGCACCGGCTGCG CGACATACGCGTCAACACCGACATCCTCGTCTCCACGCAGGTTGGCAAACGTCTTCGACC TCTTACTAAGCACCCTCACTCGGGCATTCAGGCAGTCGCATCAGACCTTTTTGGGTACTG GAAAAAGGTTGTCCTTGAAGAGACAGGAAAGAAAAATGGGAGCTCAGAGAATGAAAAATC AATGGACTCTTCAGGAAAGGTTGAGAAGGTGAGGCCCATGAAGGTTGAAAAGAATTCTGC ATCAGCAAGCATGAAGGTTGAGAAAAGAGATGTGGATGATAGGGGTCAGAAGCCTGACAA TGTCAAAGTTGAGAAGACCGCTAGTAATGGTTCCAGAACTCAATCTGTGAAGGTAGAAAG GGTATCCAAAGAAGTCAACAGAACTGATGCAAAGAAGCCAGCATCTGTCCCCAATGGTCC CCCAAAGCTTACATCTCTTGTCAAATGCAATGATCCTACCCGAGATAAAATCCGGGAACT CCTTGCTGAAGCCTTTGCAAAGGTTCCCAGAGAGACTAGTAATGATGACCGAGATGAAGT GAGAAACATCTTGGATGAAGTTGATGCATGCGACCCATTCAGAGTTGCTGTGACAGTAGA GTCTGCACTATTTGAGAGGTTTGGGCGTTCCACTGGGGCCCACAAGGCAAAATACAGGTC AATCATGTTCAACCTGAGGGCTGAAAACAACACTGATTTTCGGAGAAGGGTTCTCATTGG TCAAGTGACCCCAGAGAGGCTTCCAGACATATCCCCTGATGAGATGGCTAGTGATGCAAG GAAGCAAGAGAATTTGCAGATCAAGGAGAAGGCTCTGTTTGACTGTGAGCGGGGAGCAGC ACCAAAGGCAACAACGGATCAGTTCAAATGTGGCAGATGTGGACAGCGGAAGACAACTTA CTATCAGCTGCAGACTCGGAGTGCTGATGAACCAATGACGACATTCGTCACATGTGTGAA CTGCAACAATCACTGGAAGTTCTGCTGAATGGCAGCCTGCTAAAATGTTTGTTTAGTTGC GCTGAGCACCCAGCTGTAATTTGTGCTCTGTTAGTTAGCTCTGCGACTCAAAGTTCAACA GGGCAGGCGGAACTCAGTTTTTTTTCCTAAACTAGGAGCCGTTATACTCTTCCTCTGTTA GTCGCTCTTTGTGATTCTGATTCATTCAGATTGTACTACTTGAACGCATAAATGTTGTAA ACTTGATCATATCATCACCAGCTGTACCTTAAGTTTTGGATGGCTATGTGGTTCATTGTA AATGTGATTGTTTGGTTGTTTTACAGTTGTGTTCATGTTTGCT