Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034602_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:1:297605445:297611285:-1 gene:Zm00001d034602 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brown midrib2 description: brown midrib2
Sequence	ATGATGCACCTGACATGTACAAACATGCCAGTAGAGAAGATTGACCATGCCTTGGAAACC ATCAAATCCAATGGGATTCAAAATGTTTTGGCCCTCAGAGGGGATCCTCCACATGGGCAA GACAAATTTGTGCAAGTTGAAGGCGGATTTGCTTGTGCTCTTGATTTGGTGCAGCATATT AGAGCCAAGTACGGTGATTATTTTGGCATAACTGTAGCTGGTTATCCAGAGGCACACCCT GATGCGATACAAGGCGAGGGAGGTGCTACATTGGAAGCATATAGCAATGATCTTGCGTAC TTGAAGAGAAAGGTTGATGCTGGTGCTGACCTTATTGTTACACAACTTTTCTATGATACC GACATCTTTCTCAAGTTTGTGAATGACTGCCGCCAAATTGGTATTACTTGTCCCATTGTT CCTGGCATAATGCCAATAAATAACTACAAAGGTTTCCTGCGCATGACTGGGTTCTGCAAA ACTAAGATACCTTCTGAGATCACTGCTGCACTAGATCCTATCAAAGACAATGAGGAGGCT GTTAGACAATATGGAATCCACCTTGGAACTGAGATGTGCAAGAAAATTCTTGCTACTGGC ATTAAGACTTTGCACCTTTACACACTAAACATGGACAAGTCTGCTATAGGAATTTTGATG AATCTTGGATTAATTGAGGAGTCCAAGGTTTCAAGGCCATTACCTTGGAGGCCAGCGACT AATGTTTTCCGTGTTAAAGAGGATGTTCGACCTATATTCTGGGCCAACAGACCAAAGAGC TATCTTAAAAGGACATTAGGTTGGGATCAGTATCCCCATGGACGGTGGGGTGATTCTCGG AACCCATCATATGGAGCACTTACTGACCACCAGTTCACAAGACCACGAGGCCGTGGTAAG AAGCTCCAAGAGGAATGGGCTGTTCCACTGAAATCTGTGGAGGACATTAGTGAGCGCTTC ACAAACTTCTGTCAAGGGAAACTCACAAGCAGCCCATGGTCAGAATTGGACGGTCTTCAA CCAGAGACAAAGATTATCGATGACCAGTTGGTGAATATTAACCAGAAGGGTTTCCTTACA ATTAACAGCCAACCTGCTGTAAATGGAGAGAAATCCGACTCGCCTACTGTTGGTTGGGGT GGTCCTGGAGGCTACGTTTATCAGAAGGCCTACCTCGAATTCTTCTGCGCAAAGGAGAAG TTGGACCAACTAATTGAGAAGATCAAAGCATTCCCTTCTCTCACTTACATTGCTGTGAAC AAGGATGGAGAAACATTCTCCAATATTTCACCGAACGCCGTGAATGCTGTCACGTGGGGT GTTTTCCCTGGCAAGGAGATTATCCAGCCTACGGTTGTGGATCATGCAAGTTTTATGGTT TGGAAGGACGAAGCATTTGAAATCTGGACTCGGGGGTGGGGTTGCATGTTCCCTGAGGGT GATTCATCGAGGGAGCTACTAGAGAAGGTTCAGAAGACCTACTACCTGGTCAGCCTCGTT GACAACGACTACGTCCAGGGGGACCTGTTTGCTGCCTTCAAGATCTGA

Peptide Sequence

PEP ID	Zm00001d034602_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:1:297605445:297611285:-1 gene:Zm00001d034602 transcript:Zm00001d034602_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brown midrib2 description: brown midrib2
Sequence	MMHLTCTNMPVEKIDHALETIKSNGIQNVLALRGDPPHGQDKFVQVEGGFACALDLVQHI RAKYGDYFGITVAGYPEAHPDAIQGEGGATLEAYSNDLAYLKRKVDAGADLIVTQLFYDT DIFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPSEITAALDPIKDNEEA VRQYGIHLGTEMCKKILATGIKTLHLYTLNMDKSAIGILMNLGLIEESKVSRPLPWRPAT NVFRVKEDVRPIFWANRPKSYLKRTLGWDQYPHGRWGDSRNPSYGALTDHQFTRPRGRGK KLQEEWAVPLKSVEDISERFTNFCQGKLTSSPWSELDGLQPETKIIDDQLVNINQKGFLT INSQPAVNGEKSDSPTVGWGGPGGYVYQKAYLEFFCAKEKLDQLIEKIKAFPSLTYIAVN KDGETFSNISPNAVNAVTWGVFPGKEIIQPTVVDHASFMVWKDEAFEIWTRGWGCMFPEG DSSRELLEKVQKTYYLVSLVDNDYVQGDLFAAFKI

Transcript Sequence

Transcript ID	Zm00001d034602_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:297605445:297611285:-1 gene:Zm00001d034602 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brown midrib2 description: brown midrib2
Sequence	GCTCCTGCCTCGCCTCACCACCATTAGAGCGCGCGCGCCAAGCTCGTGGTGAGGTTTTCG AGATGAAGGTTATCGAGAAGATCCTGGAGGCGGCGGGGGATGGCCGGACGGCGTTCTCGT TCGAGTACTTCCCTCCCAAGACGGAGGAGGGGGTCGAGAACCTGTTCGAGCGGATGGACC GCATGGTGGCGCACGGCCCCTCCTTCTGCGACATCACCTGGGGCGCCGGGGGATCCACCG CTGACCTTACCCTCGAAATCGCCAACCGTATGCAGAACATGGTACGTGTCGTGCGGCTAC CTCGCTCGCGCTCGATCCACTGCGCGCGATCTGATCTGATCTGTTTCGGCACCGGGAAGT GTTAGCCTGAGTGCCGGCTTCGGTTAGATCTGCCTAGGTGCGGGGTAATGCGTCGGCGGA CGTCGCGATATGCATTCGTTTTGTTGTGTCGGTAACGGTTATGGCCTTTGGGTAATTAGA TTTCCTGGATTGGTTCCGAGCGAGAGGGAATGCGTTTGGTCAATGCCGGGATTTTGGGTG GTGGTTGCTCTGGTTGAGTTCGAATTAGTGTGAGTTTGGGCTAAATTCAAAAATCGTGTT TATATAATCCAGCTTTAGACCATGTTTGTTTACCCTCTACTCTAGAGTACATAATCCAGC TTATATAAGTTGAGAGGTAAACAAACAACACAGATTATTAGGTGGATTATGTTATCTAGA TACCTGGATTATGATAATCTATAAGCATGTCAATAGGTGTTTATATAATCCATAAGCTGG AATGCTGGATTATATAATCCTGGAAGGAAACAAACAAGGCCTTAATGCTATTCACGTCAC GATATGCATTCGTTTTGTTGTGTCGGTAACGGTTATGGCCTTTGGGTAATTAGATTTCCT GGATTGGTTCCGAGCGAGAGGGAATGCGTTTGGTCAATGCCGGGATTTTGGGTGGTGGTT GCTCTGGTTGAGTTCGAATTAGTGTGAGTTTGGGCTAAATTCAAAATTCGTGCCCCACAC TGGAGACCTGGTGGCGATTACATTAACTTTATTTTATCAATTGTTATTGTGTTCATTCTA ATCCTTTTTTGTTTCACAATTTAGATTGTTCTTAGTTTATCAGTTTAAAACTGATGGGAT GCATGATACGGTTATGTTAGGGAGATAATTGGATTTTTGCCACTCACAATGTTGTCTTTG TCTATGAATTGTGGGTCCAGCTGGGTCTATGAAATGTGGGCCTGATGGCAATTTTACAAA CTTGTTTCTTGCTGATGGCAAATATCAGAATCTCTCTATGTTAGGATGGCATCGTGAGTG CAAAATGGTGGCTTTTGAGCACTAATGCATTTTATGTTATTTATTCACTTGGTACTGCGA GTTTGTCATGCGTACAGTGAGTACTGATCATTGTTAAGAGGAAGTTTGTGCCTAATGCAC AGAACAGTTTTCTGGAAACATTAGTATAATCTTGGTTCGACTTGATCTTCCAGCTTTAGG CTATGTTTGTTTACCCTCTACTCTAGAGTACATAATCCAGCTTATATAAGTTGAGAGGTA AACAAACAACACAGATTATTAGGTGGATTATGTTATCTAGATACCTGGATTCTGATAATC TATAAGCATGTCAATAGGTGTTTATATAATCCATAAGCTGGATTATATAATCCTGGAAGG AAACAAACAGGGCCTTAATGCTATTCTGTTCTGAACCGCTTCAATTTTATTAAACTAATT TATTTCTTATAATTCCTCTGCATCTTTGATGTATCCCTTGCACCGCATGCATTAGATGCT TATAATATTTTATATTGGTTCCGTTTTGTAGGTGTGTGTGGAAACCATGATGCACCTGAC ATGTACAAACATGCCAGTAGAGAAGATTGACCATGCCTTGGAAACCATCAAATCCAATGG GATTCAAAATGTTTTGGCCCTCAGAGGGGATCCTCCACATGGGCAAGACAAATTTGTGCA AGTTGAAGGCGGATTTGCTTGTGCTCTTGATTTGGTGCAGCATATTAGAGCCAAGTACGG TGATTATTTTGGCATAACTGTAGCTGGTTATCCAGAGGCACACCCTGATGCGATACAAGG CGAGGGAGGTGCTACATTGGAAGCATATAGCAATGATCTTGCGTACTTGAAGAGAAAGGT TGATGCTGGTGCTGACCTTATTGTTACACAACTTTTCTATGATACCGACATCTTTCTCAA GTTTGTGAATGACTGCCGCCAAATTGGTATTACTTGTCCCATTGTTCCTGGCATAATGCC AATAAATAACTACAAAGGTTTCCTGCGCATGACTGGGTTCTGCAAAACTAAGATACCTTC TGAGATCACTGCTGCACTAGATCCTATCAAAGACAATGAGGAGGCTGTTAGACAATATGG AATCCACCTTGGAACTGAGATGTGCAAGAAAATTCTTGCTACTGGCATTAAGACTTTGCA CCTTTACACACTAAACATGGACAAGTCTGCTATAGGAATTTTGATGAATCTTGGATTAAT TGAGGAGTCCAAGGTTTCAAGGCCATTACCTTGGAGGCCAGCGACTAATGTTTTCCGTGT TAAAGAGGATGTTCGACCTATATTCTGGGCCAACAGACCAAAGAGCTATCTTAAAAGGAC ATTAGGTTGGGATCAGTATCCCCATGGACGGTGGGGTGATTCTCGGAACCCATCATATGG AGCACTTACTGACCACCAGTTCACAAGACCACGAGGCCGTGGTAAGAAGCTCCAAGAGGA ATGGGCTGTTCCACTGAAATCTGTGGAGGACATTAGTGAGCGCTTCACAAACTTCTGTCA AGGGAAACTCACAAGCAGCCCATGGTCAGAATTGGACGGTCTTCAACCAGAGACAAAGAT TATCGATGACCAGTTGGTGAATATTAACCAGAAGGGTTTCCTTACAATTAACAGCCAACC TGCTGTAAATGGAGAGAAATCCGACTCGCCTACTGTTGGTTGGGGTGGTCCTGGAGGCTA CGTTTATCAGAAGGCCTACCTCGAATTCTTCTGCGCAAAGGAGAAGTTGGACCAACTAAT TGAGAAGATCAAAGCATTCCCTTCTCTCACTTACATTGCTGTGAACAAGGATGGAGAAAC ATTCTCCAATATTTCACCGAACGCCGTGAATGCTGTCACGTGGGGTGTTTTCCCTGGCAA GGAGATTATCCAGCCTACGGTTGTGGATCATGCAAGTTTTATGGTTTGGAAGGACGAAGC ATTTGAAATCTGGACTCGGGGGTGGGGTTGCATGTTCCCTGAGGGTGATTCATCGAGGGA GCTACTAGAGAAGGTTCAGAAGACCTACTACCTGGTCAGCCTCGTTGACAACGACTACGT CCAGGGGGACCTGTTTGCTGCCTTCAAGATCTGATTATGCTCTCATGGTCTGTATTGTTG TATGGTTGGACCCAACAATATTCTTGCATCCCCGACTACAGGTCTGATCGCCATGAAAGC TTCTGTTCATT