Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034581_T018
CDS Infomation

cds chromosome:B73_RefGen_v4:1:297039877:297047931:1 gene:Zm00001d034581 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGGGTTCGAGGGGCTGGTGCGGGATGGGTCGTTCAAGTGGGGCCTCCCCCGCCGC
GGGGACACGGCCATGGACGACGGCGGCGACGACGACGGCTCCCTCTCCGTGCAGCGCTCC
TCCATCGCTGGCCTTTCCTTCAAGGCCAACGCCGTCGTCGCCCGCTGCTCCCGAATCCTT
GGCGTTTCTACCAATGATCTACAAAATAACTTTGATAAGCAAGCATCTGATTCCATAAAG
CAGCCAAAAAGCTACGCAAGAAATTTTTTGGAGTACTGCTGCTTCCTGGCACTTGCTCAG
ATATCACAAGTGACAGGGTATCTTGCTGACAAGAGCTTTCGCCGCTTGTCTTTTGACATG
ATGTTAGCTTGGGAGGTTCCCTATTCTTCAAGCCAGCTCACTGTTAAGGCTGAGGTAGAT
AGCACAGTTAGCTCAGAAGCTTTTACAAGAATAGCACCTGCCATCCCAACCATTGCTGAT
GTAGTAACTTGTGCAAATCTCTTTGATGTACTTTCATGTTCGAGCGGAGGCCGTCTTTCA
TTTTCTGTATATGAGAAGTACCTTTCAGAATTGGACAGAGCGGTTAAAAAGATGAAGACA
CAATCTGAGTCATCACTTCTATCAAACTTTCGGTCTCAGAGAGGAGAAAGGATTCTGGAA
GTTGATGGTACATTGACAACACAACCAGTACTTGAACATGTGGGTATTTCAACGTGGCCA
GGAAGATTAATACTCACAGATCATGCCCTTTACTTTGAAGCTCTTCGGGTTGTTACCTAT
GATAAGCCCAAAGTTTATGAGCTTGCAGAAGATTTAAAGCAGGTTGTTAAACCTGAGCTG
ACTGGTCCATGGGGGTCACGTCTCTTTGACAAAGCCGTTATGTACAAATCAACAACCTTA
ACAGAACCTGTGATCATAGAATTTCCGGAGTTAGCTGGCCATTCTCGCCGAGATTATTGG
CTGGCCATTATATCAGAAGTACTTTATGCCCATAGATTTGTTAGGAAGTTTGATATAAGC
GGAATTGACAAAGAGGAAACAATTCTGAAAGCAGTACTTGGTATTATGAGGTTACAAGCC
ATTGAAGAGTTACATTTTGAAGTTCCAAATCGTTATGAATCTCTTTTGTTGTTCAGCCAA
TGTGACAAACTTCCTGGAGGTGATGTTATACTTGAAACATTAGCCAGTTCTATAGCATCA
AGAACTTCAGATCGAACTAACCAACCTGGCACAAGTAGAGGAATGCATGCTGTCCTGTCA
AACCTGGGCATGGTATCACCAGTTAATAGTGGTGAGCGTTTGTTTGTTGGTGAGATTGTT
GTTGGGGAAATTAGTGCCTTGCAGAAGGCTGTTACTGATTCAATGAACAACTATAAGAAA
GTTGAACTGGCCCAAGCGTCGGTTGATGGAGTCAAAGTTGATGGTCTTGATACAAACTTA
GCAGTAATGAAGGTAAACTACTAA

Peptide Sequence

PEP ID

Zm00001d034581_P018
PEP Infomation

pep chromosome:B73_RefGen_v4:1:297039877:297047931:1 gene:Zm00001d034581 transcript:Zm00001d034581_T018 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEGFEGLVRDGSFKWGLPRRGDTAMDDGGDDDGSLSVQRSSIAGLSFKANAVVARCSRIL
GVSTNDLQNNFDKQASDSIKQPKSYARNFLEYCCFLALAQISQVTGYLADKSFRRLSFDM
MLAWEVPYSSSQLTVKAEVDSTVSSEAFTRIAPAIPTIADVVTCANLFDVLSCSSGGRLS
FSVYEKYLSELDRAVKKMKTQSESSLLSNFRSQRGERILEVDGTLTTQPVLEHVGISTWP
GRLILTDHALYFEALRVVTYDKPKVYELAEDLKQVVKPELTGPWGSRLFDKAVMYKSTTL
TEPVIIEFPELAGHSRRDYWLAIISEVLYAHRFVRKFDISGIDKEETILKAVLGIMRLQA
IEELHFEVPNRYESLLLFSQCDKLPGGDVILETLASSIASRTSDRTNQPGTSRGMHAVLS
NLGMVSPVNSGERLFVGEIVVGEISALQKAVTDSMNNYKKVELAQASVDGVKVDGLDTNL
AVMKVNY

Transcript Sequence

Transcript ID

Zm00001d034581_T018
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:297039877:297047931:1 gene:Zm00001d034581 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GATGGAGGGGTTCGAGGGGCTGGTGCGGGATGGGTCGTTCAAGTGGGGCCTCCCCCGCCG
CGGGGACACGGCCATGGACGACGGCGGCGACGACGACGGCTCCCTCTCCGTGCAGCGCTC
CTCCATCGCTGGCCTTTCCTTCAAGGCCAACGCCGTCGTCGCCCGCTGCTCCCGAATCCT
TGGCGTTTCTACCAATGATCTACAAAATAACTTTGATAAGCAAGCATCTGATTCCATAAA
GCAGCCAAAAAGCTACGCAAGAAATTTTTTGGAGTACTGCTGCTTCCTGGCACTTGCTCA
GATATCACAAGTGACAGGGTATCTTGCTGACAAGAGCTTTCGCCGCTTGTCTTTTGACAT
GATGTTAGCTTGGGAGGTTCCCTATTCTTCAAGCCAGCTCACTGTTAAGGCTGAGGTAGA
TAGCACAGTTAGCTCAGAAGCTTTTACAAGAATAGCACCTGCCATCCCAACCATTGCTGA
TGTAGTAACTTGTGCAAATCTCTTTGATGTACTTTCATGTTCGAGCGGAGGCCGTCTTTC
ATTTTCTGTATATGAGAAGTACCTTTCAGAATTGGACAGAGCGGTTAAAAAGATGAAGAC
ACAATCTGAGTCATCACTTCTATCAAACTTTCGGTCTCAGAGAGGAGAAAGGATTCTGGA
AGTTGATGGTACATTGACAACACAACCAGTACTTGAACATGTGGGTATTTCAACGTGGCC
AGGAAGATTAATACTCACAGATCATGCCCTTTACTTTGAAGCTCTTCGGGTTGTTACCTA
TGATAAGCCCAAAGTTTATGAGCTTGCAGAAGATTTAAAGCAGGTTGTTAAACCTGAGCT
GACTGGTCCATGGGGGTCACGTCTCTTTGACAAAGCCGTTATGTACAAATCAACAACCTT
AACAGAACCTGTGATCATAGAATTTCCGGAGTTAGCTGGCCATTCTCGCCGAGATTATTG
GCTGGCCATTATATCAGAAGTACTTTATGCCCATAGATTTGTTAGGAAGTTTGATATAAG
CGGAATTGACAAAGAGGAAACAATTCTGAAAGCAGTACTTGGTATTATGAGGTTACAAGC
CATTGAAGAGTTACATTTTGAAGTTCCAAATCGTTATGAATCTCTTTTGTTGTTCAGCCA
ATGTGACAAACTTCCTGGAGGTGATGTTATACTTGAAACATTAGCCAGTTCTATAGCATC
AAGAACTTCAGATCGAACTAACCAACCTGGCACAAGTAGAGGAATGCATGCTGTCCTGTC
AAACCTGGGCATGGTATCACCAGTTAATAGTGGTGAGCGTTTGTTTGTTGGTGAGATTGT
TGTTGGGGAAATTAGTGCCTTGCAGAAGGCTGTTACTGATTCAATGAACAACTATAAGAA
AGTTGAACTGGCCCAAGCGTCGGTTGATGGAGTCAAAGTTGATGGTCTTGATACAAACTT
AGCAGTAATGAAGGTAAACTACTAAACCCTAAACAATCATTTTCGCCTTTCATTTATTTA
CTTTAGATTGTGTTGTGCTGTCACTTAGTTCCTGTAAAGCAGGCTCTCGTTTCATTCTGT
TTCCTGTTTCTTCTATTTAATCCTTAAACATGCTCAGGAATTGTTATCCCCGGTAAGTGA
GCTTTGGAGGGTTTTGCTATTGCTCACATCATGGGACGAGCCTATGAAGTCCATGTTGTT
TTGCTTCCTATTCTCTTATATTATCATCAGGTATGCTACTTTCTCCATGGATATTCATAT
GATAAGTTTATTTTAGAGATGCTGCTTTGCCATAGTAGCAACTATTGGCTATTTTATGTG
TAAGGGAAGTTCATGTTGAGATGTAATAACTAAGATTCTAAGAAAGTAGCTCATGCAACA
ATGGGCCTATTAAAATAAACTTATGTGACTGCTAGCAATTATTGACCGGACTTATGTTGA
TCGGCAAGGCGATTAATCACACCATATCGACGATTAGTCGGACGATAAGGACGATCAGCT
CCTCTGATCGAATCGACTCCTCTAATCGAGTACTTAGAACCGATCAGACCGACTAATCGT
GACTAATCACGATTAGTCGGACGATATGAAAGCACTGCTCCGAATCATCAATATGAAAGA
AATAACATCTAGATACACTCATATGCATGTGCGCACTCTCATCTCATTTCTTCGTTGGGT
CCTGGGCCAATCTATTTCCTTATAGGTACTTCAGTGACAACTGACAACTTGTACTGTAGC
TTTAGTAATGTGTACCAGAGCTGATGAATGTGAATGATGTAGCTAGTTAATATTACTGGG
CCAATAATAGTCTAAGAGTGTGTTCAGCCAAGTGCAATTCTAAAACATTTTGGTCAATTT
GACGGTCCACCATTGATACTGATTCTTTTAGGTCAATGGAATGTGGACCAAGAGCAATTA
GCAATCCAGATTTCCTTAGCACAAATCAGTTTTCAGTTTCTTTGTTAGCACTCTATCCTT
TGGGAGGAAAGAGCTGTTTAGACTTCAGAAACATATCACAACAAAGCGAATATGGTAACT
ATGCTTGATTGGCAGTAATTGACTCTTCAGTTGGTTTATCACTCATACATTTTATATGGA
GCTACATATATGGTTGGCAAAGGAATAATGTAGTTTTATACTAGTAGTCTGAACTGTATA
TTTAAATTCTCAGACATATTAATCTTAATGAGATTTGCTAATAGTTCATAATTTGCTACA
TGTCATCAATTCTCCTTAGATTTCTTCACATTTGTGATGTCTCTATGTTTCTTTGCTGAC
ACAGGGGGTGGGTAATCTATTTTATTGTCACGGTACTATTGTTTTCAGCAACTTTTATGT
TTCTCACAAGATTAACTAATCAAGGAAAGCAAATGAGTGAGGTAAAGGTGGTATCCCCAC
CTCCACTGAACACAATGGAGCAGCTCCTAGCTGTTCAAAATGCCATTTCTAAAATTGAGG
AGCTTGTCCAAGATGCAAATATTGTTCTTCTGAAGATAAGAGCTCTATTGTTGGCTTTTC
CATCCCAGGCGACGGACAGGGCTATTCTGGCATTGGTACTGATGGCCCTGAGCCTTGCCA
TCGTTCCCACAAAAGTGCTTCTGCTGCTGGTGTTTCTGGAGGTATCCACGAACAACTCAC
CACTACGAAGAGCAAGCACAGAAAGGTGTACCAGAAGGTTGAGAGAGTGGTGGTTCAGCA
TACCTGCAGCTCCAGTGGTGGTGGAGAAAGAGAAAGAGGACAAGAAAACTAGATGATACA
TCCAATGTAATCTTTATGTTGCTTGGCTGATACGTTGTGTAACGTATCAGCCAATGCCCA
CCTTTGTACAAAGACCGCAATATCAACAACGAGGGGCAGTTTCAATGAAGATTTCATCTC
ACTTGTACCACCTGCCCTGTTTACATGGCTCTTGATGCTTTGTTGCAAGTTGACTAGAGC
TGAGGCCGGTGTCAATCGCCGCTAATAACACAAATCCCTTTCTCTGGGTTGGACATATCG
CCGTGCGGACCTGCGCCCCTTCGTTTGTAACATGAACAGTATTGATTCTTCGATATTATG
GGATTGCTTCTC