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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034604_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:297614826:297618473:1 gene:Zm00001d034604 gene_biotype:protein_coding transcript_biotype:protein_coding description:KH domain-containing protein SPIN1
Sequence

ATGTCGGGGCTCTACAGCCAGGGGTTCTCCCCTGCGCGAAACCTCTCCCCTCAGATTAGA
AGCAATCCGGACGCTGATAGTCAGTACCTGGCCGAGCTGCTCGCCGAACACCACAAACTG
GGGCCCTTCATGCAGGTGCTGCCCGTATGCAACAAGCTGCTGAGCCAAGAGATTATGCGG
GTATCAAGCATTGTGCACAACCATGGATTTGGCGATTTCGACAGGCATCGGTTTAGAAGT
CCTAGTCCAATGTCTTCTCCAAACCCTAGAGCTAATCTCCCTGGCAATGGGTTCAGTCCT
TGGAGCGGACTACAAGAGAGATTAGGTTTTCCTCAAGGAACCAGCATGGACTGGCAAGGA
GCACCCCCAAGTCCTAGCTCCCATGTTGTAAAGAAGATTCTTCGTCTGGAGGTTCCAGTT
GATTCTTATCCGAATTTCAATTTTGTGGGGCGCATTTTAGGACCTAGAGGTAATTCTCTA
AAGCGAGTAGAAGCATCCACTGGGTGTCGTGTTTTCATTAGAGGAAAGGGTTCCATCAAA
GATTCAGGGAAGGAGGACAAACTACGAGGAAAACCGGGCTATGAGCACCTGAGTGATCCG
CTGCATATCTTGATAGAGGCCGAGTTCCCTGCCAGTATCATCGATGCAAGGCTGAGACAA
GCACAGGAGATTATAGAAGAATTGCTTAAACCAGTGGACGAGTCCCAAGATCTCTACAAA
AGGCAGCAGCTCAGGGAGCTGGCAATGCTGAACTCAACCCTGAGAGAGGACAGCCCTCAT
CCTGGGAGTGTCTCTCCATTCAGCAACGGTGGCATGAAGCGTGCGAAAACAGGACAGTAG

Peptide Sequence

PEP ID

Zm00001d034604_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:297614826:297618473:1 gene:Zm00001d034604 transcript:Zm00001d034604_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:KH domain-containing protein SPIN1
Sequence

MSGLYSQGFSPARNLSPQIRSNPDADSQYLAELLAEHHKLGPFMQVLPVCNKLLSQEIMR
VSSIVHNHGFGDFDRHRFRSPSPMSSPNPRANLPGNGFSPWSGLQERLGFPQGTSMDWQG
APPSPSSHVVKKILRLEVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIK
DSGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRQAQEIIEELLKPVDESQDLYK
RQQLRELAMLNSTLREDSPHPGSVSPFSNGGMKRAKTGQ

Transcript Sequence

Transcript ID

Zm00001d034604_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:297614826:297618473:1 gene:Zm00001d034604 gene_biotype:protein_coding transcript_biotype:protein_coding description:KH domain-containing protein SPIN1
Sequence

ATCTCCTCCACTTCCTTCCTGGGCTCTGGGCTACGTATTATCCATCCGTCTCAGTCACCT
CGCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCGATTGCGGCCCTCACTCGCCATGTCGG
GGCTCTACAGCCAGGGGTTCTCCCCTGCGCGAAACCTCTCCCCTCAGATTAGAAGCAATC
CGGACGCTGATAGTCAGTACCTGGCCGAGCTGCTCGCCGAACACCACAAACTGGGGCCCT
TCATGCAGGTGCTGCCCGTATGCAACAAGCTGCTGAGCCAAGAGATTATGCGGGTATCAA
GCATTGTGCACAACCATGGATTTGGCGATTTCGACAGGCATCGGTTTAGAAGTCCTAGTC
CAATGTCTTCTCCAAACCCTAGAGCTAATCTCCCTGGCAATGGGTTCAGTCCTTGGAGCG
GACTACAAGAGAGATTAGGTTTTCCTCAAGGAACCAGCATGGACTGGCAAGGAGCACCCC
CAAGTCCTAGCTCCCATGTTGTAAAGAAGATTCTTCGTCTGGAGGTTCCAGTTGATTCTT
ATCCGAATTTCAATTTTGTGGGGCGCATTTTAGGACCTAGAGGTAATTCTCTAAAGCGAG
TAGAAGCATCCACTGGGTGTCGTGTTTTCATTAGAGGAAAGGGTTCCATCAAAGATTCAG
GGAAGGAGGACAAACTACGAGGAAAACCGGGCTATGAGCACCTGAGTGATCCGCTGCATA
TCTTGATAGAGGCCGAGTTCCCTGCCAGTATCATCGATGCAAGGCTGAGACAAGCACAGG
AGATTATAGAAGAATTGCTTAAACCAGTGGACGAGTCCCAAGATCTCTACAAAAGGCAGC
AGCTCAGGGAGCTGGCAATGCTGAACTCAACCCTGAGAGAGGACAGCCCTCATCCTGGGA
GTGTCTCTCCATTCAGCAACGGTGGCATGAAGCGTGCGAAAACAGGACAGTAGAGAAAAC
AACTATGCTCCCATATCTGGCCCCGTCGTCATGGGAACGCCATGGGCATGCGTGAAGGAA
GGCCATGCGCCTTCGCTGGCGGAGTCCGGTATCTTCTGCTAGCTTTCACCTCCGGACAGG
GGAAAGATGAGATGAGATGAGATAGTCGCGGACCCTTGGTTGGATCCGGCGTTGGTTGTT
GTATGGTCTAGAACATTCGTTCTATTTGTTATTGACGGTTAACCCTAGTATGTTGGTGAG
CTGCAACCTGCAAACTGCATGGTAAACTAGCTAGAGAGGCCTGCTGAGTATGTGAGCTTT
AGGTCTTTTATTGACATTGTATTATAACCTTTTTAACATTATGGAGTTGCAAAAATAAAA
AAAAATAAGGGACATAGCTTTGT